Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 1.1e-184 649.8 339 100.0
PSO724G0807 Papaver somniferum HOM05D005557 ORTHO05D006748 4.3e-107 392.1 269 79.9
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 5.8e-96 355.1 250 70.4
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 1.9e-94 350.1 337 58.8
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 8.7e-92 341.3 220 74.5
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 4.3e-91 339.0 214 75.7
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 7.3e-91 338.2 237 70.0
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 9.6e-91 337.8 220 73.2
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 1.3e-90 337.4 239 70.7
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 1.3e-90 337.4 249 67.9
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 1.6e-90 337.0 224 71.4
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 2.1e-90 336.7 220 74.5
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 2.8e-90 336.3 222 73.0
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 3.6e-90 335.9 330 56.4
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 3.6e-90 335.9 219 73.5
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 3.6e-90 335.9 219 73.5
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 4.8e-90 335.5 225 70.7
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 6.2e-90 335.1 336 56.0
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 6.2e-90 335.1 335 54.0
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 1.1e-89 334.3 225 69.8
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 2.4e-89 333.2 233 70.0
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 2.4e-89 333.2 220 73.2
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 4.0e-89 332.4 232 68.5
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 6.9e-89 331.6 217 73.3
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 9.0e-89 331.3 218 72.0
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 4.5e-88 328.9 341 56.6
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 4.5e-88 328.9 237 68.8
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 4.5e-88 328.9 334 55.1
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 9.9e-88 327.8 277 62.1
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 9.9e-88 327.8 335 53.7
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 1.3e-87 327.4 228 69.3
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 1.7e-87 327.0 332 54.5
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 1.7e-87 327.0 227 70.9
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 2.2e-87 326.6 250 65.2
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 2.9e-87 326.2 219 69.4
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 2.9e-87 326.2 345 53.0
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 4.9e-87 325.5 345 53.6
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 1.1e-86 324.3 234 68.8
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 1.4e-86 323.9 231 68.4
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 2.4e-86 323.2 209 73.2
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 3.2e-86 322.8 338 54.7
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 4.2e-86 322.4 295 58.3
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 7.1e-86 321.6 249 65.1
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 9.3e-86 321.2 222 68.5
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 1.2e-85 320.9 209 72.7
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 1.2e-85 320.9 257 63.0
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 2.1e-85 320.1 343 53.6
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 2.7e-85 319.7 341 53.1
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 2.7e-85 319.7 278 59.4
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 6.0e-85 318.5 208 74.5
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 6.0e-85 318.5 235 65.5
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 6.0e-85 318.5 321 53.9
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 7.9e-85 318.2 223 68.6
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 3.9e-84 315.8 227 64.8
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 6.7e-84 315.1 332 53.3
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 6.7e-84 315.1 213 68.1
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 6.7e-84 315.1 226 68.6
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 1.1e-83 314.3 229 67.2
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 1.1e-83 314.3 234 65.4
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.1e-83 314.3 222 70.3
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 1.1e-83 314.3 213 67.6
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 1.9e-83 313.5 217 67.3
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 2.5e-83 313.2 219 68.9
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 3.3e-83 312.8 227 65.2
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 3.3e-83 312.8 212 67.9
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 5.6e-83 312.0 343 51.9
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 7.4e-83 311.6 339 53.1
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 7.4e-83 311.6 330 50.9
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 1.6e-82 310.5 226 65.9
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 2.1e-82 310.1 340 52.6
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 6.2e-82 308.5 346 50.9
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 6.2e-82 308.5 239 62.8
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 6.2e-82 308.5 239 62.8
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 8.1e-82 308.1 282 56.0
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 8.1e-82 308.1 225 64.4
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 1.8e-81 307.0 340 49.1
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 1.8e-81 307.0 248 62.1
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 2.4e-81 306.6 332 50.0
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 3.1e-81 306.2 275 56.4
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 5.3e-81 305.4 289 55.0
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 5.3e-81 305.4 228 63.6
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 5.3e-81 305.4 242 62.4
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 5.3e-81 305.4 210 69.0
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 6.9e-81 305.1 332 53.0
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 6.9e-81 305.1 233 61.8
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 1.5e-80 303.9 221 66.1
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 2.0e-80 303.5 289 56.1
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 3.4e-80 302.8 232 62.5
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 1.3e-79 300.8 237 65.0
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 1.7e-79 300.4 211 67.8
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 2.2e-79 300.1 248 57.7
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 2.9e-79 299.7 229 64.2
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 3.8e-79 299.3 218 63.3
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 8.4e-79 298.1 289 55.7
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 1.1e-78 297.7 246 58.9
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 1.1e-78 297.7 214 64.5
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 1.1e-78 297.7 330 49.1
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 1.9e-78 297.0 214 64.5
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 4.2e-78 295.8 318 52.8
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 5.5e-78 295.4 232 63.4
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 5.5e-78 295.4 316 53.5
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 7.1e-78 295.0 246 58.1
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 7.1e-78 295.0 214 65.9
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 1.2e-77 294.3 245 60.8
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 6.0e-77 292.0 312 55.8
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 7.9e-77 291.6 211 66.4
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 3.9e-76 289.3 330 50.3
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 5.3e-73 278.9 232 63.4
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 1.2e-72 277.7 233 59.2
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 3.4e-72 276.2 310 51.0
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 2.7e-69 266.5 281 52.7
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 1.1e-67 261.2 215 56.7
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 1.6e-66 257.3 220 57.7
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 2.2e-63 246.9 289 47.1
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 1.1e-62 244.6 234 52.6
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 1.4e-60 237.7 182 67.0
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.4e-60 237.7 202 60.4
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 3.0e-60 236.5 167 65.9
Thecc.09G074000 Theobroma cacao HOM05D005557 ORTHO05D006748 1.5e-59 234.2 243 51.9
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 8.2e-50 201.8 265 45.7
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 7.2e-46 188.7 188 51.1
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 1.5e-38 164.5 144 55.6
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 3.2e-38 163.3 109 70.6
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 7.2e-38 162.2 279 39.8
arahy.Tifrunner.gnm1.ann1.D619LQ Arachis hypogaea HOM05D005557 ORTHO05D006748 2.2e-31 140.6 113 61.1
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 2.9e-31 140.2 207 38.6
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea HOM05D005557 ORTHO05D006748 2.1e-29 134.0 83 69.9
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea HOM05D005557 ORTHO05D006748 2.7e-29 133.7 83 71.1
AagrBONN_evm.TU.Sc2ySwM_228.4614 Anthoceros agrestis HOM05D005557 ORTHO05D006748 6.1e-29 132.5 125 55.2
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea HOM05D005557 ORTHO05D006748 2.4e-25 120.6 117 53.0
Cre06.g269550 Chlamydomonas reinhardtii HOM05D005557 ORTHO05D006748 4.1e-25 119.8 142 41.5
MCO02G393 Micromonas commoda HOM05D005557 ORTHO05D006748 1.7e-23 114.4 199 32.2
arahy.Tifrunner.gnm1.ann1.67TMSF Arachis hypogaea HOM05D005557 ORTHO05D006748 2.3e-23 114.0 68 73.5
Nn1g06537 Nelumbo nucifera HOM05D005557 ORTHO05D006748 5.0e-15 86.3 84 57.1
arahy.Tifrunner.gnm1.ann1.L7J4LP Arachis hypogaea HOM05D005557 ORTHO05D006748 7.3e-14 82.4 110 41.8
Migut.J00920 Erythranthe guttata HOM05D005557 ORTHO05D006748 1.6e-13 81.3 91 53.8
MBI13_g00695_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 3.2e-09 67.0 88 44.3
arahy.Tifrunner.gnm1.ann1.HVCV5S Arachis hypogaea HOM05D004618 ORTHO05D005318 9.2e-09 65.5 124 33.1
Migut.J00958 Erythranthe guttata HOM05D005557 ORTHO05D006748 1.2e-08 65.1 86 48.8
Lj2g0003057 Lotus japonicus HOM05D005557 ORTHO05D018814 5.0e-07 59.7 69 49.3
C09p50170 Brassica napus HOM05D002376 ORTHO05D004654 4.3e-06 56.6 37 67.6


User provided reference genes

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