Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO386G0162 Papaver somniferum HOM05D002144 ORTHO05D002170 9.3e-52 206.8 123 100.0
PSO223G0023 Papaver somniferum HOM05D002144 ORTHO05D002170 6.0e-51 204.1 123 95.1
PSO223G0021 Papaver somniferum HOM05D002144 ORTHO05D002170 9.6e-41 170.2 124 74.2
PSO386G0143 Papaver somniferum HOM05D002144 ORTHO05D002170 1.3e-40 169.9 124 75.0
Nn8g38544 Nelumbo nucifera HOM05D002144 ORTHO05D002170 8.2e-24 114.0 128 58.6
ATR0681G069 Amborella trichopoda HOM05D002144 ORTHO05D002170 2.4e-23 112.5 129 54.3
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 2.4e-23 112.5 128 52.3
MD09G1176600 Malus domestica HOM05D002144 ORTHO05D002170 1.7e-21 106.3 128 55.5
Aqoxy7G00990 Aquilegia oxysepala HOM05D002144 ORTHO05D002170 6.5e-21 104.4 129 57.4
MD17G1150200 Malus domestica HOM05D002144 ORTHO05D002170 1.1e-20 103.6 128 54.7
Dinv37840 Davidia involucrata HOM05D002144 ORTHO05D002170 1.6e-19 99.8 128 46.9
FvH4_6g35330 Fragaria vesca HOM05D002144 ORTHO05D002170 2.1e-19 99.4 130 45.4
FAN09G1588 Fragaria x ananassa HOM05D002144 ORTHO05D002170 2.1e-19 99.4 130 45.4
Duzib192G0893 Durio zibethinus HOM05D002144 ORTHO05D002170 4.6e-19 98.2 130 53.1
GSVIVG01016701001 Vitis vinifera HOM05D002144 ORTHO05D002170 1.0e-18 97.1 129 48.1
MBI13_g01666_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 1.8e-18 96.3 128 59.4
RcHm_v2.0_Chr2g0146781 Rosa chinensis HOM05D002144 ORTHO05D002170 2.3e-18 95.9 130 52.3
Duzib235G0612 Durio zibethinus HOM05D002144 ORTHO05D002170 6.7e-18 94.4 131 46.6
Gohir.A05G138200 Gossypium hirsutum HOM05D002144 ORTHO05D002170 6.7e-18 94.4 130 45.4
Actinidia24441 Actinidia chinensis HOM05D002144 ORTHO05D002170 8.8e-18 94.0 136 50.0
CiPaw.01G214500 Carya illinoinensis HOM05D002144 ORTHO05D002170 1.5e-17 93.2 129 55.8
PGR119G1483 Punica granatum HOM05D002144 ORTHO05D002170 1.5e-17 93.2 136 44.9
Cc04_g00930 Coffea canephora HOM05D002144 ORTHO05D002170 5.7e-17 91.3 144 52.8
TWI23G1155 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 7.4e-17 90.9 136 41.2
PGR102G1253 Punica granatum HOM05D002144 ORTHO05D002170 9.7e-17 90.5 125 44.8
Ciclev10026754m.g Citrus clementina HOM05D002144 ORTHO05D002170 2.2e-16 89.4 137 49.6
Hma1.2p1_0229F.1_g096900 Hydrangea macrophylla HOM05D002144 ORTHO05D002170 2.2e-16 89.4 132 50.0
Dinv20398 Davidia involucrata HOM05D002144 ORTHO05D002170 2.8e-16 89.0 125 43.2
FAN14G0119 Fragaria x ananassa HOM05D002144 ORTHO05D002170 3.7e-16 88.6 122 43.4
TWI14G1240 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 3.7e-16 88.6 135 49.6
HanXRQChr04g0094481 Helianthus annuus HOM05D002144 ORTHO05D002170 8.2e-16 87.4 128 51.6
Sc15g0000660 Simmondsia chinensis HOM05D002144 ORTHO05D002170 1.8e-15 86.3 133 54.1
Lj3g0016932 Lotus japonicus HOM05D002144 ORTHO05D002170 2.4e-15 85.9 127 53.5
FAN02G3229 Fragaria x ananassa HOM05D002144 ORTHO05D002170 4.1e-15 85.1 122 49.2
Lsat_1_v5_gn_4_91600 Lactuca sativa HOM05D002144 ORTHO05D002170 4.1e-15 85.1 132 46.2
Oeu059028.1 Olea europaea HOM05D002144 ORTHO05D002170 4.1e-15 85.1 140 44.3
COL.COLO4_30825 Corchorus olitorius HOM05D002144 ORTHO05D002170 5.3e-15 84.7 122 50.0
Gorai.009G144700 Gossypium raimondii HOM05D002144 ORTHO05D002170 6.9e-15 84.3 125 42.4
Ca_04812_v3 Cicer arietinum L. HOM05D002144 ORTHO05D002170 1.2e-14 83.6 126 46.0
Oeu008518.1 Olea europaea HOM05D002144 ORTHO05D002170 2.6e-14 82.4 140 42.1
DCAR_016099 Daucus carota HOM05D002144 ORTHO05D002170 4.5e-14 81.6 119 54.6
VMungo0331G1113 Vigna mungo HOM05D002144 ORTHO05D002170 4.5e-14 81.6 125 50.4
MSTRG.9537 Avicennia marina HOM05D002144 ORTHO05D002170 7.7e-14 80.9 139 50.4
SGA_v2.0_scaffold4G02090 Striga asiatica HOM05D002144 ORTHO05D002170 7.7e-14 80.9 129 51.9
QL05p002979 Quercus lobata HOM05D002144 ORTHO05D002170 1.7e-13 79.7 131 48.9
Rhsim08G0242200 Rhododendron simsii HOM05D002144 ORTHO05D002170 2.9e-13 79.0 130 47.7
Atru.chr1.4136 Acer truncatum HOM05D002144 ORTHO05D002170 8.5e-13 77.4 122 50.0
FAN05G3077 Fragaria x ananassa HOM05D002144 ORTHO05D002170 1.1e-12 77.0 138 44.9
Hund05715 Selenicereus undatus HOM05D002144 ORTHO05D002170 3.2e-12 75.5 153 40.5
Actinidia21816 Actinidia chinensis HOM05D002144 ORTHO05D002170 7.2e-12 74.3 125 45.6
MSTRG.9534 Avicennia marina HOM05D002144 ORTHO05D002170 9.4e-12 73.9 138 41.3
Prupe.3G035700 Prunus persica HOM05D002144 ORTHO05D002170 1.6e-11 73.2 112 50.9
Medtr8g022300 Medicago truncatula HOM05D002144 ORTHO05D002170 3.6e-11 72.0 132 49.2
Migut.D00918 Erythranthe guttata HOM05D002144 ORTHO05D002170 4.7e-11 71.6 128 52.3
Peaxi162Scf00207g01541 Petunia axillaris HOM05D002144 ORTHO05D002170 4.7e-11 71.6 142 49.3
Gohir.D05G140350 Gossypium hirsutum HOM05D002144 ORTHO05D002170 6.1e-11 71.2 114 41.2
EL10Ac7g16456 Beta vulgaris HOM05D002144 ORTHO05D002170 1.4e-10 70.1 142 35.9
Zm00001eb040560 Zea mays HOM05D002144 ORTHO05D002170 3.0e-10 68.9 137 36.5
vmacro15066 Vaccinium macrocarpon HOM05D002144 ORTHO05D002170 3.9e-10 68.6 121 47.1
Sabra01G0128200 Salix brachista HOM05D002144 ORTHO05D002170 6.7e-10 67.8 137 44.5
Potri.003G070500 Populus trichocarpa HOM05D002144 ORTHO05D002170 8.8e-10 67.4 121 48.8
Ah.08g217150 Amaranthus hybridus HOM05D002144 ORTHO05D002170 1.1e-09 67.0 129 39.5
Os09g0437500 Oryza sativa ssp. japonica HOM05D002144 ORTHO05D002170 1.1e-09 67.0 150 46.0
Solyc06g063060.3 Solanum lycopersicum HOM05D002144 ORTHO05D002170 3.3e-09 65.5 145 46.9
Sopen06g022510 Solanum pennellii HOM05D002144 ORTHO05D002170 3.3e-09 65.5 145 46.9
Eucgr.J02610 Eucalyptus grandis HOM05D002144 ORTHO05D002170 4.4e-09 65.1 136 34.6
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 4.4e-09 65.1 151 33.1
PGSC0003DMG400004897 Solanum tuberosum HOM05D002144 ORTHO05D002170 5.7e-09 64.7 147 47.6
SalBow7G2197 Salvia bowleyana HOM05D002144 ORTHO05D002170 9.7e-09 63.9 128 41.4
Manes.04G148800 Manihot esculenta HOM05D002144 ORTHO05D002170 1.7e-08 63.2 116 46.6
Thecc.06G126600 Theobroma cacao HOM05D002144 ORTHO05D002170 2.8e-08 62.4 120 46.7
ClCG09G001220 Citrullus lanatus HOM05D002144 ORTHO05D002170 3.7e-08 62.0 106 36.8
ECA232G0343 Erigeron canadensis HOM05D003140 ORTHO05D003851 4.8e-08 61.6 135 39.3
CANSAT56G1652 Cannabis sativa HOM05D002144 ORTHO05D002170 6.3e-08 61.2 153 42.5
Thhalv10011865m.g Eutrema salsugineum HOM05D002144 ORTHO05D002170 6.3e-08 61.2 129 35.7
Nitab4.5_0003137g0020 Nicotiana tabacum HOM05D002144 ORTHO05D002170 8.2e-08 60.8 146 45.2
Potri.001G164800 Populus trichocarpa HOM05D002144 ORTHO05D002170 8.2e-08 60.8 75 44.0
MSTRG.10926 Avicennia marina HOM05D002144 ORTHO05D002170 1.1e-07 60.5 141 44.0
Lalb_Chr10g0101281 Lupinus albus HOM05D002144 ORTHO05D002170 1.1e-07 60.5 54 53.7
CiPaw.02G133200 Carya illinoinensis HOM05D002144 ORTHO05D002170 1.8e-07 59.7 71 47.9
Ca_30856_v3 Cicer arietinum L. HOM05D002144 ORTHO05D002170 1.8e-07 59.7 67 44.8
arahy.Tifrunner.gnm1.ann1.MBM2VS Arachis hypogaea HOM05D002144 ORTHO05D002170 2.4e-07 59.3 71 49.3
Nitab4.5_0002716g0090 Nicotiana tabacum HOM05D002144 ORTHO05D002170 5.3e-07 58.2 147 44.9
Pp3c20_21690 Physcomitrium patens HOM05D003630 ORTHO05D004151 7.0e-07 57.8 163 31.9
MELO3C022686.2 Cucumis melo HOM05D002144 ORTHO05D002170 9.1e-07 57.4 141 42.6
Sed0018160 Sechium edule HOM05D002144 ORTHO05D002170 9.1e-07 57.4 63 50.8
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.2e-06 57.0 163 31.3
AL1G62770 Arabidopsis lyrata HOM05D002144 ORTHO05D002170 1.5e-06 56.6 130 33.1
CARHR044400 Cardamine hirsuta HOM05D002144 ORTHO05D002170 1.5e-06 56.6 129 33.3
Manes.11G015300 Manihot esculenta HOM05D002144 ORTHO05D002170 1.5e-06 56.6 74 45.9
Pp3c23_13750 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.5e-06 56.6 171 36.3
Psat4g166680 Pisum sativum HOM05D002144 ORTHO05D002170 1.5e-06 56.6 58 48.3
Glyma.07G043000 Glycine max HOM05D002144 ORTHO05D002170 2.6e-06 55.8 113 52.2
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 2.6e-06 55.8 116 31.0
Haze_16090 Corylus avellana HOM05D002144 ORTHO05D002170 3.4e-06 55.5 53 52.8
BcaB07g33437 Brassica carinata HOM05D002144 ORTHO05D002170 4.5e-06 55.1 130 32.3
Carub.0001s4330 Capsella rubella HOM05D002144 ORTHO05D002170 4.5e-06 55.1 133 33.1
CDE06G1752 Ceratophyllum demersum HOM05D002144 ORTHO05D002170 5.9e-06 54.7 75 45.3
MELO3C024325.2 Cucumis melo HOM05D002144 ORTHO05D002170 5.9e-06 54.7 51 52.9
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 5.9e-06 54.7 117 40.2
CsaV3_7G034150 Cucumis sativus L. HOM05D002144 ORTHO05D002170 7.7e-06 54.3 51 54.9


User provided reference genes

Program Settings