Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4791 Papaver somniferum HOM05D004037 ORTHO05D004744 7.2e-201 703.7 365 100.0
PSO339G4618 Papaver somniferum HOM05D004037 ORTHO05D004744 1.2e-187 659.8 369 94.0
PSO675G6334 Papaver somniferum HOM05D004037 ORTHO05D004744 3.5e-147 525.4 367 76.3
PSO541G3258 Papaver somniferum HOM05D004037 ORTHO05D004744 8.6e-146 520.8 366 76.0
Nn3g17600 Nelumbo nucifera HOM05D004037 ORTHO05D004744 8.7e-122 441.0 294 73.5
TAR636G3090 Trochodendron aralioides HOM05D004037 ORTHO05D004744 3.3e-121 439.1 315 71.4
Duzib093G0613 Durio zibethinus HOM05D004037 ORTHO05D004744 3.6e-120 435.6 279 75.6
Aqoxy2G03110 Aquilegia oxysepala HOM05D004037 ORTHO05D004744 9.0e-119 431.0 284 73.6
COL.COLO4_19183 Corchorus olitorius HOM05D004037 ORTHO05D004744 1.5e-118 430.3 300 71.3
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla HOM05D004037 ORTHO05D004744 1.5e-118 430.3 280 75.7
Thecc.01G117800 Theobroma cacao HOM05D004037 ORTHO05D004744 2.0e-118 429.9 294 71.8
Gorai.007G347100 Gossypium raimondii HOM05D004037 ORTHO05D004744 3.4e-118 429.1 285 73.3
MBI18_g24142_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 5.8e-118 428.3 284 73.2
Gohir.A11G301700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 2.2e-117 426.4 279 74.2
Actinidia39245 Actinidia chinensis HOM05D004037 ORTHO05D004744 2.9e-117 426.0 333 66.1
Lsat_1_v5_gn_3_17660 Lactuca sativa HOM05D004037 ORTHO05D004744 4.9e-117 425.2 325 65.5
RcHm_v2.0_Chr2g0084421 Rosa chinensis HOM05D004037 ORTHO05D004744 6.4e-117 424.9 330 67.3
MD15G1142500 Malus domestica HOM05D004037 ORTHO05D004744 1.1e-116 424.1 303 70.6
Manes.05G207900 Manihot esculenta HOM05D004037 ORTHO05D004744 1.1e-116 424.1 318 67.6
GSVIVG01038260001 Vitis vinifera HOM05D004037 ORTHO05D004744 1.1e-116 424.1 284 74.3
TWI34G0723 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 1.4e-116 423.7 304 70.4
CiPaw.01G202600 Carya illinoinensis HOM05D004037 ORTHO05D004744 1.9e-116 423.3 324 66.0
HanXRQChr02g0032821 Helianthus annuus HOM05D004037 ORTHO05D004744 3.2e-116 422.5 309 68.3
Gohir.A07G173900 Gossypium hirsutum HOM05D004037 ORTHO05D004744 4.2e-116 422.2 307 68.7
Ah.06g182910 Amaranthus hybridus HOM05D004037 ORTHO05D004744 5.4e-116 421.8 286 70.6
Cc03_g11000 Coffea canephora HOM05D004037 ORTHO05D004744 5.4e-116 421.8 284 74.3
Prupe.7G270700 Prunus persica HOM05D004037 ORTHO05D004744 5.4e-116 421.8 284 73.6
TWI63G1426 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 7.1e-116 421.4 301 70.8
Sed0007542 Sechium edule HOM05D004037 ORTHO05D004744 9.3e-116 421.0 282 72.7
Gorai.001G202100 Gossypium raimondii HOM05D004037 ORTHO05D004744 1.2e-115 420.6 371 60.4
ClCG09G010780 Citrullus lanatus HOM05D004037 ORTHO05D004744 1.6e-115 420.2 325 65.5
vmacro05805 Vaccinium macrocarpon HOM05D004037 ORTHO05D004744 1.6e-115 420.2 272 77.2
Gohir.D07G181200 Gossypium hirsutum HOM05D004037 ORTHO05D004744 2.1e-115 419.9 334 64.7
Thecc.05G172500 Theobroma cacao HOM05D004037 ORTHO05D004744 2.1e-115 419.9 343 65.0
QL10p064641 Quercus lobata HOM05D004037 ORTHO05D004744 2.7e-115 419.5 331 66.8
Atru.chr12.1746 Acer truncatum HOM05D004037 ORTHO05D004744 4.6e-115 418.7 324 67.0
Gohir.D11G316700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 4.6e-115 418.7 280 72.9
MELO3C013171.2 Cucumis melo HOM05D004037 ORTHO05D004744 6.0e-115 418.3 295 70.5
Duzib128G0968 Durio zibethinus HOM05D004037 ORTHO05D004744 6.0e-115 418.3 301 69.8
CsaV3_7G021780 Cucumis sativus L. HOM05D004037 ORTHO05D004744 7.9e-115 417.9 295 70.5
Prupe.6G152500 Prunus persica HOM05D004037 ORTHO05D004744 1.0e-114 417.5 318 67.6
QL10p065764 Quercus lobata HOM05D004037 ORTHO05D004744 1.0e-114 417.5 331 66.2
A03p24640 Brassica napus HOM05D004037 ORTHO05D004744 1.3e-114 417.2 274 73.0
BraA03t11670Z Brassica rapa HOM05D004037 ORTHO05D004744 1.3e-114 417.2 274 73.0
ECA246G0926 Erigeron canadensis HOM05D004037 ORTHO05D004744 1.7e-114 416.8 324 65.1
Ah.04g165670 Amaranthus hybridus HOM05D004037 ORTHO05D004744 2.3e-114 416.4 315 64.8
Ciclev10020914m.g Citrus clementina HOM05D004037 ORTHO05D004744 2.3e-114 416.4 365 62.2
Sc06g0007930 Simmondsia chinensis HOM05D004037 ORTHO05D004744 2.3e-114 416.4 292 69.9
BcaB01g03335 Brassica carinata HOM05D004037 ORTHO05D004744 3.0e-114 416.0 274 72.3
CANSAT01G0494 Cannabis sativa HOM05D004037 ORTHO05D004744 3.0e-114 416.0 317 68.1
Sp4g26120 Schrenkiella parvula HOM05D004037 ORTHO05D004744 3.0e-114 416.0 293 69.3
THA.LOC104804380 Tarenaya hassleriana HOM05D004037 ORTHO05D004744 3.0e-114 416.0 302 68.2
C03p29380 Brassica napus HOM05D004037 ORTHO05D004744 3.9e-114 415.6 274 72.6
BolC3t15285H Brassica oleracea HOM05D004037 ORTHO05D004744 3.9e-114 415.6 274 72.6
CARHR139200 Cardamine hirsuta HOM05D004037 ORTHO05D004744 5.1e-114 415.2 274 72.6
VMungo1383G1316 Vigna mungo HOM05D004037 ORTHO05D004744 5.1e-114 415.2 319 65.8
EL10Ac2g02395 Beta vulgaris HOM05D004037 ORTHO05D004744 8.7e-114 414.5 293 68.6
BolC4t28586H Brassica oleracea HOM05D004037 ORTHO05D004744 8.7e-114 414.5 274 72.3
AT2G44040 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 1.1e-113 414.1 274 72.3
Carub.0004s2659 Capsella rubella HOM05D004037 ORTHO05D004744 1.1e-113 414.1 274 71.9
PGSC0003DMG400028592 Solanum tuberosum HOM05D004037 ORTHO05D004744 1.1e-113 414.1 296 69.3
Aa31LG10G14130 Aethionema arabicum HOM05D004037 ORTHO05D004744 1.5e-113 413.7 274 72.6
BraA04t18775Z Brassica rapa HOM05D004037 ORTHO05D004744 1.5e-113 413.7 324 64.5
CDE02G2837 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 1.5e-113 413.7 276 73.2
AUR62016240 Chenopodium quinoa HOM05D004037 ORTHO05D004744 1.5e-113 413.7 293 67.9
BcaC01g05190 Brassica carinata HOM05D004037 ORTHO05D004744 1.9e-113 413.3 274 72.3
Thhalv10006083m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 1.9e-113 413.3 274 72.6
AL4G42910 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 2.5e-113 412.9 274 71.9
AT3G59890 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 2.5e-113 412.9 274 72.3
C04p70860 Brassica napus HOM05D004037 ORTHO05D004744 4.3e-113 412.1 274 71.9
Nitab4.5_0000245g0260 Nicotiana tabacum HOM05D004037 ORTHO05D004744 4.3e-113 412.1 339 63.7
Phvul.001G003100 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 4.3e-113 412.1 308 66.2
Actinidia14627 Actinidia chinensis HOM05D004037 ORTHO05D004744 5.6e-113 411.8 324 66.7
FvH4_2g00280 Fragaria vesca HOM05D004037 ORTHO05D004744 5.6e-113 411.8 331 64.7
DCAR_002599 Daucus carota HOM05D004037 ORTHO05D004744 7.3e-113 411.4 310 64.8
Sed0020358 Sechium edule HOM05D004037 ORTHO05D004744 7.3e-113 411.4 325 64.3
Ca_23565_v3 Cicer arietinum L. HOM05D004037 ORTHO05D004744 9.6e-113 411.0 282 70.2
Lju470A2T32 Lonicera japonica HOM05D004037 ORTHO05D004744 1.3e-112 410.6 340 64.7
TPR.G5068 Trifolium pratense HOM05D004037 ORTHO05D004744 2.1e-112 409.8 284 69.7
HPP92_022643 Vanilla planifolia HOM05D004037 ORTHO05D004744 2.8e-112 409.5 296 66.9
Oeu016121.2 Olea europaea HOM05D004037 ORTHO05D004744 3.6e-112 409.1 274 73.0
RcHm_v2.0_Chr2g0126841 Rosa chinensis HOM05D004037 ORTHO05D004744 3.6e-112 409.1 334 64.7
Solyc01g098380.4 Solanum lycopersicum HOM05D004037 ORTHO05D004744 3.6e-112 409.1 296 68.2
EL10Ac6g13735 Beta vulgaris HOM05D004037 ORTHO05D004744 6.2e-112 408.3 274 71.5
CARHR170220 Cardamine hirsuta HOM05D004037 ORTHO05D004744 6.2e-112 408.3 294 67.7
Gohir.D11G317300 Gossypium hirsutum HOM05D004037 ORTHO05D004744 6.2e-112 408.3 316 66.8
AL5G42050 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 8.1e-112 407.9 336 62.5
CAN.G134.227 Capsicum annuum HOM05D004037 ORTHO05D004744 8.1e-112 407.9 297 69.0
AUR62032781 Chenopodium quinoa HOM05D004037 ORTHO05D004744 8.1e-112 407.9 291 67.4
FAN19G0379 Fragaria x ananassa HOM05D004037 ORTHO05D004744 1.1e-111 407.5 329 66.0
A04p33160 Brassica napus HOM05D004037 ORTHO05D004744 1.4e-111 407.1 322 64.0
Medtr8g028145 Medicago truncatula HOM05D004037 ORTHO05D004744 1.4e-111 407.1 334 62.6
CSS0028639 Camellia sinensis var. sinensis HOM05D004037 ORTHO05D004744 1.8e-111 406.8 285 68.8
Lj3g0014190 Lotus japonicus HOM05D004037 ORTHO05D004744 1.8e-111 406.8 282 70.6
Carub.0005s2663 Capsella rubella HOM05D004037 ORTHO05D004744 2.4e-111 406.4 323 64.4
Glyma.16G028900 Glycine max HOM05D004037 ORTHO05D004744 2.4e-111 406.4 344 61.3
Aa31LG1G25710 Aethionema arabicum HOM05D004037 ORTHO05D004744 3.1e-111 406.0 274 71.5
FAN24G1991 Fragaria x ananassa HOM05D004037 ORTHO05D004744 4.0e-111 405.6 272 73.9
Hund23277 Selenicereus undatus HOM05D004037 ORTHO05D004744 4.0e-111 405.6 337 61.1
Hund02101 Selenicereus undatus HOM05D004037 ORTHO05D004744 5.3e-111 405.2 285 69.1
CDE05G0441 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 6.9e-111 404.8 276 71.4
Phvul.010G108900 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 9.0e-111 404.4 324 63.0
BcaB06g29352 Brassica carinata HOM05D004037 ORTHO05D004744 1.2e-110 404.1 269 72.1
Thhalv10001534m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 1.2e-110 404.1 334 62.0
Lalb_Chr10g0100171 Lupinus albus HOM05D004037 ORTHO05D004744 2.0e-110 403.3 334 62.3
Psat4g089800 Pisum sativum HOM05D004037 ORTHO05D004744 2.0e-110 403.3 282 69.9
Glyma.07G060300 Glycine max HOM05D004037 ORTHO05D004744 5.8e-110 401.7 308 65.3
Haze_11114 Corylus avellana HOM05D004037 ORTHO05D004744 6.4e-109 398.3 310 65.8
Potri.017G001900 Populus trichocarpa HOM05D004037 ORTHO05D004744 1.1e-108 397.5 280 70.0
Migut.M01184 Erythranthe guttata HOM05D004037 ORTHO05D004744 1.4e-108 397.1 332 61.1
arahy.Tifrunner.gnm1.ann1.FPGW6Q Arachis hypogaea HOM05D004037 ORTHO05D004744 2.4e-108 396.4 365 57.5
MSTRG.7308 Avicennia marina HOM05D004037 ORTHO05D004744 2.4e-108 396.4 304 66.4
Migut.M00539 Erythranthe guttata HOM05D004037 ORTHO05D004744 4.2e-108 395.6 280 68.2
PGR042G3458 Punica granatum HOM05D004037 ORTHO05D004744 4.2e-108 395.6 310 64.2
arahy.Tifrunner.gnm1.ann1.X3ZCQR Arachis hypogaea HOM05D004037 ORTHO05D004744 5.4e-108 395.2 365 57.5
Peaxi162Scf00071g00719 Petunia axillaris HOM05D004037 ORTHO05D004744 2.1e-107 393.3 265 72.5
ATR0743G110 Amborella trichopoda HOM05D004037 ORTHO05D004744 4.6e-107 392.1 283 67.1
AUR62028616 Chenopodium quinoa HOM05D004037 ORTHO05D004744 3.9e-106 389.0 284 65.8
Os02g0436400 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 1.9e-105 386.7 292 66.4
Os03g0245100 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 4.3e-105 385.6 277 66.1
AUR62032340 Chenopodium quinoa HOM05D004037 ORTHO05D004744 2.1e-104 383.3 263 69.2
Potri.007G145900 Populus trichocarpa HOM05D004037 ORTHO05D004744 4.8e-104 382.1 282 66.7
Zm00001eb176170 Zea mays HOM05D004037 ORTHO05D004744 4.8e-104 382.1 278 67.3
BcaC02g07140 Brassica carinata HOM05D004037 ORTHO05D004744 8.1e-104 381.3 274 68.6
Lj6C283G4 Lonicera japonica HOM05D004037 ORTHO05D004744 2.2e-101 373.2 347 59.9
BcaB06g29511 Brassica carinata HOM05D004037 ORTHO05D004744 4.9e-101 372.1 265 69.8
Cpa.g.sc182.24 Carica papaya HOM05D004037 ORTHO05D004744 1.1e-100 370.9 304 62.2
HanXRQChr05g0133541 Helianthus annuus HOM05D004037 ORTHO05D004744 1.4e-100 370.5 298 63.1
unitig_37.g12156 Utricularia gibba HOM05D004037 ORTHO05D004744 1.2e-99 367.5 253 69.2
Oeu050828.1 Olea europaea HOM05D004037 ORTHO05D004744 2.1e-99 366.7 306 62.1
Sabra17G0005900 Salix brachista HOM05D004037 ORTHO05D004744 6.0e-99 365.2 326 58.3
SEGI_29918 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 1.9e-97 360.1 326 57.1
Nn048s41912 Nelumbo nucifera HOM05D004037 ORTHO05D004744 5.7e-97 358.6 258 69.4
SGA_v2.0_scaffold22G09788 Striga asiatica HOM05D004037 ORTHO05D004744 9.6e-97 357.8 305 61.3
SalBow8G4021 Salvia bowleyana HOM05D004037 ORTHO05D004744 1.3e-96 357.5 301 62.1
Cfa008527 Carpinus fangiana HOM05D004037 ORTHO05D004744 4.8e-96 355.5 310 59.4
Sopen01g041950 Solanum pennellii HOM05D004037 ORTHO05D004744 2.8e-88 329.7 244 66.8
SMO347G0499 Selaginella moellendorffii HOM05D004037 ORTHO05D004744 1.1e-87 327.8 277 56.3
Pp3c15_7380 Physcomitrium patens HOM05D004037 ORTHO05D004744 2.5e-84 316.6 274 56.9
CBR_g41668 Chara braunii HOM05D004037 ORTHO05D004744 1.4e-82 310.8 309 48.9
Peaxi162Scf00434g00730 Petunia axillaris HOM05D004037 ORTHO05D004744 5.1e-82 308.9 186 80.1
Mapoly0033s0134 Marchantia polymorpha HOM05D004037 ORTHO05D004744 4.7e-75 285.8 282 54.3
Dinv24475 Davidia involucrata HOM05D004037 ORTHO05D004744 7.9e-75 285.0 275 56.7
Cre14.g627850 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 2.4e-71 273.5 276 48.9
Nitab4.5_0001165g0010 Nicotiana tabacum HOM05D004037 ORTHO05D004744 4.1e-71 272.7 250 59.2
PRCOL_00006631 Prasinoderma coloniale HOM05D004037 ORTHO05D004744 5.3e-71 272.3 274 48.9
MCO16G413 Micromonas commoda HOM05D004037 ORTHO05D004744 1.1e-68 264.6 289 50.9
FAN20G0369 Fragaria x ananassa HOM05D004037 ORTHO05D004744 1.2e-67 261.2 234 62.4
Peaxi162Scf00434g00733 Petunia axillaris HOM05D004037 ORTHO05D004744 7.2e-60 235.3 216 60.2
Peaxi162Scf00434g00740 Petunia axillaris HOM05D004037 ORTHO05D004744 9.4e-60 235.0 174 70.1
Gohir.D09G124433 Gossypium hirsutum HOM05D004037 ORTHO05D004744 8.8e-58 228.4 238 55.9
Actinidia11426 Actinidia chinensis HOM05D004037 ORTHO05D004744 3.1e-55 219.9 292 45.5
Nn048s41913 Nelumbo nucifera HOM05D004037 ORTHO05D004744 5.5e-52 209.1 123 78.9
Gorai.006G143300 Gossypium raimondii HOM05D004037 ORTHO05D004744 1.2e-51 208.0 220 54.5
BcaB01g03344 Brassica carinata HOM05D004037 ORTHO05D004744 4.4e-49 199.5 249 51.0
Zm00001eb398800 Zea mays HOM05D004037 ORTHO05D004744 4.4e-49 199.5 161 59.6
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 1.5e-44 184.5 168 57.7
AagrBONN_evm.TU.Sc2ySwM_368.1842 Anthoceros agrestis HOM05D004037 ORTHO05D004744 2.7e-38 163.7 185 49.7
AagrBONN_evm.TU.Sc2ySwM_368.1728 Anthoceros agrestis HOM05D004037 ORTHO05D004744 4.7e-35 152.9 138 58.7
FvH4_2g00640 Fragaria vesca HOM05D004037 ORTHO05D004744 1.8e-34 151.0 90 80.0
PSO451G0001 Papaver somniferum HOM05D004037 ORTHO05D004744 6.4e-32 142.5 77 87.0
Cre16.g656300 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 2.8e-27 127.1 278 30.9
RhsimUnG0159300 Rhododendron simsii HOM05D004037 ORTHO05D004744 2.3e-26 124.0 149 50.3
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 7.8e-22 109.0 65 83.1
MBI01_g38182_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 1.7e-21 107.8 71 73.2
AagrBONN_evm.TU.Sc2ySwM_152.2 Anthoceros agrestis HOM05D004037 ORTHO05D004744 9.5e-20 102.1 164 40.9
MD02G1000400 Malus domestica HOM05D004037 ORTHO05D004744 1.6e-19 101.3 89 62.9
ATR0716G071 Amborella trichopoda HOM05D004037 ORTHO05D004744 2.0e-17 94.4 66 71.2
AagrBONN_evm.TU.Sc2ySwM_344.5552 Anthoceros agrestis HOM05D004037 ORTHO05D004744 5.4e-15 86.3 83 55.4
SEGI_36179 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 6.4e-08 62.8 178 28.1
CAN.G1019.1 Capsicum annuum HOM05D004037 ORTHO05D004744 1.2e-06 58.5 59 47.5
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.6e-06 58.2 92 38.0


User provided reference genes

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