Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 3.7e-123 444.9 225 100.0
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 5.6e-55 218.4 225 54.7
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.4e-53 213.8 168 65.5
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 1.8e-53 213.4 225 52.4
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 1.8e-53 213.4 226 54.9
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 5.3e-53 211.8 221 53.4
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 5.3e-53 211.8 223 51.6
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.2e-52 210.7 168 64.9
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 9.9e-52 207.6 182 59.3
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.3e-51 207.2 190 57.4
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 1.3e-51 207.2 227 50.7
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 1.7e-51 206.8 190 58.9
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.8e-51 205.7 224 52.7
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 6.4e-51 204.9 226 50.0
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 6.4e-51 204.9 228 50.0
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 1.1e-50 204.1 222 51.4
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 1.1e-50 204.1 221 52.9
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.4e-50 203.8 237 49.8
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 3.2e-50 202.6 196 55.6
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 3.2e-50 202.6 200 51.0
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 3.2e-50 202.6 155 64.5
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 7.1e-50 201.4 227 48.5
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.2e-49 200.7 186 55.4
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.6e-49 200.3 155 65.2
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.1e-49 199.9 186 55.4
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 2.1e-49 199.9 159 60.4
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 3.5e-49 199.1 195 52.8
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 6.0e-49 198.4 182 56.6
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 1.8e-48 196.8 182 57.1
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 3.9e-48 195.7 182 56.0
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 3.9e-48 195.7 180 55.6
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 3.9e-48 195.7 224 48.7
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 5.1e-48 195.3 183 55.7
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 6.7e-48 194.9 172 57.6
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 6.7e-48 194.9 223 48.4
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 1.1e-47 194.1 163 60.1
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 1.5e-47 193.7 182 56.0
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 1.5e-47 193.7 182 56.0
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 1.5e-47 193.7 182 56.0
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 1.5e-47 193.7 163 59.5
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.9e-47 193.4 163 60.1
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 3.3e-47 192.6 225 46.7
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 4.3e-47 192.2 180 57.8
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 4.3e-47 192.2 163 58.3
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 4.3e-47 192.2 159 56.0
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 2.1e-46 189.9 223 49.3
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 2.8e-46 189.5 145 64.8
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 2.8e-46 189.5 159 59.7
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 3.7e-46 189.1 173 57.2
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 3.7e-46 189.1 226 47.3
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 4.8e-46 188.7 223 47.5
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 4.8e-46 188.7 229 51.5
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 6.2e-46 188.3 129 70.5
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 8.1e-46 188.0 160 58.8
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.1e-45 187.6 182 53.3
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 1.1e-45 187.6 226 48.2
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.1e-45 187.6 160 59.4
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 2.4e-45 186.4 155 61.9
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 4.0e-45 185.7 225 46.7
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 4.0e-45 185.7 228 47.8
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 5.3e-45 185.3 158 58.9
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 6.9e-45 184.9 171 57.3
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.2e-44 184.1 221 49.3
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 1.5e-44 183.7 153 61.4
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 2.0e-44 183.3 195 49.7
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 2.0e-44 183.3 145 63.4
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.4e-44 182.6 158 58.2
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 4.5e-44 182.2 151 62.3
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 4.5e-44 182.2 147 64.6
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 5.8e-44 181.8 144 62.5
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 1.7e-43 180.3 149 63.1
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 2.2e-43 179.9 151 61.6
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.1e-42 177.6 248 47.2
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 9.3e-42 174.5 147 57.1
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 4.6e-41 172.2 158 52.5
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.0e-40 171.0 141 63.8
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.8e-40 170.2 191 50.8
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 6.7e-40 168.3 156 58.3
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 8.7e-40 167.9 237 42.6
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.6e-38 163.7 154 54.5
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.6e-38 163.7 233 42.9
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 4.8e-38 162.2 165 50.9
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 6.3e-38 161.8 227 43.2
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 8.2e-38 161.4 164 50.6
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 1.1e-37 161.0 149 56.4
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 3.1e-37 159.5 165 51.5
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 6.9e-37 158.3 131 58.8
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 3.4e-36 156.0 189 47.1
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 1.9e-34 150.2 197 45.7
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 3.2e-34 149.4 226 40.7
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.2e-33 147.5 233 40.8
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 6.7e-32 141.7 233 38.2
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 5.0e-27 125.6 202 39.1
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 5.0e-19 99.0 93 54.8
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 3.2e-18 96.3 182 35.2
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 1.6e-17 94.0 184 34.2
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 2.3e-16 90.1 138 42.0
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 3.1e-13 79.7 184 30.4
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 1.4e-08 64.3 68 47.1


User provided reference genes

Program Settings