Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 5.5e-130 467.6 234 100.0
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.6e-116 422.9 249 88.0
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 7.3e-82 307.8 233 67.8
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 8.1e-81 304.3 234 64.5
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 1.1e-80 303.9 235 65.5
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 3.1e-80 302.4 228 65.8
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 5.3e-80 301.6 228 66.2
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 6.9e-80 301.2 232 64.2
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 1.2e-79 300.4 234 64.1
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.5e-79 298.5 196 73.5
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 5.8e-79 298.1 230 63.9
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 5.8e-79 298.1 228 64.9
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 5.8e-79 298.1 235 62.6
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 9.9e-79 297.4 225 64.9
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.7e-78 296.6 233 64.8
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 2.9e-78 295.8 230 64.8
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 3.8e-78 295.4 231 62.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 3.8e-78 295.4 236 63.6
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 3.8e-78 295.4 228 64.5
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 6.4e-78 294.7 226 64.6
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 8.4e-78 294.3 234 64.1
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 2.4e-77 292.7 198 69.7
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 3.2e-77 292.4 200 69.0
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 5.4e-77 291.6 226 65.5
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 7.1e-77 291.2 230 62.2
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 7.1e-77 291.2 235 64.7
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.6e-76 290.0 202 67.3
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 1.6e-76 290.0 223 65.5
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.6e-76 290.0 203 68.0
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.1e-76 289.7 202 68.3
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 2.1e-76 289.7 228 63.2
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 2.7e-76 289.3 220 65.0
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 3.5e-76 288.9 218 64.2
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 3.5e-76 288.9 204 68.1
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.5e-76 288.9 227 63.9
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 6.0e-76 288.1 225 62.2
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 6.0e-76 288.1 227 63.9
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 7.9e-76 287.7 225 61.3
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 7.9e-76 287.7 229 62.4
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.0e-75 287.3 230 64.3
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.0e-75 287.3 227 63.9
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 1.3e-75 287.0 227 61.7
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.3e-75 287.0 227 61.2
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 1.3e-75 287.0 225 62.2
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.3e-75 287.0 225 64.4
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 1.8e-75 286.6 227 63.0
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 1.8e-75 286.6 211 65.4
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.3e-75 286.2 227 62.6
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 2.3e-75 286.2 212 65.1
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 3.0e-75 285.8 225 61.8
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 3.0e-75 285.8 225 61.8
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.0e-75 285.8 201 67.7
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 3.0e-75 285.8 228 61.8
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 3.9e-75 285.4 224 63.4
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 3.9e-75 285.4 228 62.7
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 3.9e-75 285.4 227 62.6
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 3.9e-75 285.4 200 67.5
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 5.1e-75 285.0 228 61.8
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 6.7e-75 284.6 223 64.6
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 1.1e-74 283.9 235 62.6
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.1e-74 283.9 235 63.4
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.9e-74 283.1 203 69.0
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 4.3e-74 282.0 228 61.8
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 5.6e-74 281.6 235 59.6
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 7.4e-74 281.2 225 60.4
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 9.6e-74 280.8 226 60.2
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.6e-73 280.0 238 59.2
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.1e-73 279.6 227 59.9
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 2.8e-73 279.3 229 59.8
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 3.6e-73 278.9 235 60.9
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 4.8e-73 278.5 240 61.7
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 8.1e-73 277.7 237 61.2
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.1e-72 277.3 236 58.9
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.8e-72 276.6 203 65.0
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.8e-72 276.6 228 62.3
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.4e-72 276.2 189 68.3
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.2e-71 273.9 203 64.5
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 3.4e-71 272.3 202 66.3
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 6.4e-70 268.1 200 63.5
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 1.4e-69 266.9 213 62.0
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.9e-69 266.5 249 55.8
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 2.4e-69 266.2 184 67.9
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 7.1e-69 264.6 201 64.2
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 9.3e-69 264.2 234 58.5
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 6.0e-68 261.5 203 62.6
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 5.1e-67 258.5 202 60.9
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 8.7e-67 257.7 221 56.6
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.5e-66 256.9 237 54.4
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.5e-66 256.1 231 59.7
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.3e-65 253.8 204 61.3
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.3e-65 253.8 176 68.8
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.3e-65 253.8 178 69.1
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 5.8e-63 245.0 174 68.4
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 7.6e-63 244.6 174 68.4
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.4e-61 240.4 201 57.7
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 6.3e-57 224.9 202 55.9
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 3.1e-56 222.6 158 68.4
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.5e-55 220.3 181 59.1
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 7.6e-55 218.0 160 64.4
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 2.2e-54 216.5 163 68.1
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 1.9e-50 203.4 205 46.8
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.8e-48 196.8 136 70.6
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.0e-47 193.4 184 54.9
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 6.5e-46 188.3 167 57.5
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.8e-43 180.3 160 58.8
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.1e-40 171.0 135 61.5
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.9e-37 160.2 111 71.2
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 1.5e-34 150.6 107 66.4
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 8.2e-33 144.8 86 76.7
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.1e-32 144.4 106 67.0
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 2.5e-29 133.3 84 73.8
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 2.7e-28 129.8 87 70.1
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 3.0e-27 126.3 118 61.0
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 1.4e-24 117.5 89 60.7
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 5.3e-24 115.5 139 47.5
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.3e-22 110.9 105 51.4
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 5.5e-21 105.5 70 70.0
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.6e-20 104.0 83 62.7
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.0e-19 101.3 65 70.8
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 6.8e-19 98.6 110 47.3
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 1.4e-16 90.9 79 53.2
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 7.7e-15 85.1 66 60.6
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 8.6e-14 81.6 66 62.1
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 1.8e-08 63.9 52 59.6


User provided reference genes

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