Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 6.5e-111 404.4 264 100.0
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 5.1e-108 394.8 264 97.7
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 7.0e-65 251.5 212 65.1
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 3.5e-64 249.2 212 63.7
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 1.7e-63 246.9 203 67.5
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 6.6e-63 245.0 210 63.8
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.5e-62 243.8 210 63.3
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 3.6e-61 239.2 212 60.8
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.1e-60 237.7 212 60.4
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 1.8e-60 236.9 211 64.5
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 2.3e-60 236.5 214 63.1
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 4.0e-60 235.7 212 59.0
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 5.2e-60 235.3 214 62.6
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 6.8e-60 235.0 210 62.4
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 1.2e-59 234.2 210 60.5
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 2.6e-59 233.0 210 60.0
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 2.6e-59 233.0 209 59.8
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 3.4e-59 232.6 218 60.6
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 1.7e-58 230.3 208 62.0
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 2.2e-58 229.9 185 63.8
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 2.2e-58 229.9 210 59.0
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 2.9e-58 229.6 211 60.7
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 2.9e-58 229.6 213 59.2
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 1.1e-57 227.6 208 62.0
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.4e-57 227.3 210 61.0
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 1.9e-57 226.9 211 58.8
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 3.2e-57 226.1 211 58.8
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 5.4e-57 225.3 220 58.2
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 5.4e-57 225.3 216 56.9
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 1.2e-56 224.2 214 60.7
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.6e-56 223.8 232 54.7
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 2.1e-56 223.4 234 56.0
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.1e-56 223.4 193 63.2
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 2.7e-56 223.0 211 58.3
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 3.5e-56 222.6 207 62.3
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 4.6e-56 222.2 210 59.5
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 6.0e-56 221.9 214 57.9
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 7.8e-56 221.5 209 61.2
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.7e-55 220.3 187 61.0
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 1.7e-55 220.3 210 57.6
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.7e-55 220.3 206 61.2
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 2.3e-55 219.9 215 58.6
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 2.3e-55 219.9 211 58.3
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 3.0e-55 219.5 211 59.7
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 3.0e-55 219.5 216 58.3
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 3.9e-55 219.2 215 59.5
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 5.1e-55 218.8 213 56.3
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 6.6e-55 218.4 212 60.8
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 6.6e-55 218.4 210 57.1
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 6.6e-55 218.4 211 59.2
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 6.6e-55 218.4 203 61.1
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 6.6e-55 218.4 208 61.1
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 8.6e-55 218.0 209 59.3
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 8.6e-55 218.0 214 58.9
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 1.1e-54 217.6 215 58.6
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 1.5e-54 217.2 214 58.4
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 1.5e-54 217.2 209 56.5
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 1.5e-54 217.2 217 57.6
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 1.9e-54 216.9 206 59.2
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 1.9e-54 216.9 206 59.2
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 1.9e-54 216.9 206 59.2
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 1.9e-54 216.9 216 56.0
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 1.9e-54 216.9 212 59.4
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 1.9e-54 216.9 202 61.9
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 2.5e-54 216.5 216 56.9
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 3.3e-54 216.1 215 58.1
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 3.3e-54 216.1 215 58.1
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 3.3e-54 216.1 216 56.9
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 3.3e-54 216.1 212 57.1
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 4.3e-54 215.7 215 58.1
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 7.3e-54 214.9 209 58.4
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.2e-53 214.2 212 59.9
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 1.6e-53 213.8 185 59.5
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 2.8e-53 213.0 228 55.3
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 2.8e-53 213.0 211 57.8
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 3.6e-53 212.6 206 55.3
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.6e-53 212.6 211 57.8
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 6.2e-53 211.8 177 70.6
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 8.1e-53 211.5 209 59.3
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.1e-52 211.1 212 59.4
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 3.1e-52 209.5 209 58.4
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 1.2e-51 207.6 219 56.2
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.2e-51 207.6 227 55.5
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.2e-51 207.6 216 55.6
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 1.5e-51 207.2 207 57.0
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 2.0e-51 206.8 216 55.6
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 7.6e-51 204.9 203 60.1
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 7.6e-51 204.9 210 54.3
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 9.9e-51 204.5 209 58.9
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.3e-50 204.1 210 59.0
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 1.7e-50 203.8 167 62.3
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.7e-50 203.8 204 55.4
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 2.9e-50 203.0 217 53.9
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 9.2e-49 198.0 195 57.4
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 4.6e-48 195.7 225 52.4
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.3e-47 194.1 209 53.6
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 3.0e-47 193.0 253 50.2
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 3.3e-46 189.5 125 75.2
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 4.3e-46 189.1 203 54.2
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 6.2e-45 185.3 128 71.1
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 8.1e-45 184.9 227 48.0
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 1.1e-44 184.5 186 57.0
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 1.8e-44 183.7 133 66.9
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 5.8e-43 178.7 138 71.0
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.3e-42 177.6 166 60.8
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 2.2e-42 176.8 169 58.0
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 9.3e-41 171.4 152 59.2
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.2e-40 171.0 125 64.8
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 6.0e-40 168.7 117 71.8
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 3.3e-38 162.9 148 58.1
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 4.3e-38 162.5 173 52.6
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 5.3e-36 155.6 157 54.1
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.2e-35 154.5 156 50.6
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 2.0e-35 153.7 208 49.5
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 3.4e-35 152.9 213 47.9
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 3.8e-34 149.4 174 47.7
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 8.4e-34 148.3 202 46.0
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.1e-33 147.9 164 48.2
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 9.3e-33 144.8 108 63.9
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 6.0e-32 142.1 130 60.0
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 6.9e-28 128.6 107 65.4
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 8.4e-26 121.7 108 57.4
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.2e-25 119.8 161 45.3
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.6e-21 107.5 145 46.2
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 2.0e-19 100.5 170 37.6
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 2.7e-16 90.1 95 57.9
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 4.5e-11 72.8 104 45.2
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 5.9e-11 72.4 87 52.9
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 3.9e-07 59.7 45 60.0


User provided reference genes

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