Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO386G0085 Papaver somniferum HOM05D003860 ORTHO05D004218 1.2e-144 516.5 263 100.0
PSO724G0039 Papaver somniferum HOM05D003860 ORTHO05D004218 1.0e-95 354.0 239 80.8
PSO724G0870 Papaver somniferum HOM05D003860 ORTHO05D004218 4.4e-83 312.0 231 72.7
PSO386G0262 Papaver somniferum HOM05D003860 ORTHO05D004218 1.1e-81 307.4 221 74.7
PSO210G3069 Papaver somniferum HOM05D003860 ORTHO05D004218 6.0e-48 195.3 237 50.6
PSO724G0326 Papaver somniferum HOM05D003860 ORTHO05D004218 4.7e-37 159.1 243 43.2
PSO063G5549 Papaver somniferum HOM05D003860 ORTHO05D004218 1.4e-33 147.5 318 36.8
PSO832G4205 Papaver somniferum HOM05D003860 ORTHO05D004218 4.1e-33 146.0 188 47.3
PSO386G0027 Papaver somniferum HOM05D003860 ORTHO05D004218 8.7e-31 138.3 220 43.2
PSO170G3926 Papaver somniferum HOM05D003860 ORTHO05D004218 1.6e-29 134.0 285 37.2
TAR365G0731 Trochodendron aralioides HOM05D003860 ORTHO05D004218 1.2e-24 117.9 244 38.1
Prupe.1G033500 Prunus persica HOM05D003860 ORTHO05D004218 7.8e-24 115.2 238 34.9
PSO675G5794 Papaver somniferum HOM05D003860 ORTHO05D004218 3.9e-23 112.8 137 50.4
MD16G1211400 Malus domestica HOM05D003860 ORTHO05D004218 6.6e-23 112.1 242 34.3
Nn1g02668 Nelumbo nucifera HOM05D003860 ORTHO05D004218 1.3e-21 107.8 279 32.6
Lj3C795G8 Lonicera japonica HOM05D003860 ORTHO05D004218 3.6e-21 106.3 235 34.5
Actinidia05456 Actinidia chinensis HOM05D003860 ORTHO05D004218 4.8e-21 105.9 238 34.9
Aqoxy2G03595 Aquilegia oxysepala HOM05D003860 ORTHO05D004218 2.4e-20 103.6 239 36.4
CSS0040755 Camellia sinensis var. sinensis HOM05D003860 ORTHO05D004218 4.0e-20 102.8 265 34.0
RcHm_v2.0_Chr5g0051721 Rosa chinensis HOM05D003860 ORTHO05D004218 4.0e-20 102.8 238 35.3
Hund04555 Selenicereus undatus HOM05D003860 ORTHO05D004218 7.6e-19 98.6 255 37.6
arahy.Tifrunner.gnm1.ann1.5VC0H5 Arachis hypogaea HOM05D003860 ORTHO05D004218 2.2e-18 97.1 222 31.5
FAN25G1720 Fragaria x ananassa HOM05D003860 ORTHO05D004218 2.2e-18 97.1 266 34.2
Rhsim02G0034600 Rhododendron simsii HOM05D003860 ORTHO05D004218 2.2e-18 97.1 250 33.2
Potri.008G163500 Populus trichocarpa HOM05D003860 ORTHO05D004218 4.9e-18 95.9 239 35.1
CiPaw.02G115700 Carya illinoinensis HOM05D003860 ORTHO05D004218 1.1e-17 94.7 242 33.1
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 1.1e-17 94.7 236 32.6
FvH4_3g28990 Fragaria vesca HOM05D003860 ORTHO05D004218 9.3e-17 91.7 234 30.3
Solyc03g005440.3 Solanum lycopersicum HOM05D003860 ORTHO05D004218 1.2e-16 91.3 244 32.8
PGSC0003DMG400013397 Solanum tuberosum HOM05D003860 ORTHO05D004218 1.6e-16 90.9 250 31.6
FAN11G1859 Fragaria x ananassa HOM05D003860 ORTHO05D004218 2.1e-16 90.5 233 30.5
MBI01_g26745_MAGBIO Magnolia biondii HOM05D003860 ORTHO05D004218 6.0e-16 89.0 238 34.5
Atru.chr4.2181 Acer truncatum HOM05D003860 ORTHO05D004218 1.0e-15 88.2 232 31.9
ATR0665G258 Amborella trichopoda HOM05D003860 ORTHO05D004218 1.0e-15 88.2 228 32.5
FAN21G0272 Fragaria x ananassa HOM05D003860 ORTHO05D004218 1.0e-15 88.2 239 32.6
Sopen03g001470 Solanum pennellii HOM05D003860 ORTHO05D004218 1.0e-15 88.2 244 32.8
arahy.Tifrunner.gnm1.ann1.IPZV7K Arachis hypogaea HOM05D003860 ORTHO05D004218 1.3e-15 87.8 241 29.5
CAN.G638.70 Capsicum annuum HOM05D003860 ORTHO05D004218 5.1e-15 85.9 240 31.7
Rhsim04G0189100 Rhododendron simsii HOM05D003860 ORTHO05D004218 5.1e-15 85.9 240 31.7
Thecc.04G247900 Theobroma cacao HOM05D003860 ORTHO05D004218 5.1e-15 85.9 238 30.3
Phvul.002G055200 Phaseolus vulgaris HOM05D003860 ORTHO05D004218 6.7e-15 85.5 226 32.3
Nitab4.5_0003331g0100 Nicotiana tabacum HOM05D003860 ORTHO05D004218 1.5e-14 84.3 253 29.2
Sc19g0003450 Simmondsia chinensis HOM05D003860 ORTHO05D004218 2.5e-14 83.6 234 32.1
AUR62015467 Chenopodium quinoa HOM05D003860 ORTHO05D004218 3.3e-14 83.2 246 33.3
Nitab4.5_0000436g0080 Nicotiana tabacum HOM05D003860 ORTHO05D004218 3.3e-14 83.2 244 29.9
Lj3g0013538 Lotus japonicus HOM05D003860 ORTHO05D004218 1.3e-13 81.3 235 29.8
EL10Ac3g05899 Beta vulgaris HOM05D003860 ORTHO05D004218 2.1e-13 80.5 246 32.9
Psat7g227280 Pisum sativum HOM05D003860 ORTHO05D004218 2.1e-13 80.5 256 30.9
AUR62002255 Chenopodium quinoa HOM05D003860 ORTHO05D004218 4.8e-13 79.3 245 32.2
ClCG06G006760 Citrullus lanatus HOM05D003860 ORTHO05D004218 3.1e-12 76.6 226 30.5
VMungo0251G0597 Vigna mungo HOM05D003860 ORTHO05D004218 4.0e-12 76.3 209 34.4
Sed0002683 Sechium edule HOM05D003860 ORTHO05D004218 5.3e-12 75.9 220 28.6
Glyma.12G000500 Glycine max HOM05D003860 ORTHO05D004218 9.0e-12 75.1 240 30.8
Medtr4g032190 Medicago truncatula HOM05D003860 ORTHO05D004218 1.2e-11 74.7 230 30.4
TWI09G0161 Tripterygium wilfordii HOM05D003860 ORTHO05D004218 1.5e-11 74.3 246 30.5
Manes.03G168100 Manihot esculenta HOM05D003860 ORTHO05D004218 2.0e-11 73.9 209 32.1
TPR.G34114 Trifolium pratense HOM05D003860 ORTHO05D004218 3.4e-11 73.2 261 29.5
Peaxi162Scf00204g00115 Petunia axillaris HOM05D003860 ORTHO05D004218 9.9e-11 71.6 230 30.9
Peaxi162Scf00019g03122 Petunia axillaris HOM05D003860 ORTHO05D004218 1.7e-10 70.9 239 28.9
Cc03_g05000 Coffea canephora HOM05D003860 ORTHO05D004218 2.9e-10 70.1 240 29.6
Dinv29898 Davidia involucrata HOM05D003860 ORTHO05D004218 4.9e-10 69.3 191 29.8
Gohir.A05G398000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 4.9e-10 69.3 236 30.9
Gorai.012G021000 Gossypium raimondii HOM05D003860 ORTHO05D004218 4.9e-10 69.3 245 29.8
MSTRG.9921 Avicennia marina HOM05D003860 ORTHO05D004218 8.4e-10 68.6 243 28.0
RcHm_v2.0_Chr4g0391121 Rosa chinensis HOM05D003860 ORTHO05D004218 8.4e-10 68.6 288 24.3
Ah.07g207450 Amaranthus hybridus HOM05D003860 ORTHO05D004218 1.1e-09 68.2 229 29.7
MELO3C026783.2 Cucumis melo HOM05D003860 ORTHO05D004218 1.1e-09 68.2 225 30.2
Hund11859 Selenicereus undatus HOM05D003860 ORTHO05D004218 1.1e-09 68.2 215 30.2
Nitab4.5_0009720g0020 Nicotiana tabacum HOM05D003860 ORTHO05D004218 1.4e-09 67.8 245 28.2
DCAR_027287 Daucus carota HOM05D003860 ORTHO05D004218 2.4e-09 67.0 242 29.3
Gohir.D04G018000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 2.4e-09 67.0 245 29.4
Oeu008802.1 Olea europaea HOM05D003860 ORTHO05D004218 5.5e-09 65.9 256 29.7
SGA_v2.0_scaffold101G29803 Striga asiatica HOM05D003860 ORTHO05D004218 5.5e-09 65.9 218 28.4
Lalb_Chr03g0043921 Lupinus albus HOM05D003860 ORTHO05D004218 7.1e-09 65.5 226 27.4
RcHm_v2.0_Chr7g0211841 Rosa chinensis HOM05D003860 ORTHO05D004218 9.3e-09 65.1 278 25.9
Peaxi162Scf01247g00111 Petunia axillaris HOM05D003860 ORTHO05D004218 2.7e-08 63.5 233 28.3
Haze_11316 Corylus avellana HOM05D003860 ORTHO05D004218 7.9e-08 62.0 60 50.0
Haze_11318 Corylus avellana HOM05D003860 ORTHO05D004218 7.9e-08 62.0 60 50.0
COL.COLO4_20681 Corchorus olitorius HOM05D003860 ORTHO05D004218 1.0e-07 61.6 227 27.8
PGSC0003DMG400017259 Solanum tuberosum HOM05D003860 ORTHO05D004218 1.0e-07 61.6 220 29.5
SalBow2G1275 Salvia bowleyana HOM05D003860 ORTHO05D004218 1.3e-07 61.2 234 29.5
PSO026G0003 Papaver somniferum HOM05D020174 ORTHO05D004218 1.8e-07 60.8 40 70.0
PSO541G0200 Papaver somniferum HOM05D020174 ORTHO05D004218 1.8e-07 60.8 40 70.0
PSO541G5719 Papaver somniferum HOM05D020174 ORTHO05D004218 1.8e-07 60.8 40 70.0
vmacro08440 Vaccinium macrocarpon HOM05D003860 ORTHO05D004218 1.8e-07 60.8 222 31.5
Sabra08G0124700 Salix brachista HOM05D003860 ORTHO05D004218 3.9e-07 59.7 155 37.4
Eucgr.H03148 Eucalyptus grandis HOM05D003860 ORTHO05D004218 6.7e-07 58.9 229 29.7
PSO541G5150 Papaver somniferum HOM05D020174 ORTHO05D004218 8.7e-07 58.5 40 67.5
PGR004G1248 Punica granatum HOM05D003860 ORTHO05D004218 1.5e-06 57.8 200 27.5
Duzib114G0251 Durio zibethinus HOM05D003860 ORTHO05D004218 1.9e-06 57.4 319 28.5
CANSAT78G0297 Cannabis sativa HOM05D003860 ORTHO05D004218 2.5e-06 57.0 316 23.4
PSO541G0053 Papaver somniferum HOM05D020174 ORTHO05D004218 2.5e-06 57.0 40 65.0
Lsat_1_v5_gn_5_71460 Lactuca sativa HOM05D003860 ORTHO05D004218 4.3e-06 56.2 215 29.8
Lsat_1_v5_gn_5_72621 Lactuca sativa HOM05D003860 ORTHO05D004218 5.6e-06 55.8 232 27.2
GSVIVG01018132001 Vitis vinifera HOM05D003860 ORTHO05D004218 9.6e-06 55.1 67 43.3


User provided reference genes

Program Settings