Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G5088 Papaver somniferum HOM05D008555 ORTHO05D010760 0.0e+00 1096.3 580 100.0
PSO339G2550 Papaver somniferum HOM05D008555 ORTHO05D010760 3.6e-295 1017.7 570 95.4
TAR623G0003 Trochodendron aralioides HOM05D008555 ORTHO05D010760 4.7e-53 213.4 649 33.0
Nn2g12801 Nelumbo nucifera HOM05D008555 ORTHO05D010760 6.3e-50 203.0 655 32.1
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 7.0e-49 199.5 580 33.3
Dinv37190 Davidia involucrata HOM05D008555 ORTHO05D010760 2.7e-45 187.6 696 29.5
Cfa017405 Carpinus fangiana HOM05D008555 ORTHO05D010760 8.0e-45 186.0 573 30.9
QL07p031190 Quercus lobata HOM05D008555 ORTHO05D010760 1.5e-43 181.8 485 33.6
QL07p047905 Quercus lobata HOM05D008555 ORTHO05D010760 4.4e-43 180.3 485 33.6
GSVIVG01034198001 Vitis vinifera HOM05D008555 ORTHO05D010760 2.8e-42 177.6 636 31.4
Haze_20761 Corylus avellana HOM05D008555 ORTHO05D010760 1.4e-41 175.3 198 51.0
MBI05_g06539_MAGBIO Magnolia biondii HOM05D008555 ORTHO05D010760 1.1e-38 165.6 451 34.1
Prupe.6G252400 Prunus persica HOM05D008555 ORTHO05D010760 2.0e-35 154.8 513 31.2
MD04G1125500 Malus domestica HOM05D008555 ORTHO05D010760 4.4e-35 153.7 626 29.6
Rhsim05G0190300 Rhododendron simsii HOM05D008555 ORTHO05D010760 7.5e-35 152.9 190 46.8
CSS0010375 Camellia sinensis var. sinensis HOM05D008555 ORTHO05D010760 3.7e-34 150.6 165 50.9
Eucgr.A01250 Eucalyptus grandis HOM05D008555 ORTHO05D010760 2.4e-33 147.9 231 41.1
Gohir.A09G157300 Gossypium hirsutum HOM05D008555 ORTHO05D010760 2.4e-33 147.9 496 30.8
Sc20g0004840 Simmondsia chinensis HOM05D008555 ORTHO05D010760 3.1e-33 147.5 185 47.0
Migut.J00343 Erythranthe guttata HOM05D008555 ORTHO05D010760 1.2e-32 145.6 190 44.2
HPP92_014313 Vanilla planifolia HOM05D008555 ORTHO05D010760 2.0e-32 144.8 298 33.9
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 2.7e-32 144.4 220 43.2
FAN09G2752 Fragaria x ananassa HOM05D008555 ORTHO05D010760 5.0e-31 140.2 411 32.1
HanXRQChr04g0124781 Helianthus annuus HOM05D008555 ORTHO05D010760 5.0e-31 140.2 375 33.3
Duzib093G2048 Durio zibethinus HOM05D008555 ORTHO05D010760 1.1e-30 139.0 209 45.5
FAN02G2195 Fragaria x ananassa HOM05D008555 ORTHO05D010760 1.1e-30 139.0 586 27.5
Gohir.D09G152600 Gossypium hirsutum HOM05D008555 ORTHO05D010760 1.1e-30 139.0 496 29.2
FAN05G3093 Fragaria x ananassa HOM05D008555 ORTHO05D010760 1.9e-30 138.3 598 27.6
SGA_v2.0_scaffold126G33802 Striga asiatica HOM05D008555 ORTHO05D010760 5.6e-30 136.7 374 29.9
Cc06_g02800 Coffea canephora HOM05D008555 ORTHO05D010760 7.3e-30 136.3 185 44.3
AUR62019574 Chenopodium quinoa HOM05D008555 ORTHO05D010760 9.5e-30 136.0 512 29.3
Manes.08G133801 Manihot esculenta HOM05D008555 ORTHO05D010760 2.1e-29 134.8 570 28.9
AUR62042775 Chenopodium quinoa HOM05D008555 ORTHO05D010760 1.4e-28 132.1 566 27.2
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 3.0e-28 131.0 394 30.5
FvH4_6g14100 Fragaria vesca HOM05D008555 ORTHO05D010760 2.6e-27 127.9 614 28.5
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 2.9e-26 124.4 509 25.3
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 8.3e-26 122.9 187 41.7
SalBow3G1082 Salvia bowleyana HOM05D008555 ORTHO05D010760 5.4e-25 120.2 511 28.0
COL.COLO4_14830 Corchorus olitorius HOM05D008555 ORTHO05D010760 3.3e-22 110.9 95 57.9
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 6.2e-21 106.7 147 40.8
RcHm_v2.0_Chr3g0467001 Rosa chinensis HOM05D008555 ORTHO05D010760 2.3e-20 104.8 582 26.1
EL10Ac1g01982 Beta vulgaris HOM05D008555 ORTHO05D010760 5.2e-20 103.6 635 27.1
FvH4_2g35340 Fragaria vesca HOM05D001613 ORTHO05D001556 2.3e-07 61.6 122 30.3
FAN15G0337 Fragaria x ananassa HOM05D001613 ORTHO05D001556 2.3e-07 61.6 122 30.3
FAN20G0144 Fragaria x ananassa HOM05D001613 ORTHO05D001556 2.3e-07 61.6 122 30.3
FAN27G0387 Fragaria x ananassa HOM05D001613 ORTHO05D001556 2.3e-07 61.6 122 30.3
RcHm_v2.0_Chr6g0306581 Rosa chinensis HOM05D001613 ORTHO05D001556 2.3e-07 61.6 122 30.3
Phvul.010G145800 Phaseolus vulgaris HOM05D001613 ORTHO05D001556 3.3e-06 57.8 129 29.5
Lalb_Chr23g0269691 Lupinus albus HOM05D001613 ORTHO05D001556 7.3e-06 56.6 128 27.3


User provided reference genes

Program Settings