Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 3.5e-88 328.2 154 100.0
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 7.7e-88 327.0 154 99.4
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 7.7e-64 247.3 154 78.6
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 1.6e-61 239.6 154 72.1
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 5.2e-60 234.6 154 72.7
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 5.2e-60 234.6 154 76.6
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 8.9e-60 233.8 155 76.1
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 5.7e-59 231.1 154 76.0
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.3e-58 229.9 154 75.3
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 1.3e-58 229.9 154 75.3
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 2.2e-58 229.2 154 69.5
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 2.9e-58 228.8 155 71.6
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 6.3e-58 227.6 154 70.8
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 6.3e-58 227.6 154 70.8
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 8.3e-58 227.3 154 74.7
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 8.3e-58 227.3 154 74.7
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 2.4e-57 225.7 154 70.8
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 5.4e-57 224.6 153 71.9
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 9.2e-57 223.8 141 75.2
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 9.2e-57 223.8 154 69.5
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.7e-56 222.2 154 72.1
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 3.5e-56 221.9 141 75.9
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 3.5e-56 221.9 155 70.3
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 5.9e-56 221.1 154 70.8
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 7.8e-56 220.7 141 75.2
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 7.8e-56 220.7 154 70.1
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.0e-55 220.3 153 69.9
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.3e-55 219.9 159 69.2
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 3.9e-55 218.4 157 70.7
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 8.6e-55 217.2 154 68.2
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 1.9e-54 216.1 149 68.5
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 1.9e-54 216.1 153 70.6
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.6e-53 213.0 151 70.9
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 2.1e-53 212.6 142 72.5
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 2.8e-53 212.2 154 67.5
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 3.6e-53 211.8 141 70.9
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 6.1e-53 211.1 151 72.8
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 6.1e-53 211.1 146 68.5
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 3.1e-52 208.8 151 70.2
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 4.0e-52 208.4 151 68.9
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 8.9e-52 207.2 151 69.5
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 8.9e-52 207.2 141 71.6
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 1.5e-51 206.5 153 67.3
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 1.5e-51 206.5 141 70.9
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 2.0e-51 206.1 154 67.5
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 4.4e-51 204.9 141 68.1
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 9.8e-51 203.8 154 66.9
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 2.9e-50 202.2 136 70.6
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 2.9e-50 202.2 141 70.9
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 2.9e-50 202.2 141 69.5
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 6.4e-50 201.1 151 67.5
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 1.4e-49 199.9 141 68.8
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 1.4e-49 199.9 150 66.0
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 1.4e-49 199.9 145 68.3
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 2.4e-49 199.1 151 66.9
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 2.4e-49 199.1 140 69.3
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 3.2e-49 198.7 151 66.9
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 3.2e-49 198.7 140 68.6
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 5.4e-49 198.0 140 69.3
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 5.4e-49 198.0 141 68.1
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 5.4e-49 198.0 147 68.0
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 1.2e-48 196.8 146 66.4
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.6e-48 196.4 149 64.4
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 1.6e-48 196.4 147 67.3
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.0e-47 193.7 150 64.0
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 1.3e-47 193.4 141 68.8
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 3.0e-47 192.2 141 68.8
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 3.9e-47 191.8 147 63.3
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.1e-46 190.3 141 68.1
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 1.1e-46 190.3 144 66.0
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 7.3e-46 187.6 147 63.9
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 6.2e-45 184.5 142 65.5
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.1e-44 183.7 143 62.9
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 2.4e-41 172.6 152 57.9
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 6.0e-40 167.9 117 71.8
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 2.0e-35 152.9 120 57.5
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 5.8e-35 151.4 120 56.7
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 5.8e-35 151.4 120 56.7
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 5.8e-35 151.4 120 56.7
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 5.8e-35 151.4 120 56.7
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 9.9e-35 150.6 143 51.7
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 1.3e-34 150.2 120 55.8
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 1.3e-34 150.2 120 55.8
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 1.7e-34 149.8 142 53.5
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 6.4e-34 147.9 120 57.5
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 2.4e-33 146.0 120 56.7
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 3.2e-33 145.6 120 55.8
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 3.2e-33 145.6 136 51.5
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 3.2e-33 145.6 131 57.3
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 5.4e-33 144.8 120 55.8
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 4.4e-27 125.2 136 48.5
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 3.0e-23 112.5 81 66.7
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 2.6e-19 99.4 62 74.2
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 4.9e-18 95.1 78 60.3
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 1.9e-17 93.2 73 65.8
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 2.1e-16 89.7 70 71.4
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 7.9e-16 87.8 118 36.4
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 6.6e-15 84.7 118 36.4


User provided reference genes

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