Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 6.8e-262 906.7 447 100.0
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.7e-252 875.5 447 96.4
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.1e-214 748.4 450 83.1
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 2.5e-208 728.8 456 80.5
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 3.3e-208 728.4 451 80.0
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 4.3e-208 728.0 455 80.0
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.2e-207 725.7 454 78.9
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 5.3e-206 721.1 456 78.9
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 1.2e-205 719.9 455 79.3
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 3.4e-205 718.4 461 78.5
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.4e-205 718.4 454 79.5
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.0e-204 716.8 456 78.5
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 2.2e-204 715.7 454 78.0
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 3.8e-204 714.9 456 78.5
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 3.8e-204 714.9 456 78.9
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 6.5e-204 714.1 452 79.6
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 8.5e-204 713.8 453 78.6
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.9e-203 712.6 454 78.9
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 2.5e-203 712.2 452 78.5
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 3.2e-203 711.8 449 80.0
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 3.2e-203 711.8 455 78.9
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 7.2e-203 710.7 457 77.2
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 1.6e-202 709.5 452 78.1
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 3.6e-202 708.4 473 76.3
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 4.7e-202 708.0 453 77.7
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.0e-201 706.8 457 78.1
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.0e-201 706.8 454 78.2
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 1.4e-201 706.4 448 78.6
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.4e-201 706.4 456 77.4
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.4e-201 706.4 456 78.1
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 1.8e-201 706.1 461 76.1
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.3e-201 705.7 473 75.9
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.9e-201 704.9 457 77.7
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 5.1e-201 704.5 457 77.5
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.1e-200 703.4 453 77.7
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.1e-200 703.4 455 76.9
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 2.0e-200 702.6 452 77.7
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.6e-200 702.2 454 78.0
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 2.6e-200 702.2 461 75.7
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 3.3e-200 701.8 453 78.1
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.3e-199 699.9 453 77.0
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 3.7e-199 698.4 453 77.3
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 3.7e-199 698.4 452 76.8
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 8.2e-199 697.2 453 77.3
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.8e-198 696.0 452 77.4
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 3.1e-198 695.3 460 75.4
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 5.3e-198 694.5 458 76.2
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 2.6e-197 692.2 452 75.9
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 2.6e-197 692.2 449 77.3
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 3.4e-197 691.8 457 76.6
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 7.7e-197 690.6 452 76.3
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.0e-196 690.3 452 75.0
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 1.3e-196 689.9 473 74.0
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 2.9e-196 688.7 462 75.8
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 2.9e-196 688.7 470 74.0
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 2.9e-196 688.7 454 76.2
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 5.0e-196 688.0 452 74.8
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 6.5e-196 687.6 448 75.7
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 3.2e-195 685.3 462 75.5
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 7.2e-195 684.1 451 74.3
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 1.2e-194 683.3 452 74.8
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 6.1e-194 681.0 459 74.5
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 6.1e-194 681.0 457 74.4
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 6.1e-194 681.0 519 69.2
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 3.0e-193 678.7 442 76.2
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.0e-193 678.7 461 75.3
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.1e-192 676.8 447 75.8
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 1.5e-192 676.4 456 75.0
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 2.0e-192 676.0 447 75.6
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 2.2e-191 672.5 382 84.3
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.7e-191 671.8 382 84.0
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 4.8e-191 671.4 451 74.7
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.4e-190 669.8 451 74.7
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.6e-189 665.6 386 83.7
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 4.5e-189 664.8 457 74.2
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.0e-188 663.7 461 74.6
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 8.5e-188 660.6 458 73.6
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 8.5e-188 660.6 391 81.6
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 7.2e-187 657.5 461 72.9
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 6.1e-186 654.4 362 87.3
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 3.0e-185 652.1 455 71.4
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 2.0e-181 639.4 460 71.3
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.7e-181 639.0 356 87.1
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 5.0e-180 634.8 456 71.7
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 5.0e-180 634.8 391 79.0
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.0e-177 625.5 453 72.4
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 4.0e-177 625.2 461 69.8
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.0e-176 622.9 447 71.4
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 2.2e-175 619.4 364 82.4
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 4.2e-171 605.1 396 73.0
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.4e-166 590.1 332 85.2
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 5.6e-163 578.2 332 84.0
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.9e-159 565.8 400 68.5
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 3.7e-159 565.5 401 67.6
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.0e-156 557.4 400 68.2
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.8e-154 549.3 358 77.9
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 8.0e-154 547.7 353 76.5
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 1.3e-151 540.4 387 66.1
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 2.1e-149 533.1 385 71.9
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 4.6e-149 531.9 457 62.6
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 6.4e-143 511.5 302 81.1
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 4.4e-136 488.8 279 84.2
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 9.9e-136 487.6 320 73.1
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 7.1e-134 481.5 411 58.6
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.2e-125 454.1 310 73.9
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 7.8e-125 451.4 405 61.5
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 9.6e-123 444.5 320 70.0
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.8e-121 440.3 236 86.9
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.8e-121 440.3 236 86.9
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.2e-120 437.6 418 58.4
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 2.6e-120 436.4 332 67.8
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 9.9e-112 407.9 412 50.0
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 2.5e-86 323.6 242 69.0
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 3.3e-75 286.6 318 46.2
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 5.2e-60 236.1 340 40.3
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 7.7e-56 222.2 403 36.0
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.3e-52 210.7 401 35.7
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.0e-48 197.6 344 33.7
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 7.8e-48 195.7 117 82.1
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 8.9e-44 182.2 348 33.3
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.1e-41 175.3 102 79.4
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 7.0e-41 172.6 362 30.9
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 1.7e-39 167.9 148 59.5
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.3e-39 167.5 100 81.0
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 8.1e-37 159.1 151 56.3
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 2.0e-35 154.5 96 80.2
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 4.0e-20 103.6 51 86.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 1.5e-14 85.1 45 95.6
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 9.9e-11 72.4 89 48.3
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 2.7e-08 64.3 150 28.0
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 1.3e-07 62.0 41 73.2
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.7e-07 61.6 42 73.8


User provided reference genes

Program Settings