Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 2.4e-78 295.4 147 100.0
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 9.0e-78 293.5 147 99.3
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 2.6e-61 238.8 151 78.8
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 3.9e-57 224.9 147 76.9
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 8.8e-57 223.8 144 75.7
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 1.1e-56 223.4 144 75.7
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 3.3e-56 221.9 144 73.6
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 5.7e-56 221.1 147 75.5
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 2.2e-55 219.2 147 72.8
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 4.8e-55 218.0 147 73.5
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 6.3e-55 217.6 146 73.3
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 8.2e-55 217.2 147 72.8
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 8.2e-55 217.2 147 72.8
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.4e-54 216.5 149 73.8
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 1.8e-54 216.1 140 72.9
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.4e-54 215.7 150 70.7
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 6.9e-54 214.2 150 72.0
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 9.1e-54 213.8 146 71.2
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 9.1e-54 213.8 144 71.5
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 9.1e-54 213.8 143 70.6
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 1.2e-53 213.4 143 72.7
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 1.5e-53 213.0 145 73.8
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 2.0e-53 212.6 151 70.9
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 2.0e-53 212.6 151 69.5
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 2.6e-53 212.2 147 70.7
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 2.6e-53 212.2 147 70.7
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 3.4e-53 211.8 150 71.3
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 7.7e-53 210.7 147 70.1
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 7.7e-53 210.7 153 68.0
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.0e-52 210.3 149 69.1
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.3e-52 209.9 146 71.9
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 1.7e-52 209.5 147 72.1
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 1.7e-52 209.5 147 69.4
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 2.2e-52 209.1 147 70.1
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 3.8e-52 208.4 147 69.4
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 3.8e-52 208.4 151 70.9
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 5.0e-52 208.0 153 69.3
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 6.5e-52 207.6 147 69.4
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 6.5e-52 207.6 147 69.4
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 6.5e-52 207.6 146 71.2
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 6.5e-52 207.6 147 70.7
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 6.5e-52 207.6 146 73.3
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 8.5e-52 207.2 147 68.7
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 8.5e-52 207.2 147 68.7
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 8.5e-52 207.2 147 68.7
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 1.1e-51 206.8 144 68.8
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 1.4e-51 206.5 144 70.8
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.9e-51 206.1 147 70.1
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.9e-51 206.1 147 66.7
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 2.5e-51 205.7 147 71.4
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 2.5e-51 205.7 153 67.3
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 4.2e-51 204.9 144 70.1
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 7.2e-51 204.1 144 68.8
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 1.6e-50 203.0 152 68.4
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 1.6e-50 203.0 146 68.5
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 2.1e-50 202.6 147 68.7
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 2.1e-50 202.6 147 68.7
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 2.1e-50 202.6 119 79.0
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.1e-50 202.6 147 68.7
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.7e-50 202.2 146 69.9
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 3.6e-50 201.8 150 67.3
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 4.7e-50 201.4 151 68.2
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 4.7e-50 201.4 115 79.1
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 6.1e-50 201.1 136 72.1
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 6.1e-50 201.1 150 66.7
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 6.1e-50 201.1 148 65.5
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 7.9e-50 200.7 140 70.7
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 7.9e-50 200.7 140 70.0
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 1.4e-49 199.9 146 67.8
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 1.4e-49 199.9 144 68.1
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 1.4e-49 199.9 150 66.0
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.4e-49 199.9 145 67.6
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 1.8e-49 199.5 146 71.9
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.3e-49 199.1 145 70.3
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.3e-49 199.1 147 68.7
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 3.0e-49 198.7 144 67.4
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 3.0e-49 198.7 147 65.3
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 3.9e-49 198.4 136 71.3
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.9e-49 198.4 146 68.5
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 5.1e-49 198.0 146 68.5
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 5.1e-49 198.0 144 69.4
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.5e-48 196.4 135 68.9
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.5e-48 196.4 145 69.7
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 2.0e-48 196.1 144 66.7
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 2.0e-48 196.1 145 65.5
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 4.4e-48 194.9 120 75.0
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 5.7e-48 194.5 145 69.0
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 9.7e-48 193.7 145 69.0
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.3e-47 193.4 145 66.2
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.7e-47 193.0 140 67.9
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.2e-47 192.6 145 68.3
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 2.8e-47 192.2 144 68.8
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 3.7e-47 191.8 141 67.4
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 4.8e-47 191.4 141 68.8
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 4.8e-47 191.4 141 68.1
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 6.3e-47 191.0 144 68.1
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 8.2e-47 190.7 114 74.6
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 8.2e-47 190.7 145 68.3
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.2e-45 186.8 147 64.6
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 1.5e-45 186.4 107 75.7
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 2.0e-45 186.0 141 64.5
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 2.0e-45 186.0 135 67.4
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 2.2e-44 182.6 116 72.4
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 3.8e-44 181.8 144 63.2
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 3.2e-43 178.7 144 63.2
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 7.2e-43 177.6 117 69.2
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 3.0e-41 172.2 147 62.6
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 5.2e-41 171.4 149 61.7
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.5e-40 169.9 147 59.2
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 2.0e-40 169.5 140 64.3
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 3.3e-40 168.7 89 84.3
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.4e-38 163.3 120 72.5
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 9.1e-38 160.6 121 68.6
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 2.0e-37 159.5 90 78.9
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 7.7e-37 157.5 87 80.5
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 6.5e-36 154.5 115 67.8
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 5.2e-33 144.8 115 64.3
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 1.5e-32 143.3 110 66.4
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 6.3e-31 137.9 121 56.2
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.6e-29 133.3 114 60.5
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.6e-29 133.3 91 80.2
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 2.9e-28 129.0 119 60.5
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 8.5e-28 127.5 103 60.2
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.1e-26 122.9 114 57.9
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 1.0e-25 120.6 119 56.3
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.1e-22 110.5 147 44.2
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 1.2e-21 107.1 92 54.3
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 8.9e-17 90.9 90 53.3
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 1.5e-16 90.1 144 36.1
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.1e-14 82.4 83 55.4
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 1.2e-13 80.5 73 61.6
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 5.9e-13 78.2 158 36.7
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 6.6e-12 74.7 73 57.5
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 8.9e-09 64.3 70 54.3


User provided reference genes

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