Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 5.7e-68 260.8 130 100.0
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 1.1e-58 229.9 160 76.9
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 3.6e-30 135.2 149 51.0
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 7.5e-28 127.5 160 46.9
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 4.6e-25 118.2 163 44.2
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 1.7e-24 116.3 164 40.9
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 6.6e-24 114.4 161 41.6
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 6.6e-24 114.4 161 43.5
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 1.1e-23 113.6 161 39.8
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 7.3e-23 110.9 160 38.8
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 1.6e-22 109.8 161 37.9
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 4.7e-22 108.2 163 39.9
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 4.7e-22 108.2 160 40.0
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 8.1e-22 107.5 84 59.5
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 1.1e-21 107.1 158 40.5
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 1.4e-21 106.7 83 61.4
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 1.8e-21 106.3 161 40.4
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.4e-21 105.9 165 40.0
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 4.0e-21 105.1 163 41.1
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 4.0e-21 105.1 161 41.0
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 5.2e-21 104.8 161 37.9
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 6.8e-21 104.4 136 42.6
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 6.8e-21 104.4 161 39.1
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 6.8e-21 104.4 90 52.2
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 2.6e-20 102.4 161 36.6
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.6e-20 102.4 80 58.8
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 4.4e-20 101.7 91 56.0
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 4.4e-20 101.7 83 57.8
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 4.4e-20 101.7 143 37.8
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 5.8e-20 101.3 89 51.7
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 5.8e-20 101.3 82 53.7
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 7.6e-20 100.9 82 53.7
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 9.9e-20 100.5 160 34.4
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 9.9e-20 100.5 91 51.6
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 9.9e-20 100.5 90 54.4
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 9.9e-20 100.5 89 49.4
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 1.7e-19 99.8 91 56.0
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 2.9e-19 99.0 163 38.7
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 6.4e-19 97.8 159 37.7
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 8.4e-19 97.4 160 36.9
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 8.4e-19 97.4 128 39.1
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 8.4e-19 97.4 84 56.0
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 1.1e-18 97.1 83 59.0
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.1e-18 97.1 90 50.0
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 1.9e-18 96.3 156 39.7
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 2.4e-18 95.9 164 36.6
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 5.4e-18 94.7 81 53.1
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 7.1e-18 94.4 82 54.9
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 9.2e-18 94.0 83 53.0
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.2e-17 93.6 83 53.0
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 1.2e-17 93.6 91 49.5
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 1.2e-17 93.6 85 55.3
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.6e-17 93.2 81 51.9
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 3.5e-17 92.0 69 58.0
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 6.0e-17 91.3 89 50.6
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 1.1e-15 87.0 116 39.7
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 1.1e-15 87.0 74 54.1
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 1.5e-15 86.7 86 47.7
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 1.5e-15 86.7 83 47.0
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 1.9e-15 86.3 116 39.7
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 2.5e-15 85.9 116 38.8
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 4.3e-15 85.1 90 44.4
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 9.6e-15 84.0 163 31.9
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 9.6e-15 84.0 116 39.7
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 1.6e-14 83.2 165 35.2
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 1.6e-14 83.2 84 47.6
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.6e-14 82.0 84 48.8
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.6e-14 82.0 84 48.8
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 6.2e-14 81.3 85 49.4
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 8.1e-14 80.9 163 31.3
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 8.1e-14 80.9 163 31.3
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 8.1e-14 80.9 163 31.3
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 1.1e-13 80.5 163 31.3
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 1.1e-13 80.5 163 31.3
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 1.4e-13 80.1 84 46.4
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 2.4e-13 79.3 99 44.4
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 2.4e-13 79.3 83 50.6
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 3.1e-13 79.0 90 43.3
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 6.9e-13 77.8 76 50.0
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 9.0e-13 77.4 160 33.8
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 9.0e-13 77.4 80 43.8
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 1.2e-12 77.0 66 53.0
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 1.2e-12 77.0 90 43.3
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 2.6e-12 75.9 78 48.7
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 3.4e-12 75.5 127 34.6
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 4.4e-12 75.1 168 33.9
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 5.8e-12 74.7 75 49.3
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 7.6e-12 74.3 75 48.0
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 9.9e-12 73.9 75 48.0
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 8.4e-11 70.9 71 47.9
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 3.2e-10 68.9 81 44.4
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 1.6e-09 66.6 90 40.0
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 1.6e-09 66.6 90 40.0
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 1.3e-08 63.5 82 39.0
MBI13_g11934_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 1.3e-06 57.0 72 37.5
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 4.8e-06 55.1 133 27.8


User provided reference genes

Program Settings