Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 8.1e-138 493.8 261 100.0
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 7.6e-128 460.7 254 97.2
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 7.2e-46 188.3 262 48.5
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 4.7e-45 185.7 262 48.1
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 2.7e-40 169.9 265 44.9
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 1.7e-39 167.2 250 47.6
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 7.3e-38 161.8 257 44.0
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 7.3e-38 161.8 266 45.1
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 9.5e-38 161.4 182 56.6
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 1.2e-37 161.0 260 47.3
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 2.3e-36 156.8 297 43.1
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 1.2e-35 154.5 257 44.0
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 2.0e-35 153.7 198 49.0
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 3.4e-35 152.9 265 43.4
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 5.7e-35 152.1 196 48.5
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 5.7e-35 152.1 275 42.2
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 5.7e-35 152.1 266 44.7
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 2.2e-34 150.2 259 46.7
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 2.9e-34 149.8 270 44.8
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 3.7e-34 149.4 256 44.9
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 4.9e-34 149.1 294 40.5
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 8.3e-34 148.3 291 41.2
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 1.8e-33 147.1 179 51.4
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 4.1e-33 146.0 266 42.9
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 7.0e-33 145.2 273 42.5
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 1.2e-32 144.4 148 56.1
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.2e-32 144.4 272 43.0
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 1.6e-32 144.1 254 40.2
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 1.6e-32 144.1 254 40.9
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 2.7e-32 143.3 170 51.2
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 2.7e-32 143.3 253 43.1
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 5.9e-32 142.1 135 56.3
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 5.9e-32 142.1 272 42.6
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 5.9e-32 142.1 281 39.5
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 5.9e-32 142.1 297 38.7
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 1.0e-31 141.4 285 40.4
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 1.0e-31 141.4 280 40.7
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 1.0e-31 141.4 254 39.8
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 1.7e-31 140.6 134 56.7
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 5.0e-31 139.0 111 64.9
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 6.6e-31 138.7 131 58.0
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 8.6e-31 138.3 267 41.9
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 1.5e-30 137.5 225 43.6
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 1.9e-30 137.1 108 64.8
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 1.9e-30 137.1 193 47.7
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 2.5e-30 136.7 171 46.8
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 3.3e-30 136.3 235 43.8
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 3.3e-30 136.3 206 46.6
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 4.3e-30 136.0 135 54.8
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 5.6e-30 135.6 210 45.2
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 7.3e-30 135.2 132 58.3
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 9.5e-30 134.8 130 59.2
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 1.2e-29 134.4 256 39.5
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 1.2e-29 134.4 102 67.6
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.2e-29 134.4 210 42.9
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 2.8e-29 133.3 130 55.4
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 3.6e-29 132.9 251 43.4
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 3.6e-29 132.9 232 42.2
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 4.7e-29 132.5 161 50.9
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 6.2e-29 132.1 202 45.0
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 1.0e-28 131.3 176 47.7
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 1.0e-28 131.3 180 45.6
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 2.3e-28 130.2 260 40.0
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.1e-28 129.8 116 56.0
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 5.2e-28 129.0 280 36.8
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 8.9e-28 128.3 197 45.2
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 1.5e-27 127.5 251 41.4
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 2.6e-27 126.7 115 58.3
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 2.6e-27 126.7 200 46.0
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 4.4e-27 125.9 147 51.7
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 7.5e-27 125.2 146 53.4
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 7.5e-27 125.2 220 41.4
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 1.3e-26 124.4 139 52.5
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 8.3e-26 121.7 251 38.2
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 4.1e-25 119.4 204 41.7
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 4.1e-25 119.4 117 54.7
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 4.1e-25 119.4 204 41.7
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 4.1e-25 119.4 155 48.4
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 1.2e-24 117.9 156 49.4
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 1.2e-24 117.9 203 41.4
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 1.2e-24 117.9 203 41.4
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 2.0e-24 117.1 201 42.8
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 2.7e-24 116.7 110 53.6
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 7.8e-24 115.2 203 41.9
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 1.3e-23 114.4 121 52.1
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 2.3e-23 113.6 212 41.0
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 5.0e-23 112.5 219 40.2
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 6.6e-23 112.1 201 40.8
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 2.5e-22 110.2 203 43.3
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 2.5e-22 110.2 202 40.6
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 1.2e-21 107.8 201 39.3
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 1.6e-21 107.5 176 42.0
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 2.0e-19 100.5 150 42.7
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 1.4e-17 94.4 142 44.4
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 2.1e-16 90.5 154 42.2
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 1.7e-15 87.4 72 62.5
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 1.7e-15 87.4 72 62.5
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 5.1e-15 85.9 72 61.1
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 1.5e-14 84.3 72 61.1
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 6.8e-12 75.5 67 55.2
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 8.9e-12 75.1 83 51.8
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 2.0e-11 73.9 83 47.0
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 2.0e-11 73.9 136 38.2
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 3.4e-11 73.2 82 51.2
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 5.8e-11 72.4 73 50.7
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 2.4e-09 67.0 73 47.9
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 5.4e-09 65.9 113 33.6
AUR62044089 Chenopodium quinoa HOM05D005782 ORTHO05D007436 4.6e-08 62.8 140 35.0
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 1.3e-07 61.2 67 50.7
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 1.7e-07 60.8 43 72.1
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 3.0e-07 60.1 115 33.0
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 3.9e-07 59.7 266 27.8
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 4.3e-06 56.2 83 42.2


User provided reference genes

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