Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.1e-80 303.5 188 100.0
PSO170G2244 Papaver somniferum HOM05D007152 ORTHO05D008912 2.9e-44 182.6 148 89.2
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 9.6e-24 114.4 195 48.7
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 3.6e-23 112.5 193 47.2
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.4e-22 110.5 205 45.9
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 4.0e-22 109.0 204 44.1
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 4.9e-20 102.1 195 47.2
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 4.9e-20 102.1 213 45.5
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 1.9e-19 100.1 210 49.0
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 4.2e-19 99.0 187 42.2
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 4.2e-19 99.0 211 44.1
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 9.3e-19 97.8 146 54.8
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.6e-18 97.1 215 40.9
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.6e-18 97.1 209 37.8
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 2.1e-18 96.7 155 48.4
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 2.1e-18 96.7 215 39.5
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 6.0e-18 95.1 217 40.1
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 6.0e-18 95.1 195 38.5
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 7.8e-18 94.7 130 57.7
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 7.8e-18 94.7 210 41.9
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 5.1e-17 92.0 215 42.8
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 6.6e-17 91.7 219 37.0
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 1.1e-16 90.9 198 39.9
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 1.5e-16 90.5 185 43.8
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 4.3e-16 89.0 209 44.5
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 7.3e-16 88.2 209 49.3
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 9.6e-16 87.8 195 46.7
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 2.8e-15 86.3 141 46.8
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 4.8e-15 85.5 152 44.1
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 4.8e-15 85.5 218 37.6
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 6.2e-15 85.1 209 45.5
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 6.2e-15 85.1 209 45.5
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 6.2e-15 85.1 194 41.8
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 6.2e-15 85.1 146 40.4
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.8e-14 83.6 197 40.1
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.8e-14 83.6 197 44.2
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 3.1e-14 82.8 146 58.9
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 4.0e-14 82.4 146 58.9
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 4.0e-14 82.4 200 39.0
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 1.2e-13 80.9 152 42.1
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 1.5e-13 80.5 206 34.0
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 2.0e-13 80.1 154 51.9
CDE09G0901 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 2.6e-13 79.7 152 55.3
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 3.4e-13 79.3 184 42.4
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 3.4e-13 79.3 171 40.4
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 3.4e-13 79.3 156 44.9
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 4.5e-13 79.0 166 42.8
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 5.8e-13 78.6 188 39.4
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 7.6e-13 78.2 209 31.6
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 7.6e-13 78.2 209 47.4
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 1.7e-12 77.0 146 44.5
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 2.9e-12 76.3 197 38.6
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 3.8e-12 75.9 198 38.4
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 4.9e-12 75.5 150 46.0
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 8.4e-12 74.7 146 45.9
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 1.4e-11 73.9 175 41.1
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 4.2e-11 72.4 187 43.3
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 5.4e-11 72.0 184 43.5
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 9.3e-11 71.2 178 41.0
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 1.2e-10 70.9 189 44.4
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 1.2e-10 70.9 184 45.7
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 1.2e-10 70.9 192 34.9
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.7e-10 69.7 192 35.4
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 6.0e-10 68.6 197 37.1
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 2.3e-09 66.6 188 36.7
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 3.9e-09 65.9 137 41.6
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 3.9e-09 65.9 150 38.7
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 5.1e-09 65.5 196 37.8
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 1.1e-08 64.3 184 34.8
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 2.5e-08 63.2 150 46.0
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.5e-08 63.2 49 63.3
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 4.3e-08 62.4 49 63.3
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 4.3e-08 62.4 212 34.9
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 1.3e-07 60.8 179 39.1
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 1.6e-07 60.5 209 38.3
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 1.6e-07 60.5 125 42.4
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.1e-07 60.1 130 44.6
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 2.8e-07 59.7 210 32.9
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 4.8e-07 58.9 176 38.1
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 8.1e-07 58.2 180 35.0
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 1.1e-06 57.8 54 57.4
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 1.8e-06 57.0 40 62.5
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 1.8e-06 57.0 55 50.9
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 2.4e-06 56.6 184 38.0
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 3.1e-06 56.2 213 33.3


User provided reference genes

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