Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4964 Papaver somniferum HOM05D007083 ORTHO05D008801 7.3e-116 422.2 214 100.0
PSO339G4029 Papaver somniferum HOM05D007083 ORTHO05D008801 6.2e-99 365.9 215 87.0
TAR369G0752 Trochodendron aralioides HOM05D007083 ORTHO05D008801 1.1e-31 142.5 225 40.0
Nn7g35939 Nelumbo nucifera HOM05D007083 ORTHO05D008801 8.8e-29 132.9 225 38.2
Aqoxy7G03503 Aquilegia oxysepala HOM05D007083 ORTHO05D008801 1.4e-26 125.6 207 38.6
Prupe.8G019300 Prunus persica HOM05D007083 ORTHO05D008801 3.1e-26 124.4 214 35.5
Dinv23578 Davidia involucrata HOM05D007083 ORTHO05D008801 9.1e-26 122.9 226 36.7
CiPaw.06G139300 Carya illinoinensis HOM05D007083 ORTHO05D008801 4.5e-25 120.6 225 34.7
CSS0008892 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 7.7e-25 119.8 206 38.3
CSS0024065 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 7.7e-25 119.8 206 38.3
Nitab4.5_0001401g0200 Nicotiana tabacum HOM05D007083 ORTHO05D008801 1.1e-23 115.9 166 41.0
Solyc01g109060.4 Solanum lycopersicum HOM05D007083 ORTHO05D008801 3.2e-23 114.4 166 40.4
Sopen01g051260 Solanum pennellii HOM05D007083 ORTHO05D008801 3.2e-23 114.4 182 39.0
PGSC0003DMG400025930 Solanum tuberosum HOM05D007083 ORTHO05D008801 5.5e-23 113.6 182 39.0
ATR0598G052 Amborella trichopoda HOM05D007083 ORTHO05D008801 9.4e-23 112.8 185 34.6
Gohir.D12G042300 Gossypium hirsutum HOM05D007083 ORTHO05D008801 2.1e-22 111.7 190 34.2
Gorai.008G044300 Gossypium raimondii HOM05D007083 ORTHO05D008801 4.7e-22 110.5 190 33.2
Lj2P412T37 Lonicera japonica HOM05D007083 ORTHO05D008801 6.1e-22 110.2 209 38.3
MBI19_g17433_MAGBIO Magnolia biondii HOM05D007083 ORTHO05D008801 6.1e-22 110.2 171 37.4
CANSAT25G2501 Cannabis sativa HOM05D007083 ORTHO05D008801 8.0e-22 109.8 219 33.8
MSTRG.5378 Avicennia marina HOM05D007083 ORTHO05D008801 1.4e-21 109.0 166 38.0
Manes.15G145600 Manihot esculenta HOM05D007083 ORTHO05D008801 2.3e-21 108.2 204 31.9
CAN.G322.86 Capsicum annuum HOM05D007083 ORTHO05D008801 6.8e-21 106.7 166 38.6
Thecc.02G028500 Theobroma cacao HOM05D007083 ORTHO05D008801 6.8e-21 106.7 215 33.0
GSVIVG01029769001 Vitis vinifera HOM05D007083 ORTHO05D008801 8.8e-21 106.3 192 33.3
Gohir.A12G030100 Gossypium hirsutum HOM05D007083 ORTHO05D008801 1.2e-20 105.9 190 33.2
Sc18g0004780 Simmondsia chinensis HOM05D007083 ORTHO05D008801 1.2e-20 105.9 183 34.4
Rhsim05G0078900 Rhododendron simsii HOM05D007083 ORTHO05D008801 1.5e-20 105.5 206 34.0
Cpa.g.sc109.26 Carica papaya HOM05D007083 ORTHO05D008801 2.6e-20 104.8 163 36.8
Lsat_1_v5_gn_0_45320 Lactuca sativa HOM05D007083 ORTHO05D008801 2.6e-20 104.8 207 33.8
Lsat_1_v5_gn_5_117460 Lactuca sativa HOM05D007083 ORTHO05D008801 2.6e-20 104.8 207 33.8
Haze_02465 Corylus avellana HOM05D007083 ORTHO05D008801 5.7e-20 103.6 158 38.0
HanXRQChr12g0374971 Helianthus annuus HOM05D007083 ORTHO05D008801 1.7e-19 102.1 162 35.2
Phvul.001G085800 Phaseolus vulgaris HOM05D007083 ORTHO05D008801 4.8e-19 100.5 164 34.8
CsaV3_7G010110 Cucumis sativus L. HOM05D007083 ORTHO05D008801 6.3e-19 100.1 158 36.7
TWI31G0787 Tripterygium wilfordii HOM05D007083 ORTHO05D008801 6.3e-19 100.1 178 36.5
DCAR_003627 Daucus carota HOM05D007083 ORTHO05D008801 1.8e-18 98.6 166 35.5
A07p05120 Brassica napus HOM05D007083 ORTHO05D008801 2.4e-18 98.2 163 32.5
Duzib052G0394 Durio zibethinus HOM05D007083 ORTHO05D008801 3.1e-18 97.8 225 30.2
Sabra18G0050700 Salix brachista HOM05D007083 ORTHO05D008801 4.1e-18 97.4 229 28.8
Aa31LG8G13290 Aethionema arabicum HOM05D007083 ORTHO05D008801 5.4e-18 97.1 185 31.4
BraA07t28306Z Brassica rapa HOM05D007083 ORTHO05D008801 9.1e-18 96.3 163 31.9
THA.LOC104819595 Tarenaya hassleriana HOM05D007083 ORTHO05D008801 9.1e-18 96.3 155 37.4
Cc02_g18190 Coffea canephora HOM05D007083 ORTHO05D008801 1.2e-17 95.9 214 30.4
EL10Ac9g21792 Beta vulgaris HOM05D007083 ORTHO05D008801 1.6e-17 95.5 207 31.9
MELO3C018417.2 Cucumis melo HOM05D007083 ORTHO05D008801 1.6e-17 95.5 182 36.3
Glyma.12G048300 Glycine max HOM05D007083 ORTHO05D008801 1.6e-17 95.5 199 31.2
Ah.01g019870 Amaranthus hybridus HOM05D007083 ORTHO05D008801 2.0e-17 95.1 162 35.8
CARHR106000 Cardamine hirsuta HOM05D007083 ORTHO05D008801 2.0e-17 95.1 210 30.5
arahy.Tifrunner.gnm1.ann1.JD2ZC9 Arachis hypogaea HOM05D007083 ORTHO05D008801 2.7e-17 94.7 167 34.7
C07p08180 Brassica napus HOM05D007083 ORTHO05D008801 3.5e-17 94.4 187 31.0
Ciclev10030406m.g Citrus clementina HOM05D007083 ORTHO05D008801 3.5e-17 94.4 211 30.8
FvH4_2g07360 Fragaria vesca HOM05D007083 ORTHO05D008801 3.5e-17 94.4 214 32.2
PGR042G0769 Punica granatum HOM05D007083 ORTHO05D008801 3.5e-17 94.4 183 34.4
Sc18g0004860 Simmondsia chinensis HOM05D007083 ORTHO05D008801 3.5e-17 94.4 168 32.7
Sed0019239 Sechium edule HOM05D007083 ORTHO05D008801 4.5e-17 94.0 153 37.3
AUR62011398 Chenopodium quinoa HOM05D007083 ORTHO05D008801 5.9e-17 93.6 191 33.5
Potri.004G147700 Populus trichocarpa HOM05D007083 ORTHO05D008801 5.9e-17 93.6 229 29.3
BcaC06g36074 Brassica carinata HOM05D007083 ORTHO05D008801 7.7e-17 93.2 187 30.5
BolC7t41234H Brassica oleracea HOM05D007083 ORTHO05D008801 7.7e-17 93.2 187 30.5
AUR62016660 Chenopodium quinoa HOM05D007083 ORTHO05D008801 1.3e-16 92.4 167 35.3
VMungo1383G2401 Vigna mungo HOM05D007083 ORTHO05D008801 1.7e-16 92.0 162 32.7
RcHm_v2.0_Chr6g0259961 Rosa chinensis HOM05D007083 ORTHO05D008801 2.2e-16 91.7 163 32.5
FAN20G1975 Fragaria x ananassa HOM05D007083 ORTHO05D008801 2.9e-16 91.3 214 33.2
AT2G15630 Arabidopsis thaliana HOM05D007083 ORTHO05D008801 3.8e-16 90.9 166 29.5
Sp3g28900 Schrenkiella parvula HOM05D007083 ORTHO05D008801 5.0e-16 90.5 165 30.9
FAN24G0977 Fragaria x ananassa HOM05D007083 ORTHO05D008801 8.5e-16 89.7 214 31.8
Atru.chr5.2875 Acer truncatum HOM05D007083 ORTHO05D008801 1.1e-15 89.4 198 31.3
Eucgr.J00091 Eucalyptus grandis HOM05D007083 ORTHO05D008801 1.1e-15 89.4 215 31.2
AL3G47400 Arabidopsis lyrata HOM05D007083 ORTHO05D008801 1.5e-15 89.0 185 29.7
SHI08173 Sapria himalayana HOM05D007083 ORTHO05D008801 1.9e-15 88.6 158 32.9
arahy.Tifrunner.gnm1.ann1.CNDX61 Arachis hypogaea HOM05D007083 ORTHO05D008801 7.2e-15 86.7 168 33.3
BcaB03g14591 Brassica carinata HOM05D007083 ORTHO05D008801 7.2e-15 86.7 160 30.0
Sabra04G0098000 Salix brachista HOM05D007083 ORTHO05D008801 1.2e-14 85.9 131 32.8
HPP92_019625 Vanilla planifolia HOM05D007083 ORTHO05D008801 2.7e-14 84.7 210 28.1
ECA236G1626 Erigeron canadensis HOM05D007083 ORTHO05D008801 6.1e-14 83.6 162 32.1
Lj3g0002320 Lotus japonicus HOM05D007083 ORTHO05D008801 6.1e-14 83.6 205 31.2
SalBow3G3241 Salvia bowleyana HOM05D001193 ORTHO05D001016 5.2e-13 80.5 179 30.7
Thhalv10022592m.g Eutrema salsugineum HOM05D007083 ORTHO05D008801 6.8e-13 80.1 166 26.5
Medtr4g068360 Medicago truncatula HOM05D007083 ORTHO05D008801 2.6e-12 78.2 206 29.6
Potri.009G109001 Populus trichocarpa HOM05D007083 ORTHO05D008801 2.6e-12 78.2 155 26.5
Glyma.11G123700 Glycine max HOM05D007083 ORTHO05D008801 1.4e-10 72.4 184 29.3
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 9.2e-10 69.7 110 35.5
Actinidia17838 Actinidia chinensis HOM05D007083 ORTHO05D008801 2.0e-09 68.6 204 28.9
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 1.0e-08 66.2 106 33.0
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 1.3e-08 65.9 106 33.0
TPR.G10240 Trifolium pratense HOM05D007083 ORTHO05D008801 2.9e-08 64.7 63 46.0
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.5e-07 61.6 233 25.3
Migut.N01212 Erythranthe guttata HOM05D007083 ORTHO05D008801 3.3e-07 61.2 156 30.8
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.2e-06 59.3 223 26.5
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 1.6e-06 58.9 107 30.8
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 2.1e-06 58.5 166 24.7
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 2.8e-06 58.2 169 26.6
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 8.0e-06 56.6 106 29.2


User provided reference genes

Program Settings