Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO407G0207 Papaver somniferum HOM05D002996 ORTHO05D003536 4.6e-149 531.2 261 100.0
PSO407G0242 Papaver somniferum HOM05D002996 ORTHO05D003536 3.9e-116 421.8 257 80.2
PSO170G1396 Papaver somniferum HOM05D002996 ORTHO05D003536 1.9e-115 419.5 257 80.2
PSO017G4487 Papaver somniferum HOM05D002996 ORTHO05D003536 2.1e-109 399.4 255 78.0
PSO478G4946 Papaver somniferum HOM05D002996 ORTHO05D003536 2.1e-109 399.4 255 78.0
PSO339G5742 Papaver somniferum HOM05D002996 ORTHO05D003536 3.9e-108 395.2 255 76.5
Migut.L00466 Erythranthe guttata HOM05D002996 ORTHO05D003536 8.1e-106 387.5 255 73.7
Lsat_1_v5_gn_2_81521 Lactuca sativa HOM05D002996 ORTHO05D003536 1.4e-105 386.7 255 74.1
ECA232G3169 Erigeron canadensis HOM05D002996 ORTHO05D003536 3.1e-105 385.6 255 72.5
GSVIVG01030858001 Vitis vinifera HOM05D002996 ORTHO05D003536 4.0e-105 385.2 255 73.7
Actinidia17659 Actinidia chinensis HOM05D002996 ORTHO05D003536 6.9e-105 384.4 255 73.7
CSS0002683 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 6.9e-105 384.4 255 74.1
CSS0016713 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 6.9e-105 384.4 255 72.9
ClCG05G010970 Citrullus lanatus HOM05D002996 ORTHO05D003536 6.9e-105 384.4 255 73.7
Haze_14227 Corylus avellana HOM05D002996 ORTHO05D003536 6.9e-105 384.4 255 74.5
Eucgr.F02825 Eucalyptus grandis HOM05D002996 ORTHO05D003536 6.9e-105 384.4 270 71.1
HanXRQChr09g0262271 Helianthus annuus HOM05D002996 ORTHO05D003536 6.9e-105 384.4 255 72.2
MD17G1256700 Malus domestica HOM05D002996 ORTHO05D003536 6.9e-105 384.4 255 74.5
Manes.01G115900 Manihot esculenta HOM05D002996 ORTHO05D003536 9.0e-105 384.0 255 73.7
TWI74G1665 Tripterygium wilfordii HOM05D002996 ORTHO05D003536 1.2e-104 383.6 255 73.7
arahy.Tifrunner.gnm1.ann1.RDL55E Arachis hypogaea HOM05D002996 ORTHO05D003536 2.0e-104 382.9 255 73.3
Manes.02G074800 Manihot esculenta HOM05D002996 ORTHO05D003536 2.6e-104 382.5 255 74.1
Sed0026936 Sechium edule HOM05D002996 ORTHO05D003536 2.6e-104 382.5 255 72.9
Prupe.3G159400 Prunus persica HOM05D002996 ORTHO05D003536 3.4e-104 382.1 255 73.3
CsaV3_3G021610 Cucumis sativus L. HOM05D002996 ORTHO05D003536 4.5e-104 381.7 255 72.9
HanXRQChr07g0193641 Helianthus annuus HOM05D002996 ORTHO05D003536 4.5e-104 381.7 255 73.7
TAR622G0566 Trochodendron aralioides HOM05D002996 ORTHO05D003536 4.5e-104 381.7 255 73.3
CANSAT78G2389 Cannabis sativa HOM05D002996 ORTHO05D003536 7.6e-104 380.9 255 73.7
CAN.G625.86 Capsicum annuum HOM05D002996 ORTHO05D003536 9.9e-104 380.6 255 73.3
Ciclev10010941m.g Citrus clementina HOM05D002996 ORTHO05D003536 1.3e-103 380.2 255 72.2
Peaxi162Scf00118g00223 Petunia axillaris HOM05D002996 ORTHO05D003536 1.3e-103 380.2 257 72.8
TWI77G0049 Tripterygium wilfordii HOM05D002996 ORTHO05D003536 1.3e-103 380.2 255 72.9
Dinv14879 Davidia involucrata HOM05D002996 ORTHO05D003536 1.7e-103 379.8 255 72.9
Nitab4.5_0004399g0040 Nicotiana tabacum HOM05D002996 ORTHO05D003536 1.7e-103 379.8 255 72.5
Potri.017G128300 Populus trichocarpa HOM05D002996 ORTHO05D003536 1.7e-103 379.8 255 72.5
MSTRG.3518 Avicennia marina HOM05D002996 ORTHO05D003536 2.2e-103 379.4 255 72.2
Cc07_g08150 Coffea canephora HOM05D002996 ORTHO05D003536 2.2e-103 379.4 255 73.3
Nitab4.5_0003360g0070 Nicotiana tabacum HOM05D002996 ORTHO05D003536 2.2e-103 379.4 255 72.2
SGA_v2.0_scaffold13G06389 Striga asiatica HOM05D002996 ORTHO05D003536 2.2e-103 379.4 255 72.9
TAR374G0579 Trochodendron aralioides HOM05D002996 ORTHO05D003536 2.2e-103 379.4 255 73.7
Cfa007838 Carpinus fangiana HOM05D002996 ORTHO05D003536 2.9e-103 379.0 255 73.7
Solyc03g043660.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 2.9e-103 379.0 255 72.2
Sopen03g007520 Solanum pennellii HOM05D002996 ORTHO05D003536 2.9e-103 379.0 255 72.2
MELO3C020288.2 Cucumis melo HOM05D002996 ORTHO05D003536 3.8e-103 378.6 255 72.9
CARHR077410 Cardamine hirsuta HOM05D002996 ORTHO05D003536 4.9e-103 378.3 260 72.3
ECA238G4747 Erigeron canadensis HOM05D002996 ORTHO05D003536 4.9e-103 378.3 255 72.9
Oeu000903.1 Olea europaea HOM05D002996 ORTHO05D003536 4.9e-103 378.3 263 72.2
ATR0053G010 Amborella trichopoda HOM05D002996 ORTHO05D003536 6.4e-103 377.9 255 72.5
Aqoxy3G00131_Aqoxy3G00132 Aquilegia oxysepala HOM05D002996 ORTHO05D003536 6.4e-103 377.9 255 71.8
MSTRG.15319 Avicennia marina HOM05D002996 ORTHO05D003536 8.4e-103 377.5 256 73.0
Duzib133G0038 Durio zibethinus HOM05D002996 ORTHO05D003536 8.4e-103 377.5 255 72.9
Thhalv10019951m.g Eutrema salsugineum HOM05D002996 ORTHO05D003536 8.4e-103 377.5 260 71.9
CAN.G11.11 Capsicum annuum HOM05D002996 ORTHO05D003536 1.9e-102 376.3 255 71.8
Sabra17G0107000 Salix brachista HOM05D002996 ORTHO05D003536 1.9e-102 376.3 255 71.4
Gohir.A11G162100 Gossypium hirsutum HOM05D002996 ORTHO05D003536 2.4e-102 375.9 255 72.5
CDE10G0501 Ceratophyllum demersum HOM05D002996 ORTHO05D003536 3.2e-102 375.6 260 70.8
Lalb_Chr15g0084771 Lupinus albus HOM05D002996 ORTHO05D003536 3.2e-102 375.6 255 72.2
Rhsim10G0079500 Rhododendron simsii HOM05D002996 ORTHO05D003536 3.2e-102 375.6 260 71.2
Atru.chr1.1814 Acer truncatum HOM05D002996 ORTHO05D003536 4.2e-102 375.2 255 72.5
AL3G13060 Arabidopsis lyrata HOM05D002996 ORTHO05D003536 5.5e-102 374.8 260 71.9
BolC1t05834H Brassica oleracea HOM05D002996 ORTHO05D003536 7.1e-102 374.4 260 71.9
BNapus_Darmor_BZH_scaffold_162p00130 Brassica napus HOM05D002996 ORTHO05D003536 9.3e-102 374.0 260 71.5
Gohir.D11G168300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 9.3e-102 374.0 255 72.2
Gorai.007G179800 Gossypium raimondii HOM05D002996 ORTHO05D003536 9.3e-102 374.0 255 72.2
PGR004G1736 Punica granatum HOM05D002996 ORTHO05D003536 9.3e-102 374.0 255 71.4
RcHm_v2.0_Chr7g0220101 Rosa chinensis HOM05D002996 ORTHO05D003536 9.3e-102 374.0 255 71.4
BcaC09g47743 Brassica carinata HOM05D002996 ORTHO05D003536 1.2e-101 373.6 260 71.9
Carub.0003s0254 Capsella rubella HOM05D002996 ORTHO05D003536 1.2e-101 373.6 260 71.5
QL11p004079 Quercus lobata HOM05D002996 ORTHO05D003536 1.2e-101 373.6 255 71.4
VMungo1383G2581 Vigna mungo HOM05D002996 ORTHO05D003536 1.2e-101 373.6 255 72.2
Lsat_1_v5_gn_4_154680 Lactuca sativa HOM05D002996 ORTHO05D003536 1.6e-101 373.2 255 70.6
AT3G03380 Arabidopsis thaliana HOM05D002996 ORTHO05D003536 2.1e-101 372.9 260 71.5
Gohir.A08G052700 Gossypium hirsutum HOM05D002996 ORTHO05D003536 2.1e-101 372.9 255 71.8
Solyc02g091410.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 2.1e-101 372.9 255 71.4
Sopen02g036030 Solanum pennellii HOM05D002996 ORTHO05D003536 2.1e-101 372.9 255 71.4
Medtr3g067695 Medicago truncatula HOM05D002996 ORTHO05D003536 2.7e-101 372.5 254 70.9
Glyma.18G039000 Glycine max HOM05D002996 ORTHO05D003536 4.6e-101 371.7 255 71.4
Ah.16g101290 Amaranthus hybridus HOM05D002996 ORTHO05D003536 6.0e-101 371.3 254 72.0
Phvul.001G231700 Phaseolus vulgaris HOM05D002996 ORTHO05D003536 6.0e-101 371.3 255 71.0
Medtr3g067690 Medicago truncatula HOM05D002996 ORTHO05D003536 7.9e-101 370.9 255 71.4
arahy.Tifrunner.gnm1.ann1.GD0F1M Arachis hypogaea HOM05D002996 ORTHO05D003536 1.0e-100 370.5 276 67.8
A06p26370 Brassica napus HOM05D002996 ORTHO05D003536 1.0e-100 370.5 259 71.4
BNapus_Darmor_BZH_scaffold_78p00120 Brassica napus HOM05D002996 ORTHO05D003536 1.0e-100 370.5 259 71.4
BraA01t04583Z Brassica rapa HOM05D002996 ORTHO05D003536 1.0e-100 370.5 259 71.4
FvH4_5g27890 Fragaria vesca HOM05D002996 ORTHO05D003536 1.0e-100 370.5 255 70.6
FAN18G1791 Fragaria x ananassa HOM05D002996 ORTHO05D003536 1.0e-100 370.5 255 70.6
Gohir.D08G062300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 1.0e-100 370.5 255 71.4
Gorai.004G064500 Gossypium raimondii HOM05D002996 ORTHO05D003536 1.0e-100 370.5 255 71.4
Hund16206 Selenicereus undatus HOM05D002996 ORTHO05D003536 1.3e-100 370.2 254 70.9
Sc10g0000820 Simmondsia chinensis HOM05D002996 ORTHO05D003536 1.3e-100 370.2 254 71.3
AUR62023190 Chenopodium quinoa HOM05D002996 ORTHO05D003536 1.8e-100 369.8 254 70.9
AUR62023237 Chenopodium quinoa HOM05D002996 ORTHO05D003536 1.8e-100 369.8 254 70.9
Aa31LG5G13900 Aethionema arabicum HOM05D002996 ORTHO05D003536 2.3e-100 369.4 255 72.2
BcaC05g30278 Brassica carinata HOM05D002996 ORTHO05D003536 2.3e-100 369.4 255 72.2
THA.LOC104827237 Tarenaya hassleriana HOM05D002996 ORTHO05D003536 2.3e-100 369.4 255 71.4
Rhsim08G0086100 Rhododendron simsii HOM05D002996 ORTHO05D003536 3.0e-100 369.0 296 63.2
Ca_08163_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 3.9e-100 368.6 255 71.0
Duzib211G0161 Durio zibethinus HOM05D002996 ORTHO05D003536 5.1e-100 368.2 255 71.8
Glyma.11G218000 Glycine max HOM05D002996 ORTHO05D003536 5.1e-100 368.2 255 70.6
Sp3g02390 Schrenkiella parvula HOM05D002996 ORTHO05D003536 5.1e-100 368.2 261 70.9
Thecc.04G120500 Theobroma cacao HOM05D002996 ORTHO05D003536 5.1e-100 368.2 255 71.8
EL10Ac2g04480 Beta vulgaris HOM05D002996 ORTHO05D003536 6.7e-100 367.9 254 70.5
A05p43840 Brassica napus HOM05D002996 ORTHO05D003536 6.7e-100 367.9 255 72.2
BraA05t23122Z Brassica rapa HOM05D002996 ORTHO05D003536 8.7e-100 367.5 255 72.2
Lj6g0006116 Lotus japonicus HOM05D002996 ORTHO05D003536 8.7e-100 367.5 254 70.5
Potri.004G088600 Populus trichocarpa HOM05D002996 ORTHO05D003536 8.7e-100 367.5 263 69.2
Psat5g122480 Pisum sativum HOM05D002996 ORTHO05D003536 1.1e-99 367.1 254 70.5
BcaC05g30533 Brassica carinata HOM05D002996 ORTHO05D003536 1.5e-99 366.7 260 70.8
Sabra04G0059000 Salix brachista HOM05D002996 ORTHO05D003536 2.5e-99 365.9 263 68.8
C05p63430 Brassica napus HOM05D002996 ORTHO05D003536 3.3e-99 365.5 260 70.8
BolC5t35007H Brassica oleracea HOM05D002996 ORTHO05D003536 3.3e-99 365.5 260 70.8
TPR.G27148 Trifolium pratense HOM05D002996 ORTHO05D003536 4.3e-99 365.2 254 70.1
Oeu047419.3 Olea europaea HOM05D002996 ORTHO05D003536 9.6e-99 364.0 277 67.1
Nn4g24147 Nelumbo nucifera HOM05D002996 ORTHO05D003536 4.0e-97 358.6 255 71.0
SMO361G0084 Selaginella moellendorffii HOM05D002996 ORTHO05D003536 9.0e-97 357.5 258 68.2
Mapoly0003s0272 Marchantia polymorpha HOM05D002996 ORTHO05D003536 1.5e-96 356.7 252 68.3
Potri.004G088700 Populus trichocarpa HOM05D002996 ORTHO05D003536 2.0e-96 356.3 260 67.3
Manes.01G116000 Manihot esculenta HOM05D002996 ORTHO05D003536 2.9e-95 352.4 256 67.2
Migut.H00264 Erythranthe guttata HOM05D002996 ORTHO05D003536 3.8e-95 352.1 260 67.3
Ca_17109_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 5.5e-94 348.2 290 61.7
Pp3c2_7790 Physcomitrium patens HOM05D002996 ORTHO05D003536 7.1e-94 347.8 254 68.5
Peaxi162Scf00003g00013 Petunia axillaris HOM05D002996 ORTHO05D003536 9.3e-94 347.4 255 69.4
Rhsim10G0079400 Rhododendron simsii HOM05D002996 ORTHO05D003536 3.0e-92 342.4 333 55.3
vmacro18050 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 5.1e-92 341.7 260 67.3
Sabra04G0059100 Salix brachista HOM05D002996 ORTHO05D003536 1.5e-91 340.1 285 60.7
CDE10G1224 Ceratophyllum demersum HOM05D002996 ORTHO05D003536 2.5e-91 339.3 222 74.3
Pp3c1_28480 Physcomitrium patens HOM05D002996 ORTHO05D003536 9.6e-91 337.4 265 64.2
Cre03.g180650 Chlamydomonas reinhardtii HOM05D002996 ORTHO05D003536 5.0e-87 325.1 258 62.4
MBI16_g14302_MAGBIO Magnolia biondii HOM05D002996 ORTHO05D003536 3.1e-81 305.8 204 73.5
COL.COLO4_15723 Corchorus olitorius HOM05D002996 ORTHO05D003536 1.5e-80 303.5 208 72.6
FAN08G1319 Fragaria x ananassa HOM05D002996 ORTHO05D003536 1.8e-76 290.0 198 71.2
SEGI_40820 Sequoiadendron giganteum HOM05D002996 ORTHO05D003536 3.3e-75 285.8 210 69.0
TPR.G27497 Trifolium pratense HOM05D002996 ORTHO05D003536 1.4e-73 280.4 248 59.3
SalBow1G7030 Salvia bowleyana HOM05D002996 ORTHO05D003536 9.1e-73 277.7 250 60.0
Zm00001eb252510 Zea mays HOM05D002996 ORTHO05D003536 3.4e-72 275.8 254 58.7
MCO10G011 Micromonas commoda HOM05D002996 ORTHO05D003536 2.5e-70 269.6 249 54.2
Dinv19011 Davidia involucrata HOM05D002996 ORTHO05D003536 8.8e-68 261.2 160 76.2
Cpa.g.c28186.1 Carica papaya HOM05D002996 ORTHO05D003536 6.3e-66 255.0 189 67.7
CsaV3_1G027780 Cucumis sativus L. HOM05D002996 ORTHO05D003536 3.8e-63 245.7 178 67.4
Cfa025176 Carpinus fangiana HOM05D002996 ORTHO05D003536 2.5e-62 243.0 257 48.2
HanXRQChr09g0262281 Helianthus annuus HOM05D002996 ORTHO05D003536 4.7e-61 238.8 149 75.8
Lj2C435G10 Lonicera japonica HOM05D002996 ORTHO05D003536 5.7e-59 231.9 160 73.8
CSS0044512 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 1.1e-54 217.6 129 78.3
vmacro05508 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.5e-54 217.2 148 69.6
Nitab4.5_0002366g0050 Nicotiana tabacum HOM05D002996 ORTHO05D003536 2.5e-54 216.5 156 69.9
vmacro05511 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 4.7e-53 212.2 338 40.2
Os02g0712000 Oryza sativa ssp. japonica HOM05D002996 ORTHO05D003536 1.0e-52 211.1 160 69.4
PGSC0003DMG402030647 Solanum tuberosum HOM05D002996 ORTHO05D003536 3.0e-52 209.5 129 75.2
Zm00001eb064060 Zea mays HOM05D002996 ORTHO05D003536 8.3e-42 174.9 103 79.6
Zm00001eb218380 Zea mays HOM05D002996 ORTHO05D003536 4.1e-41 172.6 103 78.6
DCAR_010737 Daucus carota HOM05D002996 ORTHO05D003536 1.2e-40 171.0 128 67.2
TPR.G1005 Trifolium pratense HOM05D002996 ORTHO05D003536 5.7e-35 152.1 127 63.0
Lsat_1_v5_gn_1_126760 Lactuca sativa HOM05D002996 ORTHO05D004698 1.6e-32 144.1 96 74.0
CiPaw.03G068800 Carya illinoinensis HOM05D002996 ORTHO05D003536 8.0e-29 131.7 90 72.2
DCAR_010738 Daucus carota HOM05D002996 ORTHO05D003536 1.4e-28 131.0 90 65.6
vmacro05503 Vaccinium macrocarpon HOM05D002996 ORTHO05D004756 1.4e-28 131.0 85 74.1
Nitab4.5_0002366g0060 Nicotiana tabacum HOM05D002996 ORTHO05D003536 2.3e-28 130.2 83 71.1
SalBow7G0652 Salvia bowleyana HOM05D002996 ORTHO05D003536 4.0e-28 129.4 90 71.1
CiPaw.03G068900 Carya illinoinensis HOM05D002996 ORTHO05D003536 5.2e-28 129.0 84 71.4
Hma1.2p1_0832F.1_g225610 Hydrangea macrophylla HOM05D002996 ORTHO05D003536 1.5e-27 127.5 83 67.5
Zm00001eb125510 Zea mays HOM05D002996 ORTHO05D003536 3.7e-26 122.9 70 81.4
CDE11G1125 Ceratophyllum demersum HOM05D002996 ORTHO05D003536 2.4e-25 120.2 82 68.3
PSO407G0426 Papaver somniferum HOM05D002996 ORTHO05D003536 6.2e-21 105.5 73 72.6
FAN04G0036 Fragaria x ananassa HOM05D002996 ORTHO05D003536 3.1e-20 103.2 69 65.2
HanXRQChr06g0182761 Helianthus annuus HOM05D002996 ORTHO05D003536 6.8e-20 102.1 56 82.1
GSVIVG01037949001 Vitis vinifera HOM05D002996 ORTHO05D003536 2.6e-19 100.1 88 54.5
vmacro05504 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.9e-17 94.0 70 62.9
Nitab4.5_0000465g0040 Nicotiana tabacum HOM05D002996 ORTHO05D003536 5.4e-17 92.4 60 68.3
Lj2C435G4 Lonicera japonica HOM05D002996 ORTHO05D003536 9.2e-17 91.7 60 66.7
Lsat_1_v5_gn_9_17080 Lactuca sativa HOM05D002996 ORTHO05D003536 4.6e-16 89.4 72 58.3
Cpa.g.c35938 Carica papaya HOM05D002996 ORTHO05D003536 7.8e-16 88.6 70 62.9
MBI16_g14303_MAGBIO Magnolia biondii HOM05D002996 ORTHO05D003536 2.3e-15 87.0 54 74.1
Nitab4.5_0008435g0040 Nicotiana tabacum HOM05D002996 ORTHO05D025899 1.1e-14 84.7 81 56.8
Nitab4.5_0026266g0010 Nicotiana tabacum HOM05D002996 ORTHO05D025899 9.5e-14 81.6 81 54.3
Manes.04G143783 Manihot esculenta HOM05D002996 ORTHO05D003536 2.8e-13 80.1 56 67.9
Nitab4.5_0011266g0010 Nicotiana tabacum HOM05D002996 ORTHO05D025899 2.3e-12 77.0 49 71.4
Zm00001eb156170 Zea mays HOM05D002996 ORTHO05D025899 1.9e-09 67.4 39 79.5
Zm00001eb156180 Zea mays HOM05D002996 ORTHO05D004756 1.9e-09 67.4 39 79.5
CsaV3_1G027790 Cucumis sativus L. HOM05D002996 ORTHO05D003536 9.2e-09 65.1 34 82.4
Lsat_1_v5_gn_2_24061 Lactuca sativa HOM05D002996 ORTHO05D003536 1.1e-06 58.2 67 41.8
Lsat_1_v5_gn_8_84061 Lactuca sativa HOM05D002292 ORTHO05D003256 1.1e-06 58.2 92 40.2


User provided reference genes

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