Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 1.7e-79 299.3 148 100.0
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 3.6e-66 255.0 139 88.5
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 5.7e-64 247.7 139 87.1
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 3.7e-63 245.0 133 89.5
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 8.3e-39 164.1 142 62.0
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 3.5e-37 158.7 142 58.5
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.8e-36 155.2 141 56.0
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 5.0e-36 154.8 149 54.4
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 3.3e-35 152.1 132 61.4
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 4.3e-35 151.8 132 57.6
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 1.2e-34 150.2 141 52.5
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 6.1e-34 147.9 139 55.4
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 6.1e-34 147.9 138 56.5
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 1.0e-33 147.1 139 55.4
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.4e-33 146.7 140 56.4
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 4.0e-33 145.2 138 55.8
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 4.0e-33 145.2 149 51.7
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 5.2e-33 144.8 141 53.9
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 6.8e-33 144.4 141 53.9
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.2e-32 143.7 129 55.8
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 1.5e-32 143.3 121 59.5
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 2.0e-32 142.9 153 51.6
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 4.4e-32 141.7 140 52.9
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 7.5e-32 141.0 150 49.3
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 9.8e-32 140.6 129 55.0
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 2.9e-31 139.0 139 51.8
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 2.9e-31 139.0 133 54.9
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 6.4e-31 137.9 142 54.9
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 1.1e-30 137.1 148 50.7
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.4e-30 136.7 142 53.5
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 1.4e-30 136.7 141 51.1
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 1.9e-30 136.3 139 51.1
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 1.9e-30 136.3 132 53.0
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 1.9e-30 136.3 132 53.0
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 4.1e-30 135.2 138 52.2
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 4.1e-30 135.2 138 50.7
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 5.4e-30 134.8 138 52.2
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 5.4e-30 134.8 138 53.6
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 7.0e-30 134.4 122 53.3
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 7.0e-30 134.4 141 49.6
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 9.2e-30 134.0 138 50.7
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 9.2e-30 134.0 134 50.7
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 9.2e-30 134.0 138 52.2
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 1.6e-29 133.3 125 55.2
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 1.6e-29 133.3 147 50.3
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.6e-29 133.3 140 52.1
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 2.0e-29 132.9 133 53.4
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 2.0e-29 132.9 140 52.9
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 3.5e-29 132.1 139 54.0
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 3.5e-29 132.1 135 52.6
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 7.8e-29 131.0 127 52.8
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.3e-28 130.2 133 52.6
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.3e-28 129.4 107 56.1
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 3.9e-28 128.6 142 49.3
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 6.6e-28 127.9 139 48.9
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 1.9e-27 126.3 140 52.1
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.9e-27 126.3 90 68.9
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 2.5e-27 125.9 90 64.4
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 4.3e-27 125.2 144 47.2
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 4.3e-27 125.2 145 49.7
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 4.3e-27 125.2 132 49.2
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.3e-27 125.2 87 70.1
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.3e-27 125.2 87 70.1
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.6e-27 124.8 134 53.0
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 5.6e-27 124.8 129 52.7
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 7.3e-27 124.4 148 46.6
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 7.3e-27 124.4 148 46.6
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 7.3e-27 124.4 134 49.3
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 9.5e-27 124.0 134 52.2
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 1.6e-26 123.2 133 50.4
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.8e-26 122.5 119 58.0
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 3.6e-26 122.1 139 48.2
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 6.2e-26 121.3 87 63.2
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 6.2e-26 121.3 144 49.3
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.8e-25 119.8 134 51.5
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 1.8e-25 119.8 143 46.2
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 1.8e-25 119.8 146 45.9
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 1.8e-25 119.8 102 54.9
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.1e-25 119.0 134 50.7
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.0e-25 118.6 87 67.8
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 5.2e-25 118.2 86 61.6
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 6.8e-25 117.9 86 61.6
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 6.8e-25 117.9 141 49.6
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 1.5e-24 116.7 87 60.9
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.5e-24 116.7 102 56.9
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 2.0e-24 116.3 90 60.0
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 2.0e-24 116.3 155 45.8
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 2.6e-24 115.9 86 60.5
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 2.6e-24 115.9 87 60.9
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 3.4e-24 115.5 112 53.6
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 4.4e-24 115.2 147 44.9
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 4.4e-24 115.2 128 46.9
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 5.8e-24 114.8 115 52.2
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 7.5e-24 114.4 139 47.5
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.7e-23 113.2 138 47.8
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 4.9e-23 111.7 139 44.6
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 6.4e-23 111.3 135 47.4
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 6.4e-23 111.3 147 42.9
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 1.1e-22 110.5 131 45.0
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 1.4e-22 110.2 121 46.3
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 2.4e-22 109.4 128 48.4
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 5.4e-22 108.2 139 43.9
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 5.4e-22 108.2 142 45.1
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 7.0e-22 107.8 138 47.1
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 9.2e-22 107.5 142 45.1
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 9.2e-22 107.5 133 45.1
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 9.2e-22 107.5 81 63.0
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 9.2e-22 107.5 139 46.8
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 1.2e-21 107.1 141 46.1
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 1.6e-21 106.7 104 53.8
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.7e-21 105.9 138 43.5
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 2.7e-21 105.9 141 45.4
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 4.6e-21 105.1 84 58.3
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 7.8e-21 104.4 90 55.6
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 2.3e-20 102.8 84 57.1
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 2.3e-20 102.8 84 57.1
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 2.3e-20 102.8 84 57.1
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 3.0e-20 102.4 84 56.0
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 3.0e-20 102.4 84 56.0
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 5.1e-20 101.7 139 43.9
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 5.1e-20 101.7 138 42.8
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.1e-19 100.5 103 50.5
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 1.5e-19 100.1 139 42.4
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.5e-19 100.1 139 44.6
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 4.3e-19 98.6 139 41.7
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 5.6e-19 98.2 142 43.0
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 5.6e-19 98.2 142 43.0
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 7.3e-19 97.8 137 43.8
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 9.5e-19 97.4 146 40.4
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 2.1e-18 96.3 87 56.3
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 2.8e-18 95.9 155 39.4
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 3.6e-18 95.5 139 42.4
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 4.7e-18 95.1 139 43.2
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 4.7e-18 95.1 139 43.2
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 8.1e-18 94.4 140 39.3
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 1.1e-17 94.0 87 56.3
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 4.0e-17 92.0 134 41.8
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 5.2e-17 91.7 139 42.4
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 5.2e-17 91.7 139 42.4
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 1.5e-16 90.1 138 41.3
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 2.6e-16 89.4 87 52.9
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 4.4e-16 88.6 139 41.0
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 5.8e-16 88.2 139 40.3
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 5.8e-16 88.2 139 40.3
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 7.5e-16 87.8 142 39.4
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 7.5e-16 87.8 142 39.4
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 7.5e-16 87.8 139 39.6
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 2.2e-15 86.3 87 49.4
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 1.1e-14 84.0 87 50.6
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 7.8e-13 77.8 74 52.7
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 5.1e-12 75.1 129 38.8
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 9.5e-11 70.9 73 46.6
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 1.6e-10 70.1 134 37.3
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 6.2e-10 68.2 106 41.5
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 8.1e-10 67.8 59 57.6
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 4.0e-09 65.5 133 37.6
PSO782G3492 Papaver somniferum HOM05D004407 ORTHO05D005074 1.5e-08 63.5 139 37.4
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 9.9e-08 60.8 133 34.6
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.7e-07 60.1 84 41.7
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 2.9e-07 59.3 92 34.8
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 3.8e-07 58.9 142 35.2
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.9e-06 56.6 86 37.2
Medtr4g061650 Medicago truncatula HOM05D004407 ORTHO05D005074 5.4e-06 55.1 53 50.9


User provided reference genes

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