Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 1.7e-29 132.5 93 100.0
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 4.9e-29 131.0 93 97.8
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 4.9e-29 131.0 93 97.8
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-23 112.8 94 89.4
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 2.7e-19 98.6 89 79.8
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 2.7e-19 98.6 89 79.8
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 2.7e-19 98.6 89 80.9
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 2.7e-19 98.6 89 58.4
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 4.0e-15 84.7 86 53.5
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-14 83.2 86 65.1
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-14 83.2 86 65.1
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 7.6e-14 80.5 85 48.2
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 9.9e-14 80.1 87 70.1
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 1.3e-13 79.7 84 64.3
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.9e-13 78.6 84 51.2
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 2.9e-13 78.6 86 48.8
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 4.9e-13 77.8 86 50.0
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 4.9e-13 77.8 86 50.0
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 8.4e-13 77.0 89 61.8
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.9e-12 75.9 86 55.8
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 2.4e-12 75.5 89 66.3
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 4.2e-12 74.7 84 48.8
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.2e-12 74.7 89 59.6
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 5.4e-12 74.3 87 42.5
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 7.1e-12 73.9 90 46.7
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 7.1e-12 73.9 88 48.9
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 7.1e-12 73.9 88 48.9
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 7.1e-12 73.9 88 48.9
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 7.1e-12 73.9 88 48.9
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 7.1e-12 73.9 88 48.9
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 7.1e-12 73.9 88 48.9
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 7.1e-12 73.9 88 48.9
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 7.1e-12 73.9 88 48.9
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.2e-11 73.2 85 43.5
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 1.2e-11 73.2 85 43.5
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 1.6e-11 72.8 85 45.9
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.6e-11 72.8 83 48.2
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 2.1e-11 72.4 86 45.3
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.1e-11 72.4 86 46.5
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 2.7e-11 72.0 83 47.0
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 2.7e-11 72.0 83 44.6
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 2.7e-11 72.0 85 43.5
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.6e-11 71.2 86 62.8
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.6e-11 71.2 86 62.8
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 4.6e-11 71.2 85 42.4
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.0e-11 70.9 84 45.2
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 7.8e-11 70.5 84 45.2
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 7.8e-11 70.5 83 43.4
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 1.0e-10 70.1 84 46.4
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 1.3e-10 69.7 84 45.2
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 1.7e-10 69.3 82 48.8
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.3e-10 68.9 84 45.2
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-10 68.6 88 47.7
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 5.1e-10 67.8 87 64.4
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 8.7e-10 67.0 86 44.2
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 8.7e-10 67.0 83 63.9
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 1.1e-09 66.6 85 69.4
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 2.5e-09 65.5 83 62.7
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 3.3e-09 65.1 83 62.7
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 4.3e-09 64.7 89 40.4
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 9.6e-09 63.5 70 45.7
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 1.3e-08 63.2 82 46.3
Aqoxy5G00093 Aquilegia oxysepala HOM05D005842 ORTHO05D007077 1.6e-08 62.8 93 53.8
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.1e-08 62.4 86 45.3
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 6.2e-08 60.8 86 44.2
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 6.2e-08 60.8 83 42.2
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 6.2e-08 60.8 90 41.1
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 8.1e-08 60.5 86 43.0
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 8.1e-08 60.5 86 43.0
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 8.1e-08 60.5 80 43.8
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 1.1e-07 60.1 87 69.0
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 1.4e-07 59.7 82 65.9
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 1.4e-07 59.7 82 65.9
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 1.4e-07 59.7 82 65.9
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 1.4e-07 59.7 82 65.9
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 1.4e-07 59.7 100 59.0
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 1.8e-07 59.3 89 40.4
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 1.8e-07 59.3 96 39.6
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 1.8e-07 59.3 106 50.9
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 2.4e-07 58.9 63 49.2
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 3.1e-07 58.5 80 42.5
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 5.3e-07 57.8 70 40.0
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 5.3e-07 57.8 80 41.2
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 1.5e-06 56.2 70 50.0
HPP92_007287 Vanilla planifolia HOM05D005842 ORTHO05D007077 1.5e-06 56.2 37 67.6
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 2.6e-06 55.5 34 70.6
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 2.6e-06 55.5 106 47.2
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 2.6e-06 55.5 82 63.4
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 4.4e-06 54.7 37 62.2
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 4.4e-06 54.7 34 73.5
Medtr1g045950 Medicago truncatula HOM05D005842 ORTHO05D007077 4.4e-06 54.7 39 66.7
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 4.4e-06 54.7 82 37.8
TWI53G0373 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 4.4e-06 54.7 35 68.6
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 5.8e-06 54.3 39 66.7
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 5.8e-06 54.3 36 63.9
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 9.9e-06 53.5 34 70.6


User provided reference genes

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