Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-49 197.6 98 100.0
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-49 197.6 98 100.0
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-49 197.6 98 100.0
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 2.6e-41 171.8 98 84.7
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-40 169.9 98 83.7
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-37 159.8 98 77.6
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 5.1e-37 157.5 98 75.5
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 3.3e-36 154.8 99 76.8
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.3e-36 154.8 98 73.5
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 4.8e-35 151.0 98 76.5
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-34 149.8 98 71.4
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 5.3e-34 147.5 98 66.3
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 5.3e-34 147.5 98 70.4
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 6.9e-34 147.1 98 70.4
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 9.1e-34 146.7 98 69.4
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-33 144.8 98 69.4
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-33 144.8 98 68.4
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-33 144.8 98 68.4
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-32 142.5 98 68.4
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 8.5e-32 140.2 97 67.0
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-31 139.8 98 66.3
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.4e-31 139.4 98 69.4
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 7.9e-30 133.7 98 62.2
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.7e-27 125.9 98 60.2
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 8.2e-27 123.6 98 60.2
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 1.8e-26 122.5 100 60.0
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.4e-26 122.1 98 60.2
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 7.0e-26 120.6 98 56.1
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 1.2e-25 119.8 98 58.2
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.2e-25 119.8 98 58.2
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 1.5e-25 119.4 98 56.1
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 1.5e-25 119.4 98 57.1
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.0e-25 119.0 98 54.1
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.0e-25 119.0 98 54.1
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 2.6e-25 118.6 98 57.1
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 2.6e-25 118.6 98 55.1
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.6e-25 118.6 98 55.1
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 2.6e-25 118.6 98 57.1
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 3.5e-25 118.2 98 55.1
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 3.5e-25 118.2 98 59.2
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 3.5e-25 118.2 98 55.1
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 4.5e-25 117.9 98 54.1
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 4.5e-25 117.9 98 57.1
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 5.9e-25 117.5 96 55.2
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 5.9e-25 117.5 96 58.3
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 7.7e-25 117.1 98 57.1
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 7.7e-25 117.1 98 57.1
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.0e-24 116.7 98 56.1
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 1.0e-24 116.7 98 57.1
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.0e-24 116.7 98 57.1
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.7e-24 115.9 98 53.1
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 1.7e-24 115.9 98 55.1
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.2e-24 115.5 98 56.1
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.2e-24 115.5 98 56.1
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 57.1
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 54.1
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 54.1
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 54.1
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 57.1
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 53.1
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 55.1
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 55.1
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 2.9e-24 115.2 98 57.1
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 3.8e-24 114.8 98 55.1
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 3.8e-24 114.8 98 54.1
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.8e-24 114.8 98 56.1
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.8e-24 114.8 98 56.1
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 3.8e-24 114.8 98 58.2
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 3.8e-24 114.8 98 55.1
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 5.0e-24 114.4 98 55.1
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 5.0e-24 114.4 98 57.1
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 5.0e-24 114.4 98 53.1
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 5.0e-24 114.4 98 54.1
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 6.5e-24 114.0 98 54.1
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 6.5e-24 114.0 98 54.1
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 6.5e-24 114.0 98 52.0
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 6.5e-24 114.0 98 54.1
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 8.5e-24 113.6 98 55.1
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 8.5e-24 113.6 98 56.1
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 8.5e-24 113.6 98 57.1
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 1.1e-23 113.2 98 52.0
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.5e-23 112.8 98 55.1
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 1.5e-23 112.8 98 56.1
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.9e-23 112.5 98 55.1
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.9e-23 112.5 98 52.0
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.9e-23 112.5 98 57.1
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.9e-23 112.5 98 53.1
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 3.2e-23 111.7 98 56.1
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 4.2e-23 111.3 98 53.1
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 4.2e-23 111.3 98 56.1
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 7.2e-23 110.5 98 56.1
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 7.2e-23 110.5 98 53.1
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 7.2e-23 110.5 98 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 9.4e-23 110.2 98 51.0
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.2e-22 109.8 98 54.1
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.2e-22 109.8 98 54.1
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 1.6e-22 109.4 98 54.1
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.6e-22 109.4 98 52.0
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 1.6e-22 109.4 98 54.1
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 1.6e-22 109.4 98 53.1
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.6e-22 109.4 98 54.1
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 1.6e-22 109.4 98 54.1
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.6e-22 109.4 98 53.1
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 2.1e-22 109.0 98 57.1
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 2.7e-22 108.6 98 53.1
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 3.6e-22 108.2 98 55.1
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 3.6e-22 108.2 98 55.1
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 3.6e-22 108.2 98 53.1
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 3.6e-22 108.2 98 52.0
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 4.7e-22 107.8 98 52.0
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 4.7e-22 107.8 98 52.0
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 4.7e-22 107.8 98 51.0
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 8.0e-22 107.1 98 51.0
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 8.0e-22 107.1 98 52.0
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 8.0e-22 107.1 98 52.0
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.0e-21 106.7 98 51.0
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 1.4e-21 106.3 99 53.5
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.0e-21 105.1 98 53.1
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 4.0e-21 104.8 98 51.0
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 6.7e-21 104.0 98 52.0
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.1e-20 103.2 113 48.7
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.6e-20 102.1 113 48.7
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 5.7e-20 100.9 98 50.0
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 2.4e-18 95.5 98 45.9
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.5e-15 86.3 98 45.9
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-15 85.9 98 43.9
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 4.2e-15 84.7 73 57.5
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 8.0e-14 80.5 98 46.9
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 8.8e-13 77.0 54 72.2
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 7.5e-12 73.9 171 29.2
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.8e-11 72.0 59 57.6
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.8e-11 71.2 98 39.8
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 4.1e-10 68.2 35 97.1
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 1.0e-08 63.5 97 35.1
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 1.1e-07 60.1 98 33.7
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 7.2e-07 57.4 97 36.1
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 9.4e-07 57.0 98 31.6
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 2.7e-06 55.5 96 35.4


User provided reference genes

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