Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 1.2e-62 243.0 131 100.0
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 7.5e-60 233.8 131 95.4
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.3e-48 196.4 131 80.9
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.9e-48 194.9 131 80.2
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.1e-45 185.3 126 77.0
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 7.1e-42 174.1 131 71.8
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 2.1e-41 172.6 131 71.0
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 2.1e-41 172.6 128 71.9
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 4.6e-41 171.4 132 71.2
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 4.6e-41 171.4 129 72.1
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 6.0e-41 171.0 127 71.7
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 7.8e-41 170.6 124 75.0
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 7.8e-41 170.6 121 73.6
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.0e-40 170.2 129 71.3
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.7e-40 169.5 129 71.3
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 2.3e-40 169.1 127 70.1
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 2.3e-40 169.1 131 69.5
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.0e-40 168.7 126 73.8
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 3.0e-40 168.7 121 74.4
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.9e-40 168.3 126 74.6
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 3.9e-40 168.3 127 70.9
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 3.9e-40 168.3 130 70.0
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 5.1e-40 167.9 127 68.5
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 6.6e-40 167.5 121 72.7
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 8.7e-40 167.2 129 69.0
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 8.7e-40 167.2 129 69.0
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.1e-39 166.8 129 70.5
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 1.1e-39 166.8 129 69.8
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 1.5e-39 166.4 116 77.6
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 1.5e-39 166.4 118 74.6
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 4.3e-39 164.9 116 77.6
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 4.3e-39 164.9 121 74.4
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 4.3e-39 164.9 123 71.5
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 4.3e-39 164.9 116 75.9
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 7.3e-39 164.1 120 75.0
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 7.3e-39 164.1 124 71.8
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 9.6e-39 163.7 116 75.9
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 9.6e-39 163.7 116 75.9
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 9.6e-39 163.7 116 75.9
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 9.6e-39 163.7 124 70.2
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 9.6e-39 163.7 114 75.4
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.3e-38 163.3 114 77.2
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.6e-38 162.9 127 67.7
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 2.1e-38 162.5 116 75.9
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 3.6e-38 161.8 114 77.2
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 3.6e-38 161.8 118 72.0
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 8.1e-38 160.6 116 74.1
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 8.1e-38 160.6 131 65.6
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.1e-37 160.2 121 70.2
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.1e-37 160.2 121 70.2
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.4e-37 159.8 116 73.3
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.4e-37 159.8 116 73.3
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 2.4e-37 159.1 121 70.2
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 2.4e-37 159.1 121 70.2
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 3.1e-37 158.7 121 69.4
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 4.0e-37 158.3 109 78.0
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 6.9e-37 157.5 125 70.4
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 9.0e-37 157.1 121 69.4
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 9.0e-37 157.1 120 72.5
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 9.0e-37 157.1 111 75.7
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.2e-36 156.8 113 74.3
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.5e-36 156.4 125 68.8
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 2.0e-36 156.0 124 69.4
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 2.0e-36 156.0 112 74.1
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 3.4e-36 155.2 116 73.3
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 4.4e-36 154.8 154 59.1
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 7.6e-36 154.1 123 69.9
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 1.7e-35 152.9 116 72.4
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.7e-35 152.9 114 71.1
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.7e-35 152.9 111 73.0
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.7e-35 152.9 111 73.0
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.7e-35 152.9 119 68.1
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 2.9e-35 152.1 147 60.5
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 2.9e-35 152.1 124 66.9
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 2.9e-35 152.1 124 66.9
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 2.9e-35 152.1 113 73.5
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.8e-35 151.8 113 73.5
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 6.4e-35 151.0 111 72.1
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.4e-35 151.0 109 73.4
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 8.4e-35 150.6 111 73.0
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.1e-34 150.2 112 75.0
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.1e-34 150.2 112 75.0
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.4e-34 149.8 111 72.1
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.6e-33 146.4 122 60.7
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 6.0e-33 144.4 115 67.8
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.0e-32 143.7 110 69.1
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 3.9e-32 141.7 118 69.5
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 3.9e-32 141.7 178 49.4
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 9.6e-31 137.1 102 72.5
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 2.8e-30 135.6 126 59.5
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.2e-28 130.2 134 60.4
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 1.3e-27 126.7 126 59.5
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 8.4e-27 124.0 112 58.9
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 3.2e-26 122.1 118 59.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.5e-25 118.6 114 61.4
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.0e-24 117.1 102 64.7
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 1.0e-24 117.1 88 70.5
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.8e-24 116.3 109 61.5
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 5.1e-24 114.8 108 63.0
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.3e-21 104.8 111 57.7
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 2.2e-19 99.4 74 68.9
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 8.7e-16 87.4 112 50.0
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 8.7e-16 87.4 119 46.2
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.3e-14 83.6 68 63.2
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 6.3e-14 81.3 107 37.4
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 2.4e-13 79.3 108 43.5
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 1.1e-10 70.5 51 74.5
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 2.2e-06 56.2 51 58.8


User provided reference genes

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