Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4516 Papaver somniferum HOM05D006281 ORTHO05D005138 5.6e-119 431.4 297 100.0
PSO339G3794 Papaver somniferum HOM05D006281 ORTHO05D005138 2.2e-99 366.3 393 72.3
PSO832G0699 Papaver somniferum HOM05D002788 ORTHO05D005138 5.4e-29 132.5 267 39.0
PSO339G5625 Papaver somniferum HOM05D006281 ORTHO05D005138 2.0e-28 130.6 300 39.3
PSO384G0199 Papaver somniferum HOM05D006281 ORTHO05D005138 2.5e-26 123.6 303 39.6
PSO013G0071 Papaver somniferum HOM05D002788 ORTHO05D005138 1.5e-15 87.8 78 62.8
ATR0618G177 Amborella trichopoda HOM05D006281 ORTHO05D005138 6.0e-12 75.9 70 55.7
SalBow3G2112 Salvia bowleyana HOM05D006281 ORTHO05D005138 6.0e-12 75.9 63 52.4
Lj5g0025792 Lotus japonicus HOM05D006281 ORTHO05D005138 7.8e-12 75.5 67 56.7
Lalb_Chr02g0148591 Lupinus albus HOM05D006281 ORTHO05D005138 7.8e-12 75.5 67 53.7
Glyma.10G159300 Glycine max HOM05D006281 ORTHO05D005138 1.3e-11 74.7 63 55.6
Sc07g0006300 Simmondsia chinensis HOM05D006281 ORTHO05D005138 1.3e-11 74.7 70 54.3
EL10Ac7g16532 Beta vulgaris HOM05D006281 ORTHO05D005138 1.7e-11 74.3 69 55.1
Manes.07G127600 Manihot esculenta HOM05D006281 ORTHO05D005138 1.7e-11 74.3 60 58.3
Glyma.20G229400 Glycine max HOM05D006281 ORTHO05D005138 3.9e-11 73.2 63 57.1
TAR633G0389 Trochodendron aralioides HOM05D006281 ORTHO05D005138 3.9e-11 73.2 75 50.7
MBI14_g22157_MAGBIO Magnolia biondii HOM05D006281 ORTHO05D005138 5.0e-11 72.8 60 58.3
Phvul.007G184700 Phaseolus vulgaris HOM05D006281 ORTHO05D005138 8.6e-11 72.0 70 54.3
Duzib114G0722 Durio zibethinus HOM05D006949 ORTHO05D008621 1.5e-10 71.2 70 51.4
vmacro06983 Vaccinium macrocarpon HOM05D006281 ORTHO05D005138 2.5e-10 70.5 62 53.2
MSTRG.8320 Avicennia marina HOM05D006281 ORTHO05D005138 3.3e-10 70.1 72 51.4
Dinv20972 Davidia involucrata HOM05D000895 ORTHO05D002393 3.3e-10 70.1 59 57.6
Dinv21033 Davidia involucrata HOM05D000895 ORTHO05D002393 3.3e-10 70.1 59 57.6
Potri.010G190800 Populus trichocarpa HOM05D006281 ORTHO05D005138 4.3e-10 69.7 60 55.0
TAR623G1110 Trochodendron aralioides HOM05D000895 ORTHO05D005138 5.6e-10 69.3 58 58.6
VMungo0720G2983 Vigna mungo HOM05D006281 ORTHO05D005138 5.6e-10 69.3 70 51.4
Nitab4.5_0005628g0040 Nicotiana tabacum HOM05D006281 ORTHO05D005138 7.3e-10 68.9 64 50.0
TPR.G2715 Trifolium pratense HOM05D006281 ORTHO05D005138 7.3e-10 68.9 71 49.3
Actinidia33937 Actinidia chinensis HOM05D006281 ORTHO05D005138 9.5e-10 68.6 75 42.7
CAN.G372.4 Capsicum annuum HOM05D006281 ORTHO05D005138 9.5e-10 68.6 64 48.4
Nn2g11433 Nelumbo nucifera HOM05D006281 ORTHO05D005138 9.5e-10 68.6 73 47.9
Nitab4.5_0000802g0100 Nicotiana tabacum HOM05D006281 ORTHO05D005138 9.5e-10 68.6 64 48.4
Cc02_g06760 Coffea canephora HOM05D006281 ORTHO05D005138 1.2e-09 68.2 58 58.6
Ca_10064_v3 Cicer arietinum L. HOM05D006281 ORTHO05D005138 1.6e-09 67.8 63 49.2
ClCG11G006260 Citrullus lanatus HOM05D006281 ORTHO05D005138 1.6e-09 67.8 69 49.3
Solyc06g030540.4 Solanum lycopersicum HOM05D006281 ORTHO05D005138 1.6e-09 67.8 64 50.0
Manes.10G014800 Manihot esculenta HOM05D006281 ORTHO05D005138 2.1e-09 67.4 65 55.4
Sopen06g008590 Solanum pennellii HOM05D006281 ORTHO05D005138 2.1e-09 67.4 64 50.0
Manes.10G015100 Manihot esculenta HOM05D006281 ORTHO05D005138 2.8e-09 67.0 63 52.4
QL11p005716 Quercus lobata HOM05D021521 ORTHO05D005138 2.8e-09 67.0 76 44.7
Medtr1g111700 Medicago truncatula HOM05D006281 ORTHO05D005138 3.6e-09 66.6 63 50.8
Nitab4.5_0000802g0130 Nicotiana tabacum HOM05D006281 ORTHO05D005138 3.6e-09 66.6 59 57.6
QL05p066700 Quercus lobata HOM05D006281 ORTHO05D005138 3.6e-09 66.6 80 46.2
Actinidia29689 Actinidia chinensis HOM05D006949 ORTHO05D008621 4.7e-09 66.2 75 41.3
Prupe.2G247900 Prunus persica HOM05D006281 ORTHO05D005138 4.7e-09 66.2 68 51.5
HanXRQChr12g0367471 Helianthus annuus HOM05D006281 ORTHO05D005138 6.2e-09 65.9 69 47.8
Nitab4.5_0005628g0020 Nicotiana tabacum HOM05D006281 ORTHO05D005138 6.2e-09 65.9 63 54.0
Psat6g147880 Pisum sativum HOM05D006281 ORTHO05D005138 6.2e-09 65.9 70 45.7
QL05p072246 Quercus lobata HOM05D021521 ORTHO05D005138 6.2e-09 65.9 76 44.7
CANSAT56G0859 Cannabis sativa HOM05D006281 ORTHO05D005138 1.1e-08 65.1 68 50.0
Nitab4.5_0005628g0030 Nicotiana tabacum HOM05D006281 ORTHO05D005138 1.1e-08 65.1 67 47.8
SalBow6G7137 Salvia bowleyana HOM05D006281 ORTHO05D005138 1.4e-08 64.7 71 49.3
AUR62043156 Chenopodium quinoa HOM05D006281 ORTHO05D005138 2.3e-08 63.9 80 48.8
CsaV3_6G001730 Cucumis sativus L. HOM05D006281 ORTHO05D005138 2.3e-08 63.9 74 44.6
Zm00001eb050100 Zea mays HOM05D006281 ORTHO05D005138 2.3e-08 63.9 63 50.8
arahy.Tifrunner.gnm1.ann1.0XLH38 Arachis hypogaea HOM05D006281 ORTHO05D005138 3.1e-08 63.5 71 50.7
Migut.F00696 Erythranthe guttata HOM05D006281 ORTHO05D005138 3.1e-08 63.5 75 45.3
Phvul.008G225200 Phaseolus vulgaris HOM05D006281 ORTHO05D005138 3.1e-08 63.5 67 50.7
CANSAT56G1147 Cannabis sativa HOM05D006281 ORTHO05D005138 4.0e-08 63.2 68 48.5
Medtr1g081780 Medicago truncatula HOM05D006281 ORTHO05D005138 4.0e-08 63.2 64 51.6
Sed0005546 Sechium edule HOM05D006281 ORTHO05D005138 4.0e-08 63.2 62 50.0
AUR62040493 Chenopodium quinoa HOM05D006281 ORTHO05D005138 6.8e-08 62.4 60 55.0
MELO3C029900.2 Cucumis melo HOM05D006281 ORTHO05D005138 6.8e-08 62.4 57 52.6
PGR142G2831 Punica granatum HOM05D006281 ORTHO05D005138 6.8e-08 62.4 63 50.8
Nitab4.5_0000802g0120 Nicotiana tabacum HOM05D006281 ORTHO05D005138 8.9e-08 62.0 78 43.6
arahy.Tifrunner.gnm1.ann1.ZTR0B0 Arachis hypogaea HOM05D006281 ORTHO05D005138 1.2e-07 61.6 71 50.7
Peaxi162Scf01313g00024 Petunia axillaris HOM05D006281 ORTHO05D005138 1.2e-07 61.6 70 48.6
VMungo0647G1369 Vigna mungo HOM05D006949 ORTHO05D008621 1.2e-07 61.6 65 49.2
COL.COLO4_25628 Corchorus olitorius HOM05D006281 ORTHO05D005138 1.5e-07 61.2 63 54.0
LjContig00357g0022557 Lotus japonicus HOM05D006281 ORTHO05D005138 1.5e-07 61.2 80 45.0
FvH4_2g13151 Fragaria vesca HOM05D006281 ORTHO05D005138 2.0e-07 60.8 69 43.5
FAN20G0701 Fragaria x ananassa HOM05D006281 ORTHO05D005138 2.0e-07 60.8 69 43.5
Glyma.02G255900 Glycine max HOM05D006281 ORTHO05D005138 2.0e-07 60.8 60 50.0
Haze_18961 Corylus avellana HOM05D006281 ORTHO05D005138 2.6e-07 60.5 67 46.3
Gorai.011G284000 Gossypium raimondii HOM05D006281 ORTHO05D005138 2.6e-07 60.5 62 51.6
Cc02_g06750 Coffea canephora HOM05D006281 ORTHO05D005138 3.4e-07 60.1 67 44.8
Gohir.A10G234000 Gossypium hirsutum HOM05D006281 ORTHO05D005138 3.4e-07 60.1 62 53.2
Medtr1g111690 Medicago truncatula HOM05D006281 ORTHO05D005138 3.4e-07 60.1 63 49.2
Atru.chr12.10 Acer truncatum HOM05D006281 ORTHO05D005138 4.4e-07 59.7 79 45.6
Peaxi162Scf01313g00025 Petunia axillaris HOM05D006281 ORTHO05D005138 4.4e-07 59.7 67 47.8
Medtr6g033440 Medicago truncatula HOM05D006281 ORTHO05D005138 5.8e-07 59.3 63 47.6
Medtr5g082250 Medicago truncatula HOM05D006281 ORTHO05D005138 7.5e-07 58.9 70 45.7
FAN15G2203 Fragaria x ananassa HOM05D006281 ORTHO05D005138 9.8e-07 58.5 69 42.0
QL08p063014 Quercus lobata HOM05D006281 ORTHO05D005138 9.8e-07 58.5 68 45.6
THA.LOC104824311 Tarenaya hassleriana HOM05D006281 ORTHO05D005138 9.8e-07 58.5 77 44.2
Psat0s288g0040 Pisum sativum HOM05D006281 ORTHO05D005138 1.3e-06 58.2 71 45.1
ECA233G1951 Erigeron canadensis HOM05D006281 ORTHO05D005138 1.7e-06 57.8 69 44.9
Lalb_Chr10g0105101 Lupinus albus HOM05D006281 ORTHO05D005138 2.2e-06 57.4 59 49.2
Oeu025174.1 Olea europaea HOM05D006281 ORTHO05D005138 2.2e-06 57.4 63 46.0
FvH4_7g24210 Fragaria vesca HOM05D006281 ORTHO05D005138 2.9e-06 57.0 65 44.6
Glyma.18G211600 Glycine max HOM05D006281 ORTHO05D005138 2.9e-06 57.0 64 46.9
RcHm_v2.0_Chr6g0274431 Rosa chinensis HOM05D006281 ORTHO05D005138 3.7e-06 56.6 46 50.0
TPR.G19854 Trifolium pratense HOM05D006281 ORTHO05D005138 3.7e-06 56.6 75 45.3
MD17G1067400 Malus domestica HOM05D006281 ORTHO05D005138 4.9e-06 56.2 66 45.5
FAN01G2469 Fragaria x ananassa HOM05D006281 ORTHO05D005138 6.4e-06 55.8 71 42.3
FAN06G1003 Fragaria x ananassa HOM05D006281 ORTHO05D005138 6.4e-06 55.8 71 42.3
Os09g0114700 Oryza sativa ssp. japonica HOM05D006281 ORTHO05D005138 6.4e-06 55.8 65 44.6
Sp4g22330 Schrenkiella parvula HOM05D010943 ORTHO05D005138 6.4e-06 55.8 70 52.9
Aqoxy3G02946 Aquilegia oxysepala HOM05D006281 ORTHO05D005138 8.3e-06 55.5 59 47.5
Glyma.06G220600 Glycine max HOM05D006281 ORTHO05D005138 8.3e-06 55.5 53 50.9
Gohir.D10G246300 Gossypium hirsutum HOM05D006281 ORTHO05D005138 8.3e-06 55.5 59 49.2
Thecc.10G022800 Theobroma cacao HOM05D006281 ORTHO05D005138 8.3e-06 55.5 60 48.3
Zm00001eb050110 Zea mays HOM05D006281 ORTHO05D005138 8.3e-06 55.5 64 43.8


User provided reference genes

Program Settings