Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO421G0160 Papaver somniferum HOM05D007091 ORTHO05D008768 4.4e-124 448.0 228 100.0
PSO384G3314 Papaver somniferum HOM05D007091 ORTHO05D008768 6.9e-85 317.8 225 76.9
Nn4g24542 Nelumbo nucifera HOM05D007091 ORTHO05D008768 4.2e-66 255.4 240 61.7
Aqoxy3G04057 Aquilegia oxysepala HOM05D007091 ORTHO05D008768 5.1e-64 248.4 241 60.6
Dinv01447 Davidia involucrata HOM05D007091 ORTHO05D008768 2.6e-63 246.1 245 58.8
TAR629G3120 Trochodendron aralioides HOM05D007091 ORTHO05D008768 7.4e-63 244.6 240 57.9
vmacro18668 Vaccinium macrocarpon HOM05D007091 ORTHO05D008768 2.8e-62 242.7 238 58.8
Dinv32110 Davidia involucrata HOM05D007091 ORTHO05D008768 3.7e-62 242.3 238 59.2
Manes.14G173700 Manihot esculenta HOM05D007091 ORTHO05D008768 1.4e-61 240.4 227 59.9
Atru.chr9.1636 Acer truncatum HOM05D007091 ORTHO05D008768 2.4e-61 239.6 229 62.0
CSS0046666 Camellia sinensis var. sinensis HOM05D007091 ORTHO05D008768 7.0e-61 238.0 237 59.5
Cc04_g09250 Coffea canephora HOM05D007091 ORTHO05D008768 1.5e-60 236.9 232 57.3
Duzib264G1108 Durio zibethinus HOM05D007091 ORTHO05D008768 2.6e-60 236.1 224 59.8
Potri.012G041400 Populus trichocarpa HOM05D007091 ORTHO05D008768 4.5e-60 235.3 226 61.1
Cfa020656 Carpinus fangiana HOM05D007091 ORTHO05D008768 5.9e-60 235.0 239 56.9
Gohir.D11G227400 Gossypium hirsutum HOM05D007091 ORTHO05D008768 1.3e-59 233.8 226 58.4
QL09p036643 Quercus lobata HOM05D007091 ORTHO05D008768 2.2e-59 233.0 236 57.2
Hma1.2p1_0844F.1_g227450 Hydrangea macrophylla HOM05D007091 ORTHO05D008768 3.8e-59 232.3 246 57.3
Gorai.007G246600 Gossypium raimondii HOM05D007091 ORTHO05D008768 5.0e-59 231.9 226 57.5
Actinidia34668 Actinidia chinensis HOM05D007091 ORTHO05D008768 6.5e-59 231.5 241 56.0
Sopen06g028870 Solanum pennellii HOM05D007091 ORTHO05D008768 8.5e-59 231.1 236 56.8
Lj2g0019861 Lotus japonicus HOM05D007091 ORTHO05D008768 1.1e-58 230.7 242 57.0
arahy.Tifrunner.gnm1.ann1.0PBM2M Arachis hypogaea HOM05D007091 ORTHO05D008768 1.5e-58 230.3 239 55.6
Gohir.A11G233700 Gossypium hirsutum HOM05D007091 ORTHO05D008768 1.5e-58 230.3 226 58.4
Sabra12G0028500 Salix brachista HOM05D007091 ORTHO05D008768 2.5e-58 229.6 223 59.6
Solyc06g072500.2 Solanum lycopersicum HOM05D007091 ORTHO05D008768 2.5e-58 229.6 236 55.9
GSVIVG01000383001 Vitis vinifera HOM05D007091 ORTHO05D008768 5.5e-58 228.4 241 56.0
Ciclev10026363m.g Citrus clementina HOM05D007091 ORTHO05D008768 7.2e-58 228.0 234 58.5
CDE07G0316 Ceratophyllum demersum HOM05D007091 ORTHO05D008768 1.6e-57 226.9 237 56.1
COL.COLO4_24457 Corchorus olitorius HOM05D007091 ORTHO05D008768 1.6e-57 226.9 230 55.7
Ca_20293_v3 Cicer arietinum L. HOM05D007091 ORTHO05D008768 2.7e-57 226.1 232 58.6
Eucgr.H00567 Eucalyptus grandis HOM05D007091 ORTHO05D008768 8.0e-57 224.6 241 54.4
CAN.G65.99 Capsicum annuum HOM05D007091 ORTHO05D008768 1.0e-56 224.2 236 55.9
Lalb_Chr22g0353631 Lupinus albus HOM05D007091 ORTHO05D008768 1.0e-56 224.2 238 56.3
arahy.Tifrunner.gnm1.ann1.M1K315 Arachis hypogaea HOM05D007091 ORTHO05D008768 1.4e-56 223.8 237 54.0
FvH4_5g17800 Fragaria vesca HOM05D007091 ORTHO05D008768 2.3e-56 223.0 238 55.5
Nitab4.5_0000033g0140 Nicotiana tabacum HOM05D007091 ORTHO05D008768 3.0e-56 222.6 238 55.5
Glyma.09G170700 Glycine max HOM05D007091 ORTHO05D008768 3.9e-56 222.2 234 57.7
Nitab4.5_0005533g0060 Nicotiana tabacum HOM05D007091 ORTHO05D008768 3.9e-56 222.2 238 55.5
FAN13G0023 Fragaria x ananassa HOM05D007091 ORTHO05D008768 5.2e-56 221.9 239 54.8
SEGI_35239 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 8.8e-56 221.1 240 55.0
Lsat_1_v5_gn_2_11841 Lactuca sativa HOM05D007091 ORTHO05D008768 1.1e-55 220.7 228 55.3
Thecc.03G065800 Theobroma cacao HOM05D007091 ORTHO05D008768 1.5e-55 220.3 227 57.3
Os05g0387800 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 5.7e-55 218.4 241 53.9
TWI15G0826 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 7.4e-55 218.0 238 55.9
CiPaw.15G149800 Carya illinoinensis HOM05D007091 ORTHO05D008768 9.7e-55 217.6 235 54.9
RcHm_v2.0_Chr7g0177781 Rosa chinensis HOM05D007091 ORTHO05D008768 9.7e-55 217.6 238 55.0
MD06G1234100 Malus domestica HOM05D007091 ORTHO05D008768 1.3e-54 217.2 236 52.1
VMungo0464G0064 Vigna mungo HOM05D007091 ORTHO05D008768 2.2e-54 216.5 239 55.2
SEGI_03292 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 3.7e-54 215.7 232 55.6
TPR.G31708 Trifolium pratense HOM05D007091 ORTHO05D008768 4.8e-54 215.3 236 55.1
Peaxi162Scf01064g00022 Petunia axillaris HOM05D007091 ORTHO05D008768 8.2e-54 214.5 238 54.2
Prupe.5G238600 Prunus persica HOM05D007091 ORTHO05D008768 3.1e-53 212.6 238 53.4
Migut.I00575 Erythranthe guttata HOM05D007091 ORTHO05D008768 7.0e-53 211.5 225 56.0
C08p18530 Brassica napus HOM05D007091 ORTHO05D008768 9.1e-53 211.1 228 54.4
DCAR_004559 Daucus carota HOM05D007091 ORTHO05D009263 1.2e-52 210.7 257 51.0
BcaC07g38895 Brassica carinata HOM05D007091 ORTHO05D008768 1.6e-52 210.3 228 54.4
BolC8t49485H Brassica oleracea HOM05D007091 ORTHO05D008768 1.6e-52 210.3 228 53.9
Sc10g0009000 Simmondsia chinensis HOM05D007091 ORTHO05D008768 1.6e-52 210.3 233 54.5
A08p30440 Brassica napus HOM05D007091 ORTHO05D008768 2.0e-52 209.9 228 53.9
Haze_18937 Corylus avellana HOM05D007091 ORTHO05D008768 3.5e-52 209.1 205 58.0
Atru.chr9.1624 Acer truncatum HOM05D007091 ORTHO05D008768 7.7e-52 208.0 194 62.9
HanXRQChr06g0179681 Helianthus annuus HOM05D007091 ORTHO05D008768 1.0e-51 207.6 228 52.2
Zm00001eb256360 Zea mays HOM05D007091 ORTHO05D008768 1.3e-51 207.2 217 55.8
BraA08t34976Z Brassica rapa HOM05D007091 ORTHO05D008768 2.2e-51 206.5 230 53.0
Aa31LG7G2780 Aethionema arabicum HOM05D007091 ORTHO05D008768 3.8e-51 205.7 227 53.3
FAN04G2000 Fragaria x ananassa HOM05D007091 ORTHO05D008768 1.5e-50 203.8 218 55.5
MD14G1240800 Malus domestica HOM05D007091 ORTHO05D008768 5.5e-50 201.8 226 54.4
ATR0598G099 Amborella trichopoda HOM05D007091 ORTHO05D008768 7.2e-50 201.4 201 57.2
AT1G18335 Arabidopsis thaliana HOM05D007091 ORTHO05D008768 7.2e-50 201.4 233 52.4
BcaB03g12975 Brassica carinata HOM05D007091 ORTHO05D008768 1.2e-49 200.7 234 51.7
Medtr6g072100 Medicago truncatula HOM05D007091 ORTHO05D008768 1.2e-49 200.7 236 52.5
HPP92_007322 Vanilla planifolia HOM05D007091 ORTHO05D008768 1.6e-49 200.3 235 52.3
AL1G30710 Arabidopsis lyrata HOM05D007091 ORTHO05D008768 2.1e-49 199.9 229 52.4
Thhalv10008624m.g Eutrema salsugineum HOM05D007091 ORTHO05D008768 4.7e-49 198.7 234 51.3
Sp1g16300 Schrenkiella parvula HOM05D007091 ORTHO05D008768 1.0e-48 197.6 229 52.4
SMO347G0535 Selaginella moellendorffii HOM05D007091 ORTHO05D008768 1.0e-48 197.6 224 52.2
Carub.0001s1796 Capsella rubella HOM05D007091 ORTHO05D008768 1.4e-48 197.2 233 51.9
CARHR018920 Cardamine hirsuta HOM05D007091 ORTHO05D008768 1.4e-48 197.2 229 52.8
CANSAT35G2054 Cannabis sativa HOM05D007091 ORTHO05D008768 1.8e-48 196.8 240 50.0
Mapoly0049s0094 Marchantia polymorpha HOM05D007091 ORTHO05D008768 4.0e-48 195.7 243 49.0
SGA_v2.0_scaffold40G15610 Striga asiatica HOM05D007091 ORTHO05D008768 4.0e-48 195.7 195 55.9
MELO3C001924.2 Cucumis melo HOM05D007091 ORTHO05D008768 6.8e-48 194.9 239 49.4
ClCG04G012810 Citrullus lanatus HOM05D007091 ORTHO05D008768 8.8e-48 194.5 236 50.0
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 3.4e-47 192.6 224 52.2
Os02g0772300 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 2.2e-46 189.9 198 54.5
Oeu058744.1 Olea europaea HOM05D007091 ORTHO05D008768 2.8e-46 189.5 177 61.6
Pp3c17_14350 Physcomitrium patens HOM05D007091 ORTHO05D008768 1.8e-45 186.8 198 51.5
Psat1g124480 Pisum sativum HOM05D007091 ORTHO05D008768 1.8e-45 186.8 205 56.6
EL10Ac1g00193 Beta vulgaris HOM05D007091 ORTHO05D008768 2.4e-45 186.4 188 57.4
CsaV3_1G004900 Cucumis sativus L. HOM05D007091 ORTHO05D008768 1.7e-43 180.3 216 49.5
Pp3c9_11360 Physcomitrium patens HOM05D000137 ORTHO05D000382 3.2e-42 176.0 207 49.3
Hund27153 Selenicereus undatus HOM05D007091 ORTHO05D008768 5.5e-42 175.3 230 48.3
MSTRG.11241 Avicennia marina HOM05D007091 ORTHO05D008768 4.0e-40 169.1 164 57.3
AagrBONN_evm.TU.Sc2ySwM_228.1246 Anthoceros agrestis HOM05D007091 ORTHO05D008768 2.0e-39 166.8 204 46.6
Phvul.004G146400 Phaseolus vulgaris HOM05D007091 ORTHO05D008768 2.0e-39 166.8 170 58.2
AUR62022670 Chenopodium quinoa HOM05D007091 ORTHO05D008768 5.7e-39 165.2 168 56.5
AUR62004555 Chenopodium quinoa HOM05D007091 ORTHO05D008768 1.1e-37 161.0 168 55.4
Pp3c15_11610 Physcomitrium patens HOM05D000137 ORTHO05D008768 1.4e-37 160.6 190 44.7
SHI19106 Sapria himalayana HOM05D007091 ORTHO05D008768 3.3e-34 149.4 162 53.1
ECA238G0701 Erigeron canadensis HOM05D007091 ORTHO05D008768 2.8e-33 146.4 160 53.8
PGSC0003DMG401027044 Solanum tuberosum HOM05D007091 ORTHO05D008768 5.7e-31 138.7 139 56.8
Sed0004344 Sechium edule HOM05D007091 ORTHO05D008768 2.2e-30 136.7 176 47.2
Lj9P415T25 Lonicera japonica HOM05D007091 ORTHO05D008768 3.5e-28 129.4 135 54.8
MCO05G578 Micromonas commoda HOM05D007091 ORTHO05D008768 1.2e-23 114.4 232 37.9
PSO832G1393 Papaver somniferum HOM05D007091 ORTHO05D008768 9.8e-23 111.3 87 70.1
BcaC03g18194 Brassica carinata HOM05D007091 ORTHO05D008768 6.4e-22 108.6 118 50.8
unitig_21.g20331 Utricularia gibba HOM05D007091 ORTHO05D008768 1.2e-20 104.4 101 56.4
CBR_g40646 Chara braunii HOM05D007091 ORTHO05D008768 5.0e-19 99.0 127 44.1
TWI81G1026 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 7.3e-18 95.1 124 52.4
C02p62570 Brassica napus HOM05D001735 ORTHO05D001640 3.6e-17 92.8 75 62.7
MCO07G264 Micromonas commoda HOM05D007091 ORTHO05D008768 4.4e-15 85.9 143 39.9
BolC2t12316H Brassica oleracea HOM05D007091 ORTHO05D008768 6.4e-14 82.0 88 51.1
PRCOL_00001323 Prasinoderma coloniale HOM05D007091 ORTHO05D008768 6.6e-11 72.0 168 32.1
Cre10.g431450 Chlamydomonas reinhardtii HOM05D007091 ORTHO05D008768 1.5e-10 70.9 192 31.2


User provided reference genes

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