Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G5009 Papaver somniferum HOM05D004061 ORTHO05D004693 1.3e-125 453.0 219 100.0
PSO339G1720 Papaver somniferum HOM05D004061 ORTHO05D004693 3.2e-119 431.8 218 95.4
Nn2g12823 Nelumbo nucifera HOM05D004061 ORTHO05D004693 2.2e-72 276.2 220 61.4
TAR633G1989 Trochodendron aralioides HOM05D004061 ORTHO05D004693 1.6e-70 270.0 229 60.7
Ca_08806_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 3.0e-69 265.8 229 59.4
Lj3A975G70 Lonicera japonica HOM05D004061 ORTHO05D004693 3.3e-68 262.3 218 57.8
Nn2g10562 Nelumbo nucifera HOM05D004061 ORTHO05D004693 4.3e-68 261.9 220 61.8
CiPaw.09G185500 Carya illinoinensis HOM05D004061 ORTHO05D004693 5.6e-68 261.5 224 58.5
Actinidia05286 Actinidia chinensis HOM05D004061 ORTHO05D004693 1.6e-67 260.0 228 56.6
CiPaw.10G139500 Carya illinoinensis HOM05D004061 ORTHO05D004693 2.1e-67 259.6 224 57.1
TPR.G21459 Trifolium pratense HOM05D004061 ORTHO05D004693 3.7e-67 258.8 229 57.6
QL07p045968 Quercus lobata HOM05D004061 ORTHO05D004693 6.2e-67 258.1 226 56.6
Rhsim05G0184700 Rhododendron simsii HOM05D004061 ORTHO05D004693 1.4e-66 256.9 224 58.0
Lj1g0024664 Lotus japonicus HOM05D004061 ORTHO05D004693 4.0e-66 255.4 202 61.4
Glyma.13G134900 Glycine max HOM05D004061 ORTHO05D004693 5.3e-66 255.0 217 56.7
Nitab4.5_0006252g0020 Nicotiana tabacum HOM05D004061 ORTHO05D004693 6.9e-66 254.6 212 59.4
Lalb_Chr25g0289361 Lupinus albus HOM05D004061 ORTHO05D004693 9.0e-66 254.2 220 56.4
Nitab4.5_0000643g0160 Nicotiana tabacum HOM05D004061 ORTHO05D004693 1.2e-65 253.8 211 59.7
ClCG04G008650 Citrullus lanatus HOM05D004061 ORTHO05D004693 2.0e-65 253.1 227 58.1
Duzib128G0701 Durio zibethinus HOM05D004061 ORTHO05D004693 2.0e-65 253.1 227 56.4
Medtr7g100150 Medicago truncatula HOM05D004061 ORTHO05D004693 2.0e-65 253.1 228 55.3
Psat0s1952g0040 Pisum sativum HOM05D004061 ORTHO05D004693 2.0e-65 253.1 229 55.5
MBI05_g22082_MAGBIO Magnolia biondii HOM05D004061 ORTHO05D004693 3.4e-65 252.3 208 59.1
PSO699G0012 Papaver somniferum HOM05D004061 ORTHO05D004693 5.8e-65 251.5 209 59.8
vmacro08681 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 5.8e-65 251.5 193 62.2
Thecc.05G049300 Theobroma cacao HOM05D004061 ORTHO05D004693 1.0e-64 250.8 227 57.7
Migut.L01642 Erythranthe guttata HOM05D004061 ORTHO05D004693 1.3e-64 250.4 214 58.4
Haze_20694 Corylus avellana HOM05D004061 ORTHO05D004693 3.8e-64 248.8 255 50.2
Peaxi162Scf00604g00010 Petunia axillaris HOM05D004061 ORTHO05D004693 8.4e-64 247.7 204 57.8
Oeu035162.1 Olea europaea HOM05D004061 ORTHO05D004693 1.4e-63 246.9 205 55.6
GSVIVG01025578001 Vitis vinifera HOM05D004061 ORTHO05D004693 1.4e-63 246.9 220 55.9
Cfa017465 Carpinus fangiana HOM05D004061 ORTHO05D004693 2.5e-63 246.1 188 60.1
Glyma.10G046900 Glycine max HOM05D004061 ORTHO05D004693 4.2e-63 245.4 219 55.7
vmacro20095 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 5.5e-63 245.0 201 60.7
Nitab4.5_0000202g0310 Nicotiana tabacum HOM05D004061 ORTHO05D004693 7.1e-63 244.6 212 57.5
Phvul.007G161100 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 9.3e-63 244.2 215 55.8
Ciclev10012656m.g Citrus clementina HOM05D004061 ORTHO05D004693 2.7e-62 242.7 223 54.3
arahy.Tifrunner.gnm1.ann1.Y28VT2 Arachis hypogaea HOM05D004061 ORTHO05D004693 6.0e-62 241.5 227 53.7
MSTRG.19117 Avicennia marina HOM05D004061 ORTHO05D004693 6.0e-62 241.5 224 54.9
Lj5g0017469 Lotus japonicus HOM05D004061 ORTHO05D004693 7.9e-62 241.1 216 54.2
Sopen09g001820 Solanum pennellii HOM05D004061 ORTHO05D004693 7.9e-62 241.1 214 57.0
CANSAT80G1299 Cannabis sativa HOM05D004061 ORTHO05D004693 1.8e-61 240.0 215 57.7
Glyma.19G176300 Glycine max HOM05D004061 ORTHO05D004693 3.0e-61 239.2 212 55.2
Solyc09g005960.4 Solanum lycopersicum HOM05D004061 ORTHO05D004693 3.9e-61 238.8 214 55.6
Potri.016G081900 Populus trichocarpa HOM05D004061 ORTHO05D004693 5.1e-61 238.4 213 55.4
Lalb_Chr20g0113041 Lupinus albus HOM05D004061 ORTHO05D004693 6.7e-61 238.0 234 53.0
unitig_8.g4322 Utricularia gibba HOM05D004061 ORTHO05D004693 6.7e-61 238.0 199 55.3
ATR0594G174 Amborella trichopoda HOM05D004061 ORTHO05D004693 8.7e-61 237.7 212 54.7
CARHR163390 Cardamine hirsuta HOM05D004061 ORTHO05D004693 1.9e-60 236.5 224 56.2
Aqoxy4G03101 Aquilegia oxysepala HOM05D004061 ORTHO05D004693 2.5e-60 236.1 206 56.3
Duzib093G0371 Durio zibethinus HOM05D004061 ORTHO05D004693 3.3e-60 235.7 228 54.4
HanXRQChr13g0392181 Helianthus annuus HOM05D004061 ORTHO05D004693 4.3e-60 235.3 211 58.3
Manes.08G000500 Manihot esculenta HOM05D004061 ORTHO05D004693 9.6e-60 234.2 205 56.1
arahy.Tifrunner.gnm1.ann1.H9GTJP Arachis hypogaea HOM05D004061 ORTHO05D004693 1.3e-59 233.8 254 48.0
Sp5g08850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 1.3e-59 233.8 219 57.5
C06p21460 Brassica napus HOM05D004061 ORTHO05D004693 2.1e-59 233.0 224 56.7
Carub.0005s2006 Capsella rubella HOM05D004061 ORTHO05D004693 2.1e-59 233.0 224 55.4
Cc06_g03260 Coffea canephora HOM05D004061 ORTHO05D004693 2.1e-59 233.0 208 54.8
Sed0004679 Sechium edule HOM05D004061 ORTHO05D004693 3.7e-59 232.3 230 53.9
Sed0004085 Sechium edule HOM05D004061 ORTHO05D004693 4.8e-59 231.9 227 52.4
A07p21670 Brassica napus HOM05D004061 ORTHO05D004693 6.3e-59 231.5 224 54.9
Sabra16G0089600 Salix brachista HOM05D004061 ORTHO05D004693 6.3e-59 231.5 252 48.4
Lsat_1_v5_gn_1_54740 Lactuca sativa HOM05D004061 ORTHO05D004693 8.2e-59 231.1 219 51.1
TWI77G0888 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 8.2e-59 231.1 198 55.6
AT3G53490 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 1.1e-58 230.7 224 54.5
VMungo1383G1764 Vigna mungo HOM05D004061 ORTHO05D004693 1.4e-58 230.3 213 54.5
TWI74G1169 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 1.8e-58 229.9 226 53.5
BraA07t29848Z Brassica rapa HOM05D004061 ORTHO05D004693 2.4e-58 229.6 224 55.4
Glyma.03G175700 Glycine max HOM05D004061 ORTHO05D004693 2.4e-58 229.6 223 53.4
BcaC08g44627 Brassica carinata HOM05D004061 ORTHO05D004693 3.1e-58 229.2 224 56.2
BolC6t37328H Brassica oleracea HOM05D004061 ORTHO05D004693 4.1e-58 228.8 224 55.8
ECA248G1662 Erigeron canadensis HOM05D004061 ORTHO05D004693 9.0e-58 227.6 211 55.0
Aa31LG10G9640 Aethionema arabicum HOM05D004061 ORTHO05D004693 1.5e-57 226.9 224 54.9
Thhalv10010698m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 2.0e-57 226.5 213 57.3
arahy.Tifrunner.gnm1.ann1.9VFE0J Arachis hypogaea HOM05D004061 ORTHO05D004693 2.6e-57 226.1 231 51.5
Solyc10g084500.1 Solanum lycopersicum HOM05D004061 ORTHO05D004693 2.6e-57 226.1 211 51.7
CAN.G435.5 Capsicum annuum HOM05D004061 ORTHO05D004693 3.4e-57 225.7 201 53.7
Lj2C103T21 Lonicera japonica HOM05D004061 ORTHO05D004693 3.4e-57 225.7 195 56.9
Sc20g0004290 Simmondsia chinensis HOM05D004061 ORTHO05D004693 3.4e-57 225.7 213 54.0
Peaxi162Scf00597g00310 Petunia axillaris HOM05D004061 ORTHO05D004693 5.9e-57 224.9 232 50.9
PGSC0003DMG400011053 Solanum tuberosum HOM05D004061 ORTHO05D004693 5.9e-57 224.9 211 52.1
Sopen10g033930 Solanum pennellii HOM05D004061 ORTHO05D004693 7.6e-57 224.6 211 52.1
arahy.Tifrunner.gnm1.ann1.6R95LH Arachis hypogaea HOM05D004061 ORTHO05D004693 1.0e-56 224.2 231 51.1
EL10Ac7g17278 Beta vulgaris HOM05D004061 ORTHO05D004693 2.9e-56 222.6 202 56.9
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 5.0e-56 221.9 196 56.1
Gohir.A01G218200 Gossypium hirsutum HOM05D004061 ORTHO05D004693 5.0e-56 221.9 217 52.1
AL5G34410 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 6.5e-56 221.5 224 53.6
Medtr1g067320 Medicago truncatula HOM05D004061 ORTHO05D004693 6.5e-56 221.5 188 53.2
AUR62044395 Chenopodium quinoa HOM05D004061 ORTHO05D004693 2.5e-55 219.5 196 55.1
Cpa.g.sc114.23 Carica papaya HOM05D004061 ORTHO05D004693 7.2e-55 218.0 227 52.0
MELO3C003083.2 Cucumis melo HOM05D004061 ORTHO05D004693 1.2e-54 217.2 202 53.0
Dinv35674 Davidia involucrata HOM05D004061 ORTHO05D004693 1.6e-54 216.9 186 59.7
Phvul.001G172800 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 4.6e-54 215.3 206 51.0
CsaV3_4G024510 Cucumis sativus L. HOM05D004061 ORTHO05D004693 7.9e-54 214.5 231 48.5
CDE07G0262 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.3e-53 213.8 196 53.6
MD04G1110000 Malus domestica HOM05D004061 ORTHO05D004693 1.3e-53 213.8 230 50.9
VMungo0720G0415 Vigna mungo HOM05D004061 ORTHO05D004693 1.8e-53 213.4 263 43.7
MD12G1131500 Malus domestica HOM05D004061 ORTHO05D004693 3.0e-53 212.6 230 50.4
THA.LOC104806513 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 3.0e-53 212.6 190 56.3
HanXRQChr11g0349611 Helianthus annuus HOM05D004061 ORTHO05D004693 3.9e-53 212.2 215 51.6
Gorai.001G248900 Gossypium raimondii HOM05D004061 ORTHO05D004693 6.7e-53 211.5 231 45.9
Gohir.D01G207100 Gossypium hirsutum HOM05D004061 ORTHO05D004693 3.3e-52 209.1 250 46.4
HPP92_006587 Vanilla planifolia HOM05D004061 ORTHO05D004693 3.3e-52 209.1 204 51.5
TPR.G7552 Trifolium pratense HOM05D004061 ORTHO05D004693 4.3e-52 208.8 185 53.0
Dinv35675 Davidia involucrata HOM05D004061 ORTHO05D004693 5.7e-52 208.4 154 63.6
Lalb_Chr01g0019101 Lupinus albus HOM05D004061 ORTHO05D004693 1.3e-51 207.2 229 48.9
SGA_v2.0_scaffold35G14186 Striga asiatica HOM05D004061 ORTHO05D004693 2.8e-51 206.1 206 51.0
FAN05G3362 Fragaria x ananassa HOM05D004061 ORTHO05D004693 3.7e-51 205.7 229 49.8
Os03g0282800 Oryza sativa ssp. japonica HOM05D004061 ORTHO05D004693 3.7e-51 205.7 205 52.2
SalBow4G2839 Salvia bowleyana HOM05D004061 ORTHO05D004693 6.3e-51 204.9 225 46.2
Ca_11436_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 8.2e-51 204.5 195 51.8
Gohir.D13G097300 Gossypium hirsutum HOM05D004061 ORTHO05D004693 1.1e-50 204.1 231 45.5
Gorai.002G252200 Gossypium raimondii HOM05D004061 ORTHO05D004693 1.4e-50 203.8 250 46.0
PGR004G1528 Punica granatum HOM05D004061 ORTHO05D004693 2.4e-50 203.0 227 48.9
Gohir.A13G095435 Gossypium hirsutum HOM05D004061 ORTHO05D004693 9.1e-50 201.1 234 44.9
Psat6g069360 Pisum sativum HOM05D004061 ORTHO05D004693 9.1e-50 201.1 186 50.5
RcHm_v2.0_Chr3g0468021 Rosa chinensis HOM05D004061 ORTHO05D004693 9.1e-50 201.1 228 48.7
FvH4_6g14800 Fragaria vesca HOM05D004061 ORTHO05D004693 1.2e-49 200.7 229 48.9
FAN14G1560 Fragaria x ananassa HOM05D004061 ORTHO05D004693 1.2e-49 200.7 229 48.9
unitig_578.g16044 Utricularia gibba HOM05D004061 ORTHO05D004693 1.2e-49 200.7 206 50.0
Atru.chr8.2505 Acer truncatum HOM05D004061 ORTHO05D004693 3.4e-49 199.1 228 49.6
C04p39050 Brassica napus HOM05D004061 ORTHO05D004693 3.4e-49 199.1 224 50.0
BolC4t25479H Brassica oleracea HOM05D004061 ORTHO05D004693 3.4e-49 199.1 224 49.6
Aa31LG10G9670 Aethionema arabicum HOM05D004061 ORTHO05D004693 1.0e-48 197.6 201 53.7
FAN02G3315 Fragaria x ananassa HOM05D004061 ORTHO05D004693 2.2e-48 196.4 229 48.9
Hund12072 Selenicereus undatus HOM05D004061 ORTHO05D004693 3.8e-48 195.7 228 47.4
Pp3c2_4500 Physcomitrium patens HOM05D004061 ORTHO05D004693 8.5e-48 194.5 215 48.4
Prupe.6G245800 Prunus persica HOM05D004061 ORTHO05D004693 2.5e-47 193.0 231 48.1
SHI12648 Sapria himalayana HOM05D004061 ORTHO05D004693 5.5e-47 191.8 195 50.8
Carub.0006s0148 Capsella rubella HOM05D004061 ORTHO05D004693 9.4e-47 191.0 221 43.9
HPP92_015408 Vanilla planifolia HOM05D004061 ORTHO05D004693 1.6e-46 190.3 208 47.6
Oeu049603.1 Olea europaea HOM05D004061 ORTHO05D004693 2.3e-45 186.4 138 62.3
AT5G02720 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 3.9e-45 185.7 221 43.0
BcaC02g09159 Brassica carinata HOM05D004061 ORTHO05D004693 1.1e-44 184.1 224 47.8
THA.LOC104816298 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 1.1e-44 184.1 212 46.7
Sp6g39850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 3.3e-44 182.6 226 42.0
Dinv37231 Davidia involucrata HOM05D004061 ORTHO05D004693 4.4e-44 182.2 141 60.3
BcaNung03280 Brassica carinata HOM05D004061 ORTHO05D004693 2.2e-43 179.9 229 42.4
BolC9t60131H Brassica oleracea HOM05D004061 ORTHO05D004693 6.3e-43 178.3 224 43.3
BraA04t16312Z Brassica rapa HOM05D004061 ORTHO05D004693 6.3e-43 178.3 223 46.6
BraA10t45336Z Brassica rapa HOM05D004061 ORTHO05D004693 1.8e-42 176.8 225 41.8
Pp3c17_20730 Physcomitrium patens HOM05D004061 ORTHO05D004693 1.8e-42 176.8 214 48.1
Pp3c17_20731 Physcomitrium patens HOM05D004061 ORTHO05D004693 1.8e-42 176.8 214 48.1
A04p06100 Brassica napus HOM05D004061 ORTHO05D004693 5.3e-42 175.3 223 46.2
SMO164G0167 Selaginella moellendorffii HOM05D004061 ORTHO05D004693 5.3e-42 175.3 188 49.5
A10p32990 Brassica napus HOM05D004061 ORTHO05D004693 9.1e-42 174.5 238 40.3
PSO675G5312 Papaver somniferum HOM05D004061 ORTHO05D004693 3.4e-41 172.6 200 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2779 Anthoceros agrestis HOM05D004061 ORTHO05D004693 1.7e-40 170.2 213 46.0
Mapoly0179s0007 Marchantia polymorpha HOM05D004061 ORTHO05D004693 2.1e-38 163.3 239 39.3
Ah.08g212360 Amaranthus hybridus HOM05D004061 ORTHO05D004693 7.9e-38 161.4 210 44.8
HPP92_026988 Vanilla planifolia HOM05D004061 ORTHO05D004693 1.1e-36 157.5 184 45.1
Aqoxy4G03086 Aquilegia oxysepala HOM05D003496 ORTHO05D003909 2.4e-34 149.8 186 42.5
BcaB02g08525 Brassica carinata HOM05D004061 ORTHO05D004693 5.9e-33 145.2 159 51.6
AUR62042140 Chenopodium quinoa HOM05D004061 ORTHO05D004693 5.9e-33 145.2 132 52.3
COL.COLO4_10313 Corchorus olitorius HOM05D004061 ORTHO05D004693 1.0e-32 144.4 141 51.8
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 1.6e-30 137.1 143 49.0
ATR0594G139 Amborella trichopoda HOM05D004061 ORTHO05D004693 5.7e-28 128.6 181 42.5
BcaC06g32007 Brassica carinata HOM05D004061 ORTHO05D004693 2.0e-25 120.2 227 34.4
C09p73960 Brassica napus HOM05D004061 ORTHO05D004693 5.9e-25 118.6 226 33.2
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 3.8e-24 115.9 259 33.2
AL6G11960 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 4.2e-23 112.5 137 40.9
Thhalv10016063m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 2.7e-22 109.8 137 41.6
ATR0594G136 Amborella trichopoda HOM05D004061 ORTHO05D004693 2.0e-17 93.6 159 35.8
Zm00001eb397300 Zea mays HOM05D004061 ORTHO05D004693 5.0e-16 89.0 104 46.2
vmacro08682 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 7.2e-15 85.1 71 57.7
BcaB02g07781 Brassica carinata HOM05D004061 ORTHO05D004693 2.8e-14 83.2 89 53.9
Zm00001eb012900 Zea mays HOM05D004061 ORTHO05D004693 4.7e-14 82.4 71 59.2
CARHR210670 Cardamine hirsuta HOM05D004061 ORTHO05D004693 1.5e-12 77.4 53 64.2
AUR62041005 Chenopodium quinoa HOM05D004061 ORTHO05D004693 4.4e-12 75.9 65 53.8
BolC3t12673H Brassica oleracea HOM05D004061 ORTHO05D004693 4.1e-10 69.3 107 38.3
Zm00001eb346430 Zea mays HOM05D004061 ORTHO05D004693 7.0e-10 68.6 52 61.5
Zm00001eb131400 Zea mays HOM05D004061 ORTHO05D001113 1.6e-09 67.4 52 59.6
C03p01140 Brassica napus HOM05D004061 ORTHO05D004693 5.9e-09 65.5 104 36.5
Zm00001eb341480 Zea mays HOM05D014943 ORTHO05D019389 1.0e-08 64.7 52 59.6
TWI14G0848 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 1.2e-06 57.8 50 60.0
TWI23G1156 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 1.6e-06 57.4 50 62.0
GSVIVG01025943001 Vitis vinifera HOM05D004289 ORTHO05D005141 2.8e-06 56.6 59 52.5
RcHm_v2.0_Chr3g0495521 Rosa chinensis HOM05D004289 ORTHO05D005141 3.6e-06 56.2 60 50.0
FvH4_5g32580 Fragaria vesca HOM05D004289 ORTHO05D005141 6.1e-06 55.5 61 54.1
RcHm_v2.0_Chr7g0229261 Rosa chinensis HOM05D004289 ORTHO05D005141 6.1e-06 55.5 61 54.1
FAN13G3078 Fragaria x ananassa HOM05D004289 ORTHO05D005141 8.0e-06 55.1 61 54.1
MD15G1403500 Malus domestica HOM05D004289 ORTHO05D005141 8.0e-06 55.1 49 59.2
Prupe.1G549500 Prunus persica HOM05D004289 ORTHO05D005141 8.0e-06 55.1 66 43.9
PGR042G0739 Punica granatum HOM05D004289 ORTHO05D005141 8.0e-06 55.1 31 80.6


User provided reference genes

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