Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.0e-108 396.7 202 100.0
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.6e-85 319.7 204 85.3
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 3.0e-55 219.2 195 62.6
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 4.0e-52 208.8 203 59.1
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 5.2e-52 208.4 170 64.1
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.2e-51 207.2 148 70.9
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 7.6e-51 204.5 185 63.2
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 7.6e-51 204.5 185 63.2
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 9.9e-51 204.1 175 64.0
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 9.9e-51 204.1 162 67.9
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.7e-50 203.4 162 69.1
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 1.7e-50 203.4 162 67.3
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 4.9e-50 201.8 150 70.0
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 6.4e-50 201.4 206 56.8
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.4e-49 200.3 143 70.6
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.4e-49 200.3 140 73.6
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.9e-49 199.9 157 68.2
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.9e-49 199.9 147 72.1
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 2.4e-49 199.5 141 70.2
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 5.4e-49 198.4 202 56.4
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 7.1e-49 198.0 155 64.5
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 7.1e-49 198.0 170 63.5
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 9.2e-49 197.6 142 72.5
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 1.2e-48 197.2 159 63.5
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 3.5e-48 195.7 205 58.0
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 6.0e-48 194.9 172 62.2
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 6.0e-48 194.9 198 58.6
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 7.8e-48 194.5 126 75.4
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.0e-47 194.1 183 58.5
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.3e-47 193.7 162 61.1
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.3e-47 193.7 161 65.8
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 2.3e-47 193.0 139 70.5
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 3.9e-47 192.2 147 68.0
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 5.1e-47 191.8 146 63.0
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 5.1e-47 191.8 139 69.1
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 5.1e-47 191.8 204 54.9
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.5e-46 190.3 146 67.1
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.9e-46 189.9 191 57.6
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.9e-46 189.9 168 63.1
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.9e-46 189.9 157 65.6
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 2.5e-46 189.5 138 65.9
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 4.3e-46 188.7 142 68.3
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 7.3e-46 188.0 147 66.7
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.6e-45 186.8 160 63.1
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.1e-45 186.4 179 57.5
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 4.7e-45 185.3 187 56.7
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 4.7e-45 185.3 189 54.0
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 4.7e-45 185.3 115 80.0
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 6.2e-45 184.9 126 69.8
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.4e-44 183.0 202 52.5
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.4e-44 183.0 162 59.9
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.4e-44 183.0 184 56.0
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 8.9e-44 181.0 184 56.0
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 1.2e-43 180.6 125 69.6
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 1.2e-43 180.6 137 67.9
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.2e-43 180.6 125 69.6
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 1.5e-43 180.3 126 70.6
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 1.5e-43 180.3 127 70.1
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 3.4e-43 179.1 126 69.0
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 3.4e-43 179.1 124 71.0
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 3.4e-43 179.1 209 50.2
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 3.4e-43 179.1 124 71.0
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 3.4e-43 179.1 125 69.6
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 3.4e-43 179.1 125 69.6
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 4.4e-43 178.7 127 70.9
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 5.8e-43 178.3 182 52.7
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 7.6e-43 177.9 159 59.1
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 9.9e-43 177.6 124 68.5
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.3e-42 177.2 178 55.6
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 2.9e-42 176.0 187 54.5
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 6.4e-42 174.9 193 52.3
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 6.4e-42 174.9 129 69.8
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 8.4e-42 174.5 127 69.3
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.1e-41 174.1 171 56.1
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 1.4e-41 173.7 171 56.7
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.4e-41 173.7 187 53.5
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 4.2e-41 172.2 162 57.4
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 7.1e-41 171.4 115 73.9
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 9.3e-41 171.0 122 71.3
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 2.7e-40 169.5 140 60.0
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 7.8e-40 167.9 215 49.8
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.9e-38 163.3 203 49.3
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 2.8e-37 159.5 131 63.4
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 3.6e-37 159.1 147 60.5
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 8.1e-37 157.9 149 54.4
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 1.1e-36 157.5 175 55.4
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 6.9e-36 154.8 125 66.4
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 1.1e-33 147.5 194 47.4
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 1.1e-33 147.5 194 47.4
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.4e-33 147.1 203 46.3
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 7.1e-33 144.8 202 46.0
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 3.0e-31 139.4 183 47.5
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 7.3e-30 134.8 128 54.7
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 1.4e-28 130.6 193 42.5
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 4.5e-27 125.6 123 50.4
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.1e-25 120.9 146 45.9
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.1e-24 116.7 88 67.0
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.1e-24 116.7 104 57.7
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 2.1e-24 116.7 82 68.3
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 4.6e-24 115.5 82 68.3
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 4.3e-22 109.0 343 28.3
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.7e-18 97.1 81 64.2
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.0e-10 71.2 53 66.0
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 8.4e-10 68.2 52 63.5
MCO16G381 Micromonas commoda HOM05D007282 ORTHO05D009214 3.9e-07 59.3 78 39.7
PRCOL_00001877 Prasinoderma coloniale HOM05D007282 ORTHO05D009214 1.9e-06 57.0 119 32.8


User provided reference genes

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