Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO423G0166 Papaver somniferum HOM05D004340 ORTHO05D006363 8.5e-81 303.5 143 100.0
PSO832G0091 Papaver somniferum HOM05D004340 ORTHO05D006363 4.1e-35 151.8 105 75.2
PSO063G1986 Papaver somniferum HOM05D004340 ORTHO05D006363 2.7e-34 149.1 105 74.3
Gohir.D13G076900 Gossypium hirsutum HOM05D004340 ORTHO05D006363 1.6e-23 113.2 110 59.1
Gorai.013G087900 Gossypium raimondii HOM05D004340 ORTHO05D006363 1.6e-23 113.2 110 59.1
MBI05_g36413_MAGBIO Magnolia biondii HOM05D004340 ORTHO05D006363 1.6e-23 113.2 115 57.4
TAR629G2604 Trochodendron aralioides HOM05D004340 ORTHO05D006363 2.8e-23 112.5 110 59.1
Gohir.A13G077700 Gossypium hirsutum HOM05D004340 ORTHO05D006363 4.7e-23 111.7 115 57.4
Nn4g23232 Nelumbo nucifera HOM05D004340 ORTHO05D006363 6.2e-23 111.3 109 59.6
Thecc.02G342300 Theobroma cacao HOM05D004340 ORTHO05D006363 8.0e-23 110.9 110 58.2
GSVIVG01019948001 Vitis vinifera HOM05D004340 ORTHO05D006363 8.0e-23 110.9 115 60.0
Duzib251G0421 Durio zibethinus HOM05D004340 ORTHO05D006363 1.1e-22 110.5 110 58.2
Rhsim10G0119600 Rhododendron simsii HOM05D004340 ORTHO05D006363 1.4e-22 110.2 110 60.0
QL03p068099 Quercus lobata HOM05D004340 ORTHO05D006363 1.8e-22 109.8 110 56.4
Rhsim10G0051900 Rhododendron simsii HOM05D004340 ORTHO05D006363 1.8e-22 109.8 110 59.1
Dinv16674 Davidia involucrata HOM05D004340 ORTHO05D006363 2.3e-22 109.4 109 59.6
COL.COLO4_27998 Corchorus olitorius HOM05D004340 ORTHO05D006363 3.1e-22 109.0 110 57.3
RcHm_v2.0_Chr4g0439421 Rosa chinensis HOM05D004340 ORTHO05D006363 5.2e-22 108.2 110 56.4
CSS0018825 Camellia sinensis var. sinensis HOM05D004340 ORTHO05D006363 8.9e-22 107.5 110 58.2
Prupe.1G035400 Prunus persica HOM05D004340 ORTHO05D006363 1.2e-21 107.1 110 56.4
Potri.008G089600 Populus trichocarpa HOM05D004340 ORTHO05D006363 4.4e-21 105.1 110 55.5
FvH4_5g29350 Fragaria vesca HOM05D004340 ORTHO05D006363 7.5e-21 104.4 110 55.5
FAN13G0065 Fragaria x ananassa HOM05D004340 ORTHO05D006363 7.5e-21 104.4 110 55.5
FAN18G2257 Fragaria x ananassa HOM05D004340 ORTHO05D006363 7.5e-21 104.4 110 55.5
Atru.chr10.1247 Acer truncatum HOM05D004340 ORTHO05D006363 9.8e-21 104.0 110 54.5
Atru.chr11.1746 Acer truncatum HOM05D004340 ORTHO05D006363 9.8e-21 104.0 110 54.5
Manes.01G034000 Manihot esculenta HOM05D004340 ORTHO05D006363 9.8e-21 104.0 110 55.5
Peaxi162Scf00222g00716 Petunia axillaris HOM05D004340 ORTHO05D006363 9.8e-21 104.0 110 55.5
FAN04G3196 Fragaria x ananassa HOM05D004340 ORTHO05D006363 1.7e-20 103.2 110 55.5
Sc11g0002100 Simmondsia chinensis HOM05D004340 ORTHO05D006363 1.7e-20 103.2 110 53.6
Cfa008953 Carpinus fangiana HOM05D004340 ORTHO05D006363 2.2e-20 102.8 110 53.6
CiPaw.05G131900 Carya illinoinensis HOM05D004340 ORTHO05D006363 2.2e-20 102.8 110 53.6
Haze_11982 Corylus avellana HOM05D004340 ORTHO05D006363 2.2e-20 102.8 110 53.6
MD16G1069200 Malus domestica HOM05D004340 ORTHO05D006363 4.9e-20 101.7 110 54.5
Actinidia33215 Actinidia chinensis HOM05D004340 ORTHO05D006363 6.4e-20 101.3 110 56.4
Ciclev10030675m.g Citrus clementina HOM05D004340 ORTHO05D006363 1.1e-19 100.5 110 54.5
ECA233G3760 Erigeron canadensis HOM05D004340 ORTHO05D006363 1.4e-19 100.1 106 54.7
ATR0564G449 Amborella trichopoda HOM05D004340 ORTHO05D006363 2.4e-19 99.4 110 52.7
Sabra08G0067000 Salix brachista HOM05D004340 ORTHO05D006363 2.4e-19 99.4 110 53.6
CANSAT64G1884 Cannabis sativa HOM05D004340 ORTHO05D006363 3.2e-19 99.0 109 51.4
Oeu005760.1 Olea europaea HOM05D004340 ORTHO05D006363 3.2e-19 99.0 115 54.8
CAN.G1335.16 Capsicum annuum HOM05D004340 ORTHO05D006363 4.1e-19 98.6 110 55.5
SGA_v2.0_scaffold172G38951 Striga asiatica HOM05D004340 ORTHO05D006363 4.1e-19 98.6 108 54.6
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 4.1e-19 98.6 110 55.5
MSTRG.717 Avicennia marina HOM05D004340 ORTHO05D006363 7.0e-19 97.8 109 54.1
PGR102G3073 Punica granatum HOM05D004340 ORTHO05D006363 7.0e-19 97.8 110 51.8
Eucgr.I00217 Eucalyptus grandis HOM05D004340 ORTHO05D006363 1.2e-18 97.1 110 52.7
arahy.Tifrunner.gnm1.ann1.AR8P07 Arachis hypogaea HOM05D004340 ORTHO05D006363 1.6e-18 96.7 110 50.9
arahy.Tifrunner.gnm1.ann1.MXBT1J Arachis hypogaea HOM05D004340 ORTHO05D006363 1.6e-18 96.7 110 50.9
Cc11_g12720 Coffea canephora HOM05D004340 ORTHO05D006363 1.6e-18 96.7 109 52.3
Nitab4.5_0000040g0090 Nicotiana tabacum HOM05D004340 ORTHO05D006363 1.6e-18 96.7 110 53.6
Cpa.g.sc1.50 Carica papaya HOM05D004340 ORTHO05D006363 2.1e-18 96.3 110 49.1
AUR62032818 Chenopodium quinoa HOM05D004340 ORTHO05D006363 2.1e-18 96.3 109 52.3
vmacro05308 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 2.1e-18 96.3 106 56.6
Aqoxy3G03456 Aquilegia oxysepala HOM05D004340 ORTHO05D006363 3.5e-18 95.5 109 53.2
EL10Ac6g13244 Beta vulgaris HOM05D004340 ORTHO05D006363 3.5e-18 95.5 114 50.9
AUR62005824 Chenopodium quinoa HOM05D004340 ORTHO05D006363 3.5e-18 95.5 109 51.4
Solyc05g007750.4 Solanum lycopersicum HOM05D004340 ORTHO05D006363 3.5e-18 95.5 110 53.6
Sopen05g003610 Solanum pennellii HOM05D004340 ORTHO05D006363 4.6e-18 95.1 110 52.7
PGSC0003DMG400018437 Solanum tuberosum HOM05D004340 ORTHO05D006363 4.6e-18 95.1 110 52.7
Lsat_1_v5_gn_8_50141 Lactuca sativa HOM05D004340 ORTHO05D006363 6.0e-18 94.7 106 53.8
CsaV3_5G025240 Cucumis sativus L. HOM05D004340 ORTHO05D006363 7.8e-18 94.4 110 51.8
Migut.L01267 Erythranthe guttata HOM05D004340 ORTHO05D006363 7.8e-18 94.4 114 50.9
Nitab4.5_0004300g0030 Nicotiana tabacum HOM05D004340 ORTHO05D006363 7.8e-18 94.4 110 53.6
THA.LOC104801804 Tarenaya hassleriana HOM05D004340 ORTHO05D006363 7.8e-18 94.4 105 50.5
TWI79G0307 Tripterygium wilfordii HOM05D004340 ORTHO05D006363 1.0e-17 94.0 108 52.8
DCAR_027428 Daucus carota HOM05D004340 ORTHO05D006363 1.3e-17 93.6 109 52.3
HanXRQChr12g0362121 Helianthus annuus HOM05D004340 ORTHO05D006363 1.7e-17 93.2 106 51.9
CARHR261990 Cardamine hirsuta HOM05D004340 ORTHO05D006363 2.3e-17 92.8 108 46.3
MELO3C002960.2 Cucumis melo HOM05D004340 ORTHO05D006363 3.0e-17 92.4 110 50.0
Prupe.1G191200 Prunus persica HOM05D004340 ORTHO05D006363 3.0e-17 92.4 110 49.1
Aa31LG10G13720 Aethionema arabicum HOM05D004340 ORTHO05D006363 3.9e-17 92.0 110 49.1
SalBow2G1648 Salvia bowleyana HOM05D004340 ORTHO05D006363 6.6e-17 91.3 108 51.9
CDE04G2617 Ceratophyllum demersum HOM05D003388 ORTHO05D003616 1.1e-16 90.5 111 48.6
Glyma.11G220500 Glycine max HOM05D004340 ORTHO05D006363 1.9e-16 89.7 110 49.1
HPP92_022008 Vanilla planifolia HOM05D004340 ORTHO05D006363 2.5e-16 89.4 106 50.0
VMungo1383G3199 Vigna mungo HOM05D004340 ORTHO05D006363 2.5e-16 89.4 109 46.8
Glyma.18G036900 Glycine max HOM05D004340 ORTHO05D006363 4.3e-16 88.6 110 50.0
Hund25218 Selenicereus undatus HOM05D004340 ORTHO05D006363 5.6e-16 88.2 109 49.5
TPR.G34046 Trifolium pratense HOM05D004340 ORTHO05D006363 5.6e-16 88.2 115 47.8
HPP92_021921 Vanilla planifolia HOM05D004340 ORTHO05D006363 5.6e-16 88.2 106 49.1
Sed0000698 Sechium edule HOM05D004340 ORTHO05D006363 7.3e-16 87.8 110 47.3
RcHm_v2.0_Chr1g0372981 Rosa chinensis HOM05D004340 ORTHO05D013606 9.5e-16 87.4 69 66.7
ClCG09G021920 Citrullus lanatus HOM05D004340 ORTHO05D006363 1.2e-15 87.0 110 47.3
Os04g0484800 Oryza sativa ssp. japonica HOM05D004340 ORTHO05D006363 1.2e-15 87.0 110 50.0
Phvul.001G233800 Phaseolus vulgaris HOM05D004340 ORTHO05D006363 1.2e-15 87.0 110 47.3
Lj1g0001827 Lotus japonicus HOM05D004340 ORTHO05D006363 1.6e-15 86.7 110 45.5
Psat7g160080 Pisum sativum HOM05D004340 ORTHO05D006363 1.6e-15 86.7 115 47.8
Ca_30738_v3 Cicer arietinum L. HOM05D004340 ORTHO05D006363 2.1e-15 86.3 117 47.9
Lj4g0013877 Lotus japonicus HOM05D004340 ORTHO05D006363 2.1e-15 86.3 110 44.5
Ca_18821_v3 Cicer arietinum L. HOM05D004340 ORTHO05D006363 2.8e-15 85.9 115 48.7
Sp7g01960 Schrenkiella parvula HOM05D004340 ORTHO05D006363 6.2e-15 84.7 105 45.7
Medtr4g082150 Medicago truncatula HOM05D004340 ORTHO05D006363 1.1e-14 84.0 110 45.5
vmacro11375 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 1.1e-14 84.0 89 56.2
A04p12890 Brassica napus HOM05D004340 ORTHO05D006363 1.4e-14 83.6 104 43.3
Thhalv10027638m.g Eutrema salsugineum HOM05D004340 ORTHO05D006363 1.4e-14 83.6 105 44.8
Lalb_Chr05g0220271 Lupinus albus HOM05D004340 ORTHO05D006363 1.8e-14 83.2 115 45.2
BcaB05g21922 Brassica carinata HOM05D004340 ORTHO05D006363 2.3e-14 82.8 105 41.9
BraA04t16952Z Brassica rapa HOM05D004340 ORTHO05D006363 2.3e-14 82.8 104 43.3
Medtr4g082265 Medicago truncatula HOM05D004340 ORTHO05D006363 2.3e-14 82.8 110 46.4
BraA02t04684Z Brassica rapa HOM05D004340 ORTHO05D006363 3.1e-14 82.4 101 41.6
BcaC03g13079 Brassica carinata HOM05D004340 ORTHO05D006363 5.2e-14 81.6 105 41.9
BolC2t06011H Brassica oleracea HOM05D004340 ORTHO05D006363 5.2e-14 81.6 105 41.9
Carub.0003s2628 Capsella rubella HOM05D004340 ORTHO05D006363 5.2e-14 81.6 105 42.9
Zm00001eb227040 Zea mays HOM05D004340 ORTHO05D006363 5.2e-14 81.6 110 45.5
Ah.03g134830 Amaranthus hybridus HOM05D004340 ORTHO05D006363 8.9e-14 80.9 144 40.3
BolC4t26245H Brassica oleracea HOM05D004340 ORTHO05D006363 8.9e-14 80.9 104 42.3
BcaB06g27417 Brassica carinata HOM05D004340 ORTHO05D006363 1.2e-13 80.5 108 41.7
Lj3A1035G45 Lonicera japonica HOM05D004340 ORTHO05D006363 1.2e-13 80.5 100 50.0
Medtr7g021880 Medicago truncatula HOM05D004340 ORTHO05D006363 1.2e-13 80.5 115 45.2
AL3G42300 Arabidopsis lyrata HOM05D004340 ORTHO05D006363 1.5e-13 80.1 106 42.5
C02p00140 Brassica napus HOM05D004340 ORTHO05D006363 2.0e-13 79.7 105 41.0
AT2G04660 Arabidopsis thaliana HOM05D004340 ORTHO05D006363 3.4e-13 79.0 105 41.0
C04p46590 Brassica napus HOM05D004340 ORTHO05D006363 3.4e-13 79.0 104 41.3
TPR.G5981 Trifolium pratense HOM05D004340 ORTHO05D006363 3.4e-13 79.0 115 44.3
TPR.G26175 Trifolium pratense HOM05D004340 ORTHO05D006363 5.8e-13 78.2 115 44.3
Aqoxy3G02559 Aquilegia oxysepala HOM05D004340 ORTHO05D006363 1.4e-11 73.6 111 45.9
unitig_747.g21183 Utricularia gibba HOM05D004340 ORTHO05D006363 6.0e-10 68.2 107 42.1
SEGI_17726 Sequoiadendron giganteum HOM05D004340 ORTHO05D006363 4.7e-07 58.5 45 60.0
AagrBONN_evm.TU.Sc2ySwM_344.3807 Anthoceros agrestis HOM05D004340 ORTHO05D006363 2.4e-06 56.2 111 35.1
Mapoly0122s0055 Marchantia polymorpha HOM05D004340 ORTHO05D006363 3.1e-06 55.8 113 37.2
SMO361G0530 Selaginella moellendorffii HOM05D004340 ORTHO05D006363 5.2e-06 55.1 111 34.2


User provided reference genes

Program Settings