Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 0.0e+00 1963.0 1001 100.0
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 0.0e+00 1836.6 1002 93.9
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 1.2e-200 704.5 1025 45.5
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 3.6e-194 682.9 1025 43.5
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 2.6e-192 676.8 1030 43.7
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 6.8e-185 652.1 1029 43.1
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 5.7e-184 649.0 1015 42.3
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 2.2e-183 647.1 1023 43.0
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 3.7e-183 646.4 1033 43.4
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 1.4e-182 644.4 1026 43.3
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.0e-180 638.3 1024 42.9
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 7.3e-179 632.1 1029 41.8
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 4.7e-178 629.4 791 48.0
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 6.8e-177 625.5 1023 42.6
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 6.8e-177 625.5 1021 40.7
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 1.2e-176 624.8 1012 41.6
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 5.8e-176 622.5 1007 42.3
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 2.2e-175 620.5 1033 42.5
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 2.7e-173 613.6 1008 41.9
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 6.0e-173 612.5 1026 40.3
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.0e-172 609.4 1014 41.6
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 7.3e-171 605.5 1011 41.5
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.2e-170 604.7 1008 41.7
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.7e-170 602.8 1011 41.2
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 7.5e-168 595.5 785 46.1
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 5.2e-161 572.8 1021 39.3
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.1e-158 565.1 1010 38.7
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.1e-158 565.1 1010 39.1
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.6e-157 559.7 999 39.7
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 6.0e-157 559.3 1033 37.9
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 6.0e-157 559.3 1004 39.3
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 1.3e-156 558.1 1090 37.7
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 8.6e-156 555.4 1027 37.9
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 1.2e-154 551.6 897 42.5
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 8.1e-154 548.9 1053 37.4
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 1.4e-153 548.1 998 39.0
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 1.8e-153 547.7 1004 38.4
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 2.0e-152 544.3 1024 39.0
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 7.6e-152 542.3 1053 37.3
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 4.6e-149 533.1 1023 39.0
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 1.1e-147 528.5 1012 37.7
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 9.6e-147 525.4 1048 38.7
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 1.3e-146 525.0 1035 36.1
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 9.0e-145 518.8 1014 38.5
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 1.5e-144 518.1 1014 37.3
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 2.0e-144 517.7 973 38.0
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.9e-143 513.1 826 41.5
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 7.1e-142 509.2 877 40.5
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 1.6e-141 508.1 1033 36.6
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 1.6e-141 508.1 878 41.1
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 1.9e-139 501.1 1011 35.8
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 1.9e-139 501.1 1023 36.5
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 9.6e-139 498.8 1030 36.8
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 2.4e-137 494.2 1026 36.5
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 3.4e-136 490.3 1022 35.9
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 4.5e-136 490.0 1008 35.9
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 6.0e-133 479.6 1021 35.3
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 2.3e-132 477.6 1006 34.9
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 3.9e-132 476.9 1031 35.6
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 3.7e-130 470.3 1019 35.1
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 8.1e-130 469.2 1019 35.7
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 1.8e-129 468.0 1003 34.4
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 1.8e-129 468.0 1003 34.4
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 4.0e-129 466.8 980 36.1
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 5.3e-129 466.5 1017 35.0
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 8.4e-127 459.1 1019 35.4
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 8.4e-127 459.1 1017 36.1
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 1.9e-126 458.0 1027 35.2
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 5.5e-126 456.4 1009 35.1
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 7.1e-126 456.1 1014 36.0
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 1.2e-125 455.3 1008 34.8
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 2.7e-125 454.1 1018 35.9
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 2.7e-125 454.1 1026 35.3
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 7.9e-125 452.6 1022 34.2
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 1.8e-124 451.4 1014 34.3
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 6.7e-124 449.5 1021 33.7
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 8.7e-124 449.1 1014 34.2
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 1.9e-123 448.0 1019 34.3
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 1.9e-123 448.0 1022 33.6
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 3.3e-123 447.2 1010 34.9
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 2.8e-122 444.1 1017 34.8
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 8.2e-122 442.6 1008 35.3
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 1.2e-120 438.7 1025 34.0
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 9.3e-118 429.1 1008 35.0
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.2e-117 428.7 1008 34.9
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 3.9e-116 423.7 1021 34.5
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 8.7e-116 422.5 1017 34.4
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 5.7e-115 419.9 1019 34.3
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 2.8e-114 417.5 896 35.4
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 5.5e-110 403.3 1029 33.0
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 4.6e-109 400.2 968 31.9
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 5.0e-103 380.2 1019 32.7
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 4.2e-102 377.1 903 33.2
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 2.8e-98 364.4 895 33.9
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 2.8e-98 364.4 978 33.4
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 7.7e-96 356.3 677 38.8
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 6.1e-93 346.7 1013 31.5
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 3.0e-92 344.4 1050 30.9
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 3.8e-87 327.4 1030 28.5
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 6.5e-87 326.6 1005 30.5
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.8e-84 318.5 917 31.6
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 5.5e-78 297.0 474 41.6
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 4.7e-77 293.9 631 34.4
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 2.8e-74 284.6 605 37.2
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 5.9e-72 276.9 1089 27.3
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 1.8e-68 265.4 612 31.9
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 2.2e-66 258.5 567 34.9
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 2.2e-66 258.5 969 27.6
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 1.8e-60 238.8 389 41.6
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.6e-56 225.7 565 34.0
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 3.5e-56 224.6 398 39.4
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 2.3e-55 221.9 387 38.8
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 1.1e-54 219.5 992 26.7
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 4.0e-52 211.1 258 51.9
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 5.2e-52 210.7 346 39.3
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 8.9e-52 209.9 304 41.4
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 2.5e-46 191.8 483 33.5
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 5.2e-36 157.5 842 24.9
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 2.6e-35 155.2 372 32.8
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 2.8e-29 135.2 249 41.8
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 3.6e-29 134.8 312 36.2
MBI16_g03132_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 2.4e-17 95.5 190 40.0
Pp3c15_13500 Physcomitrium patens HOM05D005720 ORTHO05D006984 1.7e-10 72.8 137 34.3
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 4.9e-10 71.2 164 35.4
RcHm_v2.0_Chr1g0379741 Rosa chinensis HOM05D005720 ORTHO05D006984 7.1e-09 67.4 80 51.2
Lju188P3T29 Lonicera japonica HOM05D005720 ORTHO05D006984 3.9e-07 61.6 94 44.7
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 2.5e-06 58.9 1170 19.8


User provided reference genes

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