Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.9e-159 565.8 290 100.0
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 1.1e-151 540.0 290 97.2
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 1.2e-118 430.3 298 76.2
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 3.3e-116 422.2 297 74.7
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 9.6e-116 420.6 299 72.6
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 2.8e-115 419.1 299 73.9
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.1e-114 417.2 298 73.8
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 4.0e-114 415.2 299 73.2
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 1.2e-113 413.7 303 71.3
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 2.0e-113 412.9 299 72.9
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 4.5e-113 411.8 305 72.1
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.0e-112 410.6 298 71.8
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 1.7e-112 409.8 298 72.1
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 2.2e-112 409.5 298 72.8
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 3.8e-112 408.7 300 73.3
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 4.2e-111 405.2 296 72.0
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 7.1e-111 404.4 295 71.5
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 9.3e-111 404.1 291 71.8
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 1.2e-110 403.7 292 72.6
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 1.6e-110 403.3 292 72.3
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 2.7e-110 402.5 298 71.1
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 3.5e-110 402.1 291 71.8
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 4.6e-110 401.7 299 73.9
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 4.6e-110 401.7 298 72.1
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 4.6e-110 401.7 291 71.8
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 4.6e-110 401.7 298 71.8
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.0e-109 400.6 296 72.0
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 1.3e-109 400.2 298 71.5
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 1.3e-109 400.2 297 71.0
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 1.8e-109 399.8 299 68.6
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 1.8e-109 399.8 295 71.5
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.8e-109 399.8 296 71.6
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 2.3e-109 399.4 299 71.2
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 2.3e-109 399.4 291 71.8
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 2.3e-109 399.4 297 70.7
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 3.9e-109 398.7 297 70.7
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 5.1e-109 398.3 294 71.4
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.1e-109 398.3 294 73.1
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 5.1e-109 398.3 298 71.1
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 8.7e-109 397.5 297 69.7
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 1.5e-108 396.7 301 71.8
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 1.5e-108 396.7 300 71.7
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 1.9e-108 396.4 296 70.6
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 2.5e-108 396.0 299 70.2
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.5e-108 396.0 293 72.0
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 2.5e-108 396.0 291 71.1
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 3.3e-108 395.6 294 70.7
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 3.3e-108 395.6 296 72.3
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 5.7e-108 394.8 297 69.4
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 9.6e-108 394.0 298 71.8
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 1.3e-107 393.7 292 72.3
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.3e-107 393.7 293 72.0
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 1.3e-107 393.7 297 69.4
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 1.6e-107 393.3 294 70.1
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 2.8e-107 392.5 292 70.9
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 2.8e-107 392.5 293 71.7
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.8e-107 392.5 293 71.7
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 3.7e-107 392.1 299 68.2
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 4.8e-107 391.7 294 72.1
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.2e-107 391.0 293 71.3
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.4e-106 390.2 293 71.3
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 2.4e-106 389.4 313 67.1
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 2.4e-106 389.4 298 69.5
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 3.1e-106 389.0 296 68.6
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 3.1e-106 389.0 299 67.9
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 3.1e-106 389.0 298 69.5
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 4.1e-106 388.7 299 68.6
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 6.9e-106 387.9 297 69.0
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 9.0e-106 387.5 292 71.9
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 1.2e-105 387.1 302 68.5
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 2.0e-105 386.3 295 68.5
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 4.5e-105 385.2 294 71.1
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 1.0e-104 384.0 292 69.5
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 1.0e-104 384.0 292 70.5
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 8.5e-104 380.9 297 68.4
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 1.9e-103 379.8 297 68.4
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 2.5e-103 379.4 291 69.8
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 5.5e-103 378.3 294 69.4
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 5.5e-103 378.3 292 69.5
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 9.3e-103 377.5 291 68.7
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.2e-102 377.1 292 67.8
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 1.6e-102 376.7 262 72.5
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 3.6e-102 375.6 227 81.1
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 1.8e-101 373.2 292 67.8
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 2.3e-101 372.9 292 67.8
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 2.3e-101 372.9 292 67.1
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 6.7e-101 371.3 290 66.6
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 8.7e-101 370.9 291 68.0
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 3.3e-100 369.0 298 66.4
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 3.3e-100 369.0 298 66.4
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 4.3e-100 368.6 290 66.9
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 4.3e-100 368.6 287 66.6
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 5.7e-100 368.2 291 67.7
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 5.7e-100 368.2 291 67.7
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 5.7e-100 368.2 291 67.7
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 7.4e-100 367.9 290 67.6
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 2.2e-99 366.3 238 76.9
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 2.2e-99 366.3 293 67.6
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 2.8e-99 365.9 291 67.0
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 3.7e-99 365.5 280 68.9
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 3.4e-97 359.0 278 69.4
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 2.2e-96 356.3 299 62.2
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 2.5e-95 352.8 295 65.8
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 3.6e-94 349.0 233 75.1
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.9e-90 334.7 225 73.8
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 2.9e-88 329.3 254 66.5
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 2.9e-88 329.3 266 64.7
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 2.5e-87 326.2 283 63.6
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 3.9e-85 318.9 227 69.6
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 3.3e-84 315.8 219 73.1
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 7.4e-84 314.7 223 70.4
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 8.8e-77 291.2 239 61.1
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.1e-74 284.3 203 68.0
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 1.3e-72 277.3 243 61.3
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 3.8e-64 249.2 212 63.2
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 7.0e-58 228.4 137 79.6
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 7.3e-55 218.4 147 74.1
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 1.2e-49 201.1 222 46.8
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 2.1e-46 190.3 206 48.1
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 1.9e-39 167.2 219 42.9
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 9.8e-36 154.8 89 86.5
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 3.2e-34 149.8 83 89.2
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 4.6e-33 146.0 92 73.9
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 9.6e-23 111.7 64 78.1


User provided reference genes

Program Settings