Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO421G0588 Papaver somniferum HOM05D003357 ORTHO05D003779 4.0e-84 314.7 157 100.0
MBI13_g01678_MAGBIO Magnolia biondii HOM05D003357 ORTHO05D003779 2.7e-19 99.4 154 41.6
Dinv37830 Davidia involucrata HOM05D003357 ORTHO05D003779 9.5e-17 90.9 115 43.5
Hma1.2p1_0090F.1_g045910 Hydrangea macrophylla HOM05D003357 ORTHO05D003779 3.6e-16 89.0 139 37.4
Migut.I01123 Erythranthe guttata HOM05D003357 ORTHO05D003779 1.8e-15 86.7 157 33.8
SalBow2G0668 Salvia bowleyana HOM05D003357 ORTHO05D003779 2.3e-15 86.3 158 37.3
FvH4_6g35660 Fragaria vesca HOM05D003357 ORTHO05D003779 6.8e-15 84.7 157 31.2
Oeu013442.1 Olea europaea HOM05D000643 ORTHO05D000663 1.5e-14 83.6 155 34.8
CANSAT56G4096 Cannabis sativa HOM05D003357 ORTHO05D003779 7.5e-14 81.3 157 30.6
Sc15g0000760 Simmondsia chinensis HOM05D003357 ORTHO05D003779 7.5e-14 81.3 129 34.9
CiPaw.02G132100 Carya illinoinensis HOM05D003357 ORTHO05D003779 6.3e-13 78.2 158 31.6
Gohir.D05G143300 Gossypium hirsutum HOM05D003357 ORTHO05D003779 6.3e-13 78.2 159 32.7
Gohir.A05G141100 Gossypium hirsutum HOM05D003357 ORTHO05D003779 1.1e-12 77.4 159 32.1
RcHm_v2.0_Chr2g0147641 Rosa chinensis HOM05D003357 ORTHO05D003779 1.1e-12 77.4 128 32.0
Duzib235G0273 Durio zibethinus HOM05D003357 ORTHO05D003779 2.4e-12 76.3 157 31.2
Potri.001G163800 Populus trichocarpa HOM05D003357 ORTHO05D003779 4.1e-12 75.5 153 30.1
QL05p001541 Quercus lobata HOM05D003357 ORTHO05D003779 4.1e-12 75.5 159 32.7
QL05p001815 Quercus lobata HOM05D003357 ORTHO05D003779 4.1e-12 75.5 159 32.7
ATR0317G009 Amborella trichopoda HOM05D003357 ORTHO05D003779 5.4e-12 75.1 153 30.1
Prupe.3G032500 Prunus persica HOM05D003357 ORTHO05D003779 5.4e-12 75.1 132 35.6
Zm00001eb099990 Zea mays HOM05D003357 ORTHO05D003779 5.4e-12 75.1 156 26.9
Nitab4.5_0003987g0080 Nicotiana tabacum HOM05D003357 ORTHO05D003779 1.2e-11 73.9 133 32.3
Gorai.009G147200 Gossypium raimondii HOM05D003357 ORTHO05D003779 2.0e-11 73.2 159 31.4
MD17G1152300 Malus domestica HOM05D003357 ORTHO05D003779 7.8e-11 71.2 133 33.1
Solyc03g123510.3 Solanum lycopersicum HOM05D003357 ORTHO05D003779 7.8e-11 71.2 115 33.0
SGA_v2.0_scaffold71G23911 Striga asiatica HOM05D003357 ORTHO05D003779 1.3e-10 70.5 119 35.3
FAN05G0423 Fragaria x ananassa HOM05D003357 ORTHO05D003779 1.7e-10 70.1 157 28.7
Sabra01G0129000 Salix brachista HOM05D003357 ORTHO05D003779 1.7e-10 70.1 171 26.9
Sopen03g041280 Solanum pennellii HOM05D003357 ORTHO05D003779 1.5e-09 67.0 132 30.3
Ciclev10026388m.g Citrus clementina HOM05D003357 ORTHO05D003779 3.3e-09 65.9 159 30.8
Lsat_1_v5_gn_0_41661 Lactuca sativa HOM05D003357 ORTHO05D003779 1.2e-08 63.9 125 28.8
Peaxi162Scf00038g02213 Petunia axillaris HOM05D003357 ORTHO05D003779 2.1e-08 63.2 105 35.2
CDE06G1413 Ceratophyllum demersum HOM05D003357 ORTHO05D003779 4.7e-08 62.0 118 32.2
CAN.G790.70 Capsicum annuum HOM05D003357 ORTHO05D003779 1.4e-07 60.5 106 34.9
CDE06G2726 Ceratophyllum demersum HOM05D003357 ORTHO05D003779 1.4e-07 60.5 118 31.4
ECA234G2199 Erigeron canadensis HOM05D003357 ORTHO05D003779 1.4e-07 60.5 118 30.5
COL.COLO4_30848 Corchorus olitorius HOM05D003357 ORTHO05D003779 1.8e-07 60.1 108 32.4
TAR197G0001 Trochodendron aralioides HOM05D003357 ORTHO05D003779 3.0e-07 59.3 118 33.1
HanXRQChr16g0514191 Helianthus annuus HOM05D003357 ORTHO05D003779 5.2e-07 58.5 118 29.7
Nitab4.5_0015287g0010 Nicotiana tabacum HOM05D003357 ORTHO05D003779 8.9e-07 57.8 70 41.4
MBI06_g01047_MAGBIO Magnolia biondii HOM05D003357 ORTHO05D003779 2.0e-06 56.6 118 28.8
Manes.04G150000 Manihot esculenta HOM05D003357 ORTHO05D003779 2.0e-06 56.6 112 30.4
PSO017G4220 Papaver somniferum HOM05D003357 ORTHO05D003779 2.0e-06 56.6 118 30.5
MSTRG.16542 Avicennia marina HOM05D003357 ORTHO05D003779 2.6e-06 56.2 118 28.8
Dinv24254 Davidia involucrata HOM05D003357 ORTHO05D003779 2.6e-06 56.2 118 30.5
HanXRQChr10g0300241 Helianthus annuus HOM05D003357 ORTHO05D003779 3.4e-06 55.8 120 28.3
SEGI_11822 Sequoiadendron giganteum HOM05D003357 ORTHO05D003779 3.4e-06 55.8 122 30.3
Lsat_1_v5_gn_7_78341 Lactuca sativa HOM05D003357 ORTHO05D003779 4.4e-06 55.5 118 29.7
Lsat_1_v5_gn_5_107641 Lactuca sativa HOM05D003357 ORTHO05D003779 5.8e-06 55.1 118 28.0
HanXRQChr11g0337561 Helianthus annuus HOM05D003357 ORTHO05D003779 7.5e-06 54.7 116 31.0
MELO3C012699.2 Cucumis melo HOM05D003357 ORTHO05D003779 9.8e-06 54.3 118 29.7
CsaV3_7G022210 Cucumis sativus L. HOM05D003357 ORTHO05D003779 9.8e-06 54.3 118 29.7
Lj9A312T45 Lonicera japonica HOM05D003357 ORTHO05D003779 9.8e-06 54.3 118 29.7


User provided reference genes

Program Settings