Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO386G0143 Papaver somniferum HOM05D002144 ORTHO05D002170 4.9e-88 327.8 166 100.0
PSO223G0021 Papaver somniferum HOM05D002144 ORTHO05D002170 4.0e-58 228.4 123 95.1
PSO223G0023 Papaver somniferum HOM05D002144 ORTHO05D002170 2.9e-40 169.1 124 76.6
PSO386G0162 Papaver somniferum HOM05D002144 ORTHO05D002170 1.2e-38 163.7 124 75.0
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 3.1e-26 122.5 128 57.8
ATR0681G069 Amborella trichopoda HOM05D002144 ORTHO05D002170 9.3e-23 110.9 129 57.4
Dinv37840 Davidia involucrata HOM05D002144 ORTHO05D002170 1.6e-22 110.2 131 55.0
Duzib235G0612 Durio zibethinus HOM05D002144 ORTHO05D002170 1.3e-21 107.1 131 50.4
Gohir.A05G138200 Gossypium hirsutum HOM05D002144 ORTHO05D002170 2.3e-21 106.3 130 49.2
FvH4_6g35330 Fragaria vesca HOM05D002144 ORTHO05D002170 3.0e-21 105.9 130 47.7
FAN09G1588 Fragaria x ananassa HOM05D002144 ORTHO05D002170 3.0e-21 105.9 130 47.7
Nn8g38544 Nelumbo nucifera HOM05D002144 ORTHO05D002170 3.9e-21 105.5 165 47.9
GSVIVG01016701001 Vitis vinifera HOM05D002144 ORTHO05D002170 2.2e-19 99.8 129 51.2
Aqoxy7G00990 Aquilegia oxysepala HOM05D002144 ORTHO05D002170 4.8e-19 98.6 128 50.8
Duzib192G0893 Durio zibethinus HOM05D002144 ORTHO05D002170 1.1e-18 97.4 130 48.5
Gorai.009G144700 Gossypium raimondii HOM05D002144 ORTHO05D002170 1.4e-18 97.1 125 47.2
FAN14G0119 Fragaria x ananassa HOM05D002144 ORTHO05D002170 1.2e-17 94.0 122 45.1
MD09G1176600 Malus domestica HOM05D002144 ORTHO05D002170 1.5e-17 93.6 128 47.7
Actinidia24441 Actinidia chinensis HOM05D002144 ORTHO05D002170 3.4e-17 92.4 136 46.3
MD17G1150200 Malus domestica HOM05D002144 ORTHO05D002170 5.9e-17 91.7 128 46.9
RcHm_v2.0_Chr2g0146781 Rosa chinensis HOM05D002144 ORTHO05D002170 1.0e-16 90.9 129 42.6
TWI23G1155 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 8.5e-16 87.8 138 44.9
Dinv20398 Davidia involucrata HOM05D002144 ORTHO05D002170 1.1e-15 87.4 125 48.0
PGR119G1483 Punica granatum HOM05D002144 ORTHO05D002170 1.4e-15 87.0 136 42.6
Hma1.2p1_0229F.1_g096900 Hydrangea macrophylla HOM05D002144 ORTHO05D002170 2.5e-15 86.3 132 46.2
Gohir.D05G140350 Gossypium hirsutum HOM05D002144 ORTHO05D002170 9.4e-15 84.3 119 44.5
PGR102G1253 Punica granatum HOM05D002144 ORTHO05D002170 1.2e-14 84.0 123 43.1
COL.COLO4_30825 Corchorus olitorius HOM05D002144 ORTHO05D002170 2.1e-14 83.2 124 45.2
Ciclev10026754m.g Citrus clementina HOM05D002144 ORTHO05D002170 3.6e-14 82.4 138 44.2
Oeu008518.1 Olea europaea HOM05D002144 ORTHO05D002170 1.8e-13 80.1 143 40.6
TWI14G1240 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 1.8e-13 80.1 138 42.0
FAN02G3229 Fragaria x ananassa HOM05D002144 ORTHO05D002170 8.8e-13 77.8 121 38.8
Oeu059028.1 Olea europaea HOM05D002144 ORTHO05D002170 8.8e-13 77.8 143 39.2
Zm00001eb040560 Zea mays HOM05D002144 ORTHO05D002170 1.5e-12 77.0 138 42.0
CiPaw.01G214500 Carya illinoinensis HOM05D002144 ORTHO05D002170 2.0e-12 76.6 129 43.4
Cc04_g00930 Coffea canephora HOM05D002144 ORTHO05D002170 2.5e-12 76.3 144 39.6
FAN05G3077 Fragaria x ananassa HOM05D002144 ORTHO05D002170 1.3e-11 73.9 137 37.2
Ca_04812_v3 Cicer arietinum L. HOM05D002144 ORTHO05D002170 1.7e-11 73.6 126 38.9
MBI13_g01666_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 1.7e-11 73.6 125 43.2
Rhsim08G0242200 Rhododendron simsii HOM05D002144 ORTHO05D002170 1.7e-11 73.6 131 40.5
Actinidia21816 Actinidia chinensis HOM05D002144 ORTHO05D002170 2.2e-11 73.2 126 42.9
EL10Ac7g16456 Beta vulgaris HOM05D002144 ORTHO05D002170 8.2e-11 71.2 139 36.0
Eucgr.J02610 Eucalyptus grandis HOM05D002144 ORTHO05D002170 8.2e-11 71.2 135 36.3
QL05p002979 Quercus lobata HOM05D002144 ORTHO05D002170 1.1e-10 70.9 131 38.9
Lsat_1_v5_gn_4_91600 Lactuca sativa HOM05D002144 ORTHO05D002170 1.4e-10 70.5 132 37.1
Atru.chr1.4136 Acer truncatum HOM05D002144 ORTHO05D002170 1.8e-10 70.1 121 41.3
Lj3g0016932 Lotus japonicus HOM05D002144 ORTHO05D002170 1.8e-10 70.1 131 42.0
HanXRQChr04g0094481 Helianthus annuus HOM05D002144 ORTHO05D002170 3.1e-10 69.3 128 40.6
MSTRG.9534 Avicennia marina HOM05D002144 ORTHO05D002170 6.9e-10 68.2 140 36.4
DCAR_016099 Daucus carota HOM05D002144 ORTHO05D002170 9.1e-10 67.8 120 43.3
SalBow7G2197 Salvia bowleyana HOM05D002144 ORTHO05D002170 9.1e-10 67.8 128 37.5
Hund05715 Selenicereus undatus HOM05D002144 ORTHO05D002170 1.5e-09 67.0 154 36.4
VMungo0331G1113 Vigna mungo HOM05D002144 ORTHO05D002170 2.0e-09 66.6 135 37.0
MSTRG.9537 Avicennia marina HOM05D002144 ORTHO05D002170 2.6e-09 66.2 139 36.7
Sc15g0000660 Simmondsia chinensis HOM05D002144 ORTHO05D002170 2.6e-09 66.2 130 38.5
CARHR044400 Cardamine hirsuta HOM05D002144 ORTHO05D002170 3.4e-09 65.9 131 39.7
Medtr8g022300 Medicago truncatula HOM05D002144 ORTHO05D002170 4.5e-09 65.5 131 35.1
Prupe.3G035700 Prunus persica HOM05D002144 ORTHO05D002170 4.5e-09 65.5 113 45.1
Carub.0001s4330 Capsella rubella HOM05D002144 ORTHO05D002170 7.7e-09 64.7 133 39.8
Thhalv10011865m.g Eutrema salsugineum HOM05D002144 ORTHO05D002170 7.7e-09 64.7 131 40.5
Thecc.06G126600 Theobroma cacao HOM05D002144 ORTHO05D002170 7.7e-09 64.7 116 42.2
SGA_v2.0_scaffold4G02090 Striga asiatica HOM05D002144 ORTHO05D002170 1.0e-08 64.3 129 38.0
BcaB07g33437 Brassica carinata HOM05D002144 ORTHO05D002170 1.3e-08 63.9 132 38.6
Sabra01G0128200 Salix brachista HOM05D002144 ORTHO05D002170 1.3e-08 63.9 136 38.2
Haze_04128 Corylus avellana HOM05D002144 ORTHO05D002170 3.8e-08 62.4 135 39.3
Migut.D00918 Erythranthe guttata HOM05D002144 ORTHO05D002170 3.8e-08 62.4 128 39.8
Glyma.10G151000 Glycine max HOM05D002144 ORTHO05D002170 3.8e-08 62.4 128 40.6
MBI18_g06040_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 5.0e-08 62.0 128 38.3
vmacro15066 Vaccinium macrocarpon HOM05D002144 ORTHO05D002170 5.0e-08 62.0 126 41.3
AL1G62770 Arabidopsis lyrata HOM05D002144 ORTHO05D002170 6.5e-08 61.6 131 38.9
Manes.04G148800 Manihot esculenta HOM05D002144 ORTHO05D002170 8.5e-08 61.2 116 38.8
Haze_16090 Corylus avellana HOM05D002144 ORTHO05D002170 1.1e-07 60.8 83 45.8
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 1.4e-07 60.5 154 36.4
Os09g0437500 Oryza sativa ssp. japonica HOM05D002144 ORTHO05D002170 1.4e-07 60.5 151 34.4
Phvul.007G197700 Phaseolus vulgaris HOM05D002144 ORTHO05D002170 1.4e-07 60.5 121 39.7
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.4e-07 60.5 161 37.3
Ah.08g217150 Amaranthus hybridus HOM05D002144 ORTHO05D002170 2.5e-07 59.7 126 35.7
Cfa006639 Carpinus fangiana HOM05D002144 ORTHO05D002170 2.5e-07 59.7 124 39.5
Glyma.20G237200 Glycine max HOM05D002144 ORTHO05D002170 3.2e-07 59.3 121 42.1
Sed0007798 Sechium edule HOM05D002144 ORTHO05D002170 3.2e-07 59.3 122 42.6
Hund07106 Selenicereus undatus HOM05D002144 ORTHO05D002170 3.2e-07 59.3 126 36.5
TPR.G33200 Trifolium pratense HOM05D002144 ORTHO05D002170 3.2e-07 59.3 161 37.9
BcaB02g10863 Brassica carinata HOM05D002144 ORTHO05D002170 4.2e-07 58.9 127 35.4
Cpa.g.sc25.165 Carica papaya HOM05D002144 ORTHO05D002170 4.2e-07 58.9 87 44.8
PGR031G3340 Punica granatum HOM05D002144 ORTHO05D002170 4.2e-07 58.9 116 40.5
TAR365G0709 Trochodendron aralioides HOM05D002144 ORTHO05D002170 4.2e-07 58.9 131 38.2
Lj1g0021138 Lotus japonicus HOM05D002144 ORTHO05D002170 5.5e-07 58.5 128 37.5
Sc16g0008780 Simmondsia chinensis HOM05D002144 ORTHO05D002170 5.5e-07 58.5 113 40.7
AT1G54070 Arabidopsis thaliana HOM05D002144 ORTHO05D002170 7.2e-07 58.2 132 34.8
Gohir.D09G075100 Gossypium hirsutum HOM05D002144 ORTHO05D002170 7.2e-07 58.2 119 39.5
Sp3g12440 Schrenkiella parvula HOM05D002144 ORTHO05D002170 7.2e-07 58.2 123 35.8
TPR.G17717 Trifolium pratense HOM05D002144 ORTHO05D002170 7.2e-07 58.2 126 36.5
DCAR_003365 Daucus carota HOM05D002144 ORTHO05D002170 9.4e-07 57.8 99 40.4
Gohir.A09G075400 Gossypium hirsutum HOM05D002144 ORTHO05D002170 9.4e-07 57.8 118 39.8
Gorai.006G090200 Gossypium raimondii HOM05D002144 ORTHO05D002170 9.4e-07 57.8 118 39.8
VMungo0720G1086 Vigna mungo HOM05D002144 ORTHO05D002170 9.4e-07 57.8 128 36.7
CDE06G1752 Ceratophyllum demersum HOM05D002144 ORTHO05D002170 2.1e-06 56.6 87 44.8
HanXRQChr11g0320831 Helianthus annuus HOM05D002144 ORTHO05D002170 2.7e-06 56.2 118 36.4
Solyc01g099840.3 Solanum lycopersicum HOM05D002144 ORTHO05D002170 2.7e-06 56.2 130 36.9
Sopen00g009360 Solanum pennellii HOM05D002144 ORTHO05D002170 2.7e-06 56.2 130 36.9
Sopen01g043350 Solanum pennellii HOM05D002144 ORTHO05D002170 2.7e-06 56.2 130 36.9
Duzib106G0149 Durio zibethinus HOM05D002144 ORTHO05D002170 3.6e-06 55.8 130 39.2
Manes.08G116600 Manihot esculenta HOM05D002144 ORTHO05D002170 3.6e-06 55.8 130 38.5
Potri.001G164800 Populus trichocarpa HOM05D002144 ORTHO05D002170 3.6e-06 55.8 81 43.2
COL.COLO4_10536 Corchorus olitorius HOM05D002144 ORTHO05D002170 4.7e-06 55.5 131 38.9
Gorai.007G300900 Gossypium raimondii HOM05D002144 ORTHO05D002170 4.7e-06 55.5 130 39.2
Peaxi162Scf00207g01541 Petunia axillaris HOM05D002144 ORTHO05D002170 4.7e-06 55.5 141 36.2
ClCG09G001220 Citrullus lanatus HOM05D002144 ORTHO05D002170 6.1e-06 55.1 107 38.3
Lsat_1_v5_gn_1_37700 Lactuca sativa HOM05D002144 ORTHO05D002170 6.1e-06 55.1 89 43.8
Thecc.05G314100 Theobroma cacao HOM05D002144 ORTHO05D002170 6.1e-06 55.1 130 39.2
TWI56G1061 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 6.1e-06 55.1 112 39.3
unitig_748.g8062 Utricularia gibba HOM05D002144 ORTHO05D002170 6.1e-06 55.1 127 35.4
ECA236G2863 Erigeron canadensis HOM05D004840 ORTHO05D005751 7.9e-06 54.7 113 37.2


User provided reference genes

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