Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO407G0063 Papaver somniferum HOM05D004345 ORTHO05D005192 2.4e-187 658.7 328 100.0
PSO210G0382 Papaver somniferum HOM05D004345 ORTHO05D005192 5.1e-174 614.4 328 93.0
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 2.5e-173 612.1 328 92.7
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 2.1e-58 230.3 355 40.6
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 4.1e-54 216.1 341 39.9
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 1.6e-50 204.1 326 38.0
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 2.7e-50 203.4 353 36.0
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.4e-49 201.1 335 39.1
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 2.3e-49 200.3 335 39.1
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 3.0e-49 199.9 326 37.4
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.1e-48 198.0 335 39.1
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.5e-48 197.6 327 37.3
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 2.0e-48 197.2 340 36.8
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 4.4e-48 196.1 329 37.1
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 1.3e-47 194.5 335 38.5
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.2e-47 193.7 328 36.9
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 2.2e-47 193.7 334 37.7
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 8.2e-47 191.8 339 34.8
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 1.8e-46 190.7 339 33.9
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 4.1e-46 189.5 323 38.1
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 4.1e-46 189.5 333 35.1
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 9.1e-46 188.3 330 36.4
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 2.6e-45 186.8 332 36.7
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 5.9e-45 185.7 331 35.0
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 2.2e-44 183.7 346 35.5
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 8.5e-44 181.8 332 35.2
PSO384G0273 Papaver somniferum HOM05D004345 ORTHO05D005192 8.5e-44 181.8 112 78.6
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 1.1e-43 181.4 335 34.6
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 1.5e-43 181.0 326 35.6
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 9.4e-43 178.3 332 34.9
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 4.7e-42 176.0 347 34.0
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.0e-41 174.9 332 34.0
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 1.4e-41 174.5 333 35.4
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.8e-41 174.1 339 34.8
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 2.6e-40 170.2 330 33.6
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 9.7e-40 168.3 329 33.1
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 6.3e-39 165.6 332 33.7
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 6.3e-39 165.6 329 33.4
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 1.8e-38 164.1 342 32.7
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 7.0e-38 162.2 327 32.4
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 7.0e-38 162.2 328 32.3
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 1.6e-37 161.0 328 36.0
Phvul.011G090800 Phaseolus vulgaris HOM05D004345 ORTHO05D005192 5.9e-37 159.1 327 33.0
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 5.9e-37 159.1 339 33.9
EL10Ac9g22980 Beta vulgaris HOM05D000200 ORTHO05D001546 2.2e-36 157.1 335 33.7
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 6.5e-36 155.6 324 33.3
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 6.5e-36 155.6 305 34.4
Duzib116G0224 Durio zibethinus HOM05D004345 ORTHO05D005192 6.5e-36 155.6 343 30.3
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 8.5e-36 155.2 337 32.6
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 8.5e-36 155.2 247 35.6
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 1.9e-35 154.1 327 30.9
BolC5t33472H Brassica oleracea HOM05D004345 ORTHO05D005192 3.2e-35 153.3 327 33.0
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 3.2e-35 153.3 329 31.9
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 3.2e-35 153.3 328 33.2
Sp3g16450 Schrenkiella parvula HOM05D004345 ORTHO05D005192 3.2e-35 153.3 323 32.8
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 3.2e-35 153.3 321 33.0
PGR044G2251 Punica granatum HOM05D004345 ORTHO05D005192 5.5e-35 152.5 310 34.5
A05p31330 Brassica napus HOM05D004345 ORTHO05D005192 7.2e-35 152.1 326 32.5
BraA05t21971Z Brassica rapa HOM05D004345 ORTHO05D005192 1.2e-34 151.4 327 33.3
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 1.2e-34 151.4 324 32.4
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 2.7e-34 150.2 283 33.9
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 2.7e-34 150.2 324 32.1
C05p47630 Brassica napus HOM05D004345 ORTHO05D005192 1.4e-33 147.9 322 32.6
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 2.3e-33 147.1 327 30.3
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 8.8e-33 145.2 337 31.5
Thhalv10003730m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 8.8e-33 145.2 322 32.9
Lj8C411T10 Lonicera japonica HOM05D004345 ORTHO05D005192 2.0e-32 144.1 258 35.7
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 2.6e-32 143.7 333 32.1
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 7.5e-32 142.1 323 32.8
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 1.7e-31 141.0 328 31.7
CDE12G0342 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 2.2e-31 140.6 339 32.4
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 2.2e-31 140.6 324 33.0
Thhalv10020051m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 6.3e-31 139.0 325 31.4
QL07p001298 Quercus lobata HOM05D004345 ORTHO05D005192 8.3e-31 138.7 219 38.8
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 1.8e-30 137.5 340 32.6
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 1.8e-30 137.5 317 30.6
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 2.4e-30 137.1 331 31.4
AT3G18310 Arabidopsis thaliana HOM05D004345 ORTHO05D005192 2.4e-30 137.1 338 30.2
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 2.4e-30 137.1 321 29.9
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 1.6e-29 134.4 326 31.9
Migut.N02797 Erythranthe guttata HOM05D004345 ORTHO05D005192 2.7e-29 133.7 342 31.9
HanXRQChr07g0196981 Helianthus annuus HOM05D004345 ORTHO05D005192 1.3e-28 131.3 326 29.1
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 2.2e-28 130.6 240 35.4
THA.LOC104807021 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 2.9e-28 130.2 284 33.8
MBI07_g44810_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 1.9e-27 127.5 343 33.2
Hund17623 Selenicereus undatus HOM05D004345 ORTHO05D005192 1.2e-26 124.8 342 29.5
Hund25524 Selenicereus undatus HOM05D004345 ORTHO05D005192 1.4e-25 121.3 346 29.8
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 2.2e-23 114.0 314 30.3
Ah.03g148550 Amaranthus hybridus HOM05D004345 ORTHO05D005192 1.1e-22 111.7 250 31.2
DCAR_009432 Daucus carota HOM05D004345 ORTHO05D005192 1.1e-22 111.7 286 27.6
ECA238G4368 Erigeron canadensis HOM05D004345 ORTHO05D005192 1.4e-22 111.3 311 30.2
CiPaw.12G047000 Carya illinoinensis HOM05D004345 ORTHO05D005192 4.1e-22 109.8 158 39.9
Peaxi162Scf00434g00066 Petunia axillaris HOM05D004345 ORTHO05D005192 7.0e-22 109.0 328 26.8
Nitab4.5_0008354g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 9.2e-22 108.6 326 27.0
Nitab4.5_0001423g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 1.6e-21 107.8 319 28.5
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 7.8e-21 105.5 368 29.1
ECA234G4090 Erigeron canadensis HOM05D004345 ORTHO05D005192 7.8e-21 105.5 327 28.7
Sopen01g042020 Solanum pennellii HOM05D004345 ORTHO05D005192 7.8e-21 105.5 324 26.9
unitig_744.g24116 Utricularia gibba HOM05D004345 ORTHO05D005192 2.9e-20 103.6 325 27.1
SalBow3G2318 Salvia bowleyana HOM05D004345 ORTHO05D005192 6.6e-20 102.4 329 30.1
Solyc01g098450.4 Solanum lycopersicum HOM05D004345 ORTHO05D005192 2.5e-19 100.5 327 26.3
Dinv39346 Davidia involucrata HOM05D004345 ORTHO05D005192 1.2e-16 91.7 113 43.4
ATR0964G004 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.2e-15 87.4 270 30.4
Zm00001eb399070 Zea mays HOM05D004345 ORTHO05D005192 4.9e-15 86.3 326 26.4
ATR0792G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 6.4e-15 85.9 250 32.0
Aqoxy7G01729 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 6.4e-15 85.9 129 38.0
HPP92_000827 Vanilla planifolia HOM05D004345 ORTHO05D005192 1.4e-14 84.7 324 26.9
BcaB01g01503 Brassica carinata HOM05D004345 ORTHO05D005192 3.2e-14 83.6 147 36.1
Nitab4.5_0001903g0100 Nicotiana tabacum HOM05D004345 ORTHO05D005192 7.0e-14 82.4 247 29.1
Cc07_g15690 Coffea canephora HOM05D004345 ORTHO05D005192 9.2e-14 82.0 346 25.4
MBI07_g37626_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 1.2e-13 81.6 280 27.9
ATR0661G336 Amborella trichopoda HOM05D004345 ORTHO05D005192 4.6e-13 79.7 357 27.7
BcaC05g28685 Brassica carinata HOM05D004345 ORTHO05D005192 4.6e-13 79.7 142 35.2
Os03g0240400 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 5.9e-13 79.3 332 22.6
ATR0194G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 4.3e-11 73.2 250 30.0
ATR0446G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 5.6e-11 72.8 206 32.5
ATR0560G003 Amborella trichopoda HOM05D004345 ORTHO05D005192 3.6e-10 70.1 178 32.6
CDE09G0757 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 1.4e-09 68.2 178 34.3
CDE09G0455 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 1.8e-09 67.8 330 25.8
Os09g0104700 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 3.7e-07 60.1 329 22.5
Oeu011014.1 Olea europaea HOM05D004345 ORTHO05D005192 6.4e-07 59.3 145 33.1
Oeu028553.1 Olea europaea HOM05D004345 ORTHO05D005192 5.4e-06 56.2 127 34.6
RcHm_v2.0_Chr6g0264731 Rosa chinensis HOM05D004345 ORTHO05D005192 7.0e-06 55.8 133 29.3
PGSC0003DMG403028564 Solanum tuberosum HOM05D004345 ORTHO05D005192 9.2e-06 55.5 132 28.0


User provided reference genes

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