Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 3.5e-230 801.2 386 100.0
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 3.8e-208 728.0 387 91.7
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 1.5e-111 407.1 321 66.0
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 8.0e-110 401.4 227 82.8
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 1.4e-109 400.6 356 60.4
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 4.0e-109 399.1 226 81.9
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 8.9e-109 397.9 237 78.1
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 9.8e-108 394.4 261 71.6
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 1.3e-107 394.0 218 84.4
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 2.2e-107 393.3 220 84.5
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 2.2e-107 393.3 225 82.2
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 2.9e-107 392.9 257 73.9
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 3.2e-106 389.4 252 73.0
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 3.2e-106 389.4 215 82.8
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 5.4e-106 388.7 250 74.4
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 7.0e-106 388.3 250 74.0
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.2e-105 387.5 250 74.0
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 4.6e-105 385.6 242 75.2
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.0e-104 384.4 276 68.1
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 1.0e-104 384.4 219 79.9
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 3.0e-104 382.9 316 62.7
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 6.6e-104 381.7 238 77.3
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 8.6e-104 381.3 220 80.9
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 8.6e-104 381.3 279 67.0
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 4.3e-103 379.0 324 60.5
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 5.6e-103 378.6 215 80.9
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 7.3e-103 378.3 213 81.7
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 9.5e-103 377.9 205 84.9
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 9.5e-103 377.9 205 84.9
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 9.5e-103 377.9 205 84.9
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 9.5e-103 377.9 310 64.5
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.1e-102 376.7 205 84.9
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 2.1e-102 376.7 241 72.6
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 2.8e-102 376.3 227 78.0
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 2.8e-102 376.3 321 61.1
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 3.6e-102 375.9 315 62.2
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 3.6e-102 375.9 216 81.0
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 4.7e-102 375.6 241 73.4
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 6.2e-102 375.2 322 61.5
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 8.1e-102 374.8 219 79.9
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 1.1e-101 374.4 349 57.9
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.8e-101 373.6 211 80.6
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 2.3e-101 373.2 210 83.3
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 4.0e-101 372.5 210 82.4
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 5.2e-101 372.1 243 73.3
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 5.2e-101 372.1 203 84.2
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 5.2e-101 372.1 205 83.9
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 5.2e-101 372.1 210 82.9
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 8.9e-101 371.3 210 80.5
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.2e-100 370.9 219 78.1
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 1.2e-100 370.9 229 76.0
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.5e-100 370.5 210 82.4
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.5e-100 370.5 311 61.7
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 2.0e-100 370.2 216 79.2
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 2.0e-100 370.2 311 61.4
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 2.6e-100 369.8 216 79.2
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 2.6e-100 369.8 206 83.0
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 2.6e-100 369.8 200 85.0
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 2.6e-100 369.8 218 79.8
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 2.6e-100 369.8 310 63.2
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 3.4e-100 369.4 227 76.7
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 3.4e-100 369.4 208 82.2
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 3.4e-100 369.4 290 64.8
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 3.4e-100 369.4 229 76.0
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 7.5e-100 368.2 210 82.4
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 1.3e-99 367.5 218 80.3
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 2.9e-99 366.3 256 69.9
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 4.9e-99 365.5 319 59.6
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 4.9e-99 365.5 246 69.1
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 4.9e-99 365.5 216 76.9
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 4.9e-99 365.5 206 81.1
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 6.4e-99 365.2 235 73.6
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 6.4e-99 365.2 229 75.1
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 1.1e-98 364.4 210 81.9
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 1.4e-98 364.0 219 76.7
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 1.4e-98 364.0 219 76.7
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 3.2e-98 362.8 206 79.1
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 3.2e-98 362.8 206 79.1
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 3.2e-98 362.8 222 78.4
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 4.1e-98 362.5 206 79.1
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 4.1e-98 362.5 204 81.9
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 5.4e-98 362.1 249 68.3
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 7.1e-98 361.7 235 74.0
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 9.2e-98 361.3 206 78.6
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.2e-97 360.9 207 79.2
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.2e-97 360.9 207 79.2
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.2e-97 360.9 233 74.2
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.2e-97 360.9 208 79.8
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 1.6e-97 360.5 202 80.7
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 2.1e-97 360.1 206 79.6
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 2.1e-97 360.1 206 78.6
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 2.7e-97 359.8 266 67.7
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 1.7e-96 357.1 207 79.7
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.7e-96 357.1 207 79.7
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 1.7e-96 357.1 206 77.7
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 3.9e-96 355.9 194 82.5
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 5.1e-96 355.5 250 67.6
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 6.6e-96 355.1 249 67.5
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.1e-95 354.4 292 61.6
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 1.1e-95 354.4 284 64.8
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 1.5e-95 354.0 207 77.8
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 2.5e-95 353.2 313 61.0
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 4.3e-95 352.4 314 61.1
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 5.6e-95 352.1 207 77.8
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 2.6e-92 343.2 244 68.4
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 9.9e-92 341.3 238 66.4
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.2e-91 340.1 210 73.3
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.9e-91 339.7 206 75.2
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 4.9e-91 339.0 206 75.2
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 1.1e-90 337.8 316 57.0
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 3.2e-90 336.3 213 72.8
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 7.1e-90 335.1 236 66.5
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.3e-88 330.9 228 67.5
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 2.3e-88 330.1 216 71.3
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.6e-86 323.9 207 70.5
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 4.7e-86 322.4 286 55.9
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 4.9e-83 312.4 340 51.2
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.7e-80 303.9 224 61.2
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 5.8e-76 288.9 163 77.3
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 4.2e-74 282.7 160 78.1
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 3.5e-73 279.6 258 59.7
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 1.0e-72 278.1 200 60.0
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 5.1e-72 275.8 162 75.9
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 5.6e-71 272.3 201 60.7
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 8.1e-70 268.5 280 54.3
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 5.3e-69 265.8 151 79.5
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 7.6e-68 261.9 138 87.0
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 6.0e-65 252.3 144 78.5
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 7.1e-58 228.8 201 54.2
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 9.7e-55 218.4 122 78.7
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 2.3e-48 197.2 152 64.5
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 6.9e-45 185.7 171 51.5
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 1.2e-44 184.9 156 58.3
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.4e-29 134.8 117 51.3
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 2.0e-23 114.4 83 56.6
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.8e-22 110.5 105 53.3
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 2.7e-20 104.0 208 37.5
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 1.1e-18 98.6 213 35.2
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 2.5e-18 97.4 83 59.0
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 9.4e-18 95.5 81 60.5
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.5e-15 88.2 73 60.3
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 3.7e-14 83.6 59 67.8
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 5.9e-12 76.3 78 50.0
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 4.9e-06 56.6 37 67.6


User provided reference genes

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