Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 5.7e-136 487.6 256 100.0
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 7.2e-131 470.7 255 96.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 3.5e-85 318.9 232 71.1
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 5.9e-85 318.2 255 66.3
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.3e-84 316.2 248 68.1
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 2.9e-84 315.8 241 68.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 4.0e-81 305.4 238 67.6
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.2e-80 303.9 235 68.1
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 7.5e-80 301.2 242 68.2
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 1.7e-79 300.1 260 62.7
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.9e-79 299.3 242 67.4
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 2.4e-78 296.2 231 68.4
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 3.2e-78 295.8 234 67.1
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.2e-78 294.3 242 64.9
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.6e-77 293.5 242 64.9
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.6e-77 293.5 248 64.1
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 2.0e-77 293.1 252 64.3
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 6.0e-77 291.6 253 62.1
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.8e-77 291.2 242 64.5
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.3e-76 290.4 242 64.5
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 3.0e-76 289.3 249 61.8
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 3.9e-76 288.9 255 61.6
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.9e-75 286.6 241 63.9
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 4.3e-75 285.4 225 66.2
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 4.3e-75 285.4 256 60.5
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 5.6e-75 285.0 230 67.8
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 7.3e-75 284.6 236 64.4
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.5e-75 284.3 225 67.1
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.6e-74 283.5 238 64.3
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.8e-73 280.0 256 59.8
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 3.1e-73 279.3 238 60.1
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 4.0e-73 278.9 238 62.2
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 4.0e-73 278.9 256 59.0
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 4.0e-73 278.9 202 69.8
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 8.9e-73 277.7 251 62.2
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.0e-72 276.6 251 61.8
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.4e-72 275.4 251 61.0
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 5.8e-72 275.0 253 59.7
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 5.8e-72 275.0 251 61.0
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 5.8e-72 275.0 251 61.0
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.3e-71 273.9 228 61.8
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.7e-71 273.5 251 58.6
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.7e-71 273.5 243 61.3
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 2.9e-71 272.7 238 63.0
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.1e-70 270.8 238 61.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.1e-70 270.8 238 60.5
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.4e-70 270.4 251 57.8
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 5.4e-70 268.5 246 59.3
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 5.4e-70 268.5 238 59.7
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 7.0e-70 268.1 243 63.8
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 9.2e-70 267.7 239 61.1
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.6e-69 266.9 241 58.5
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.6e-69 266.9 236 62.7
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.6e-69 266.9 247 59.1
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 6.0e-69 265.0 234 60.3
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 7.8e-69 264.6 238 59.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.0e-68 264.2 237 59.9
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.3e-68 263.8 243 59.3
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 3.0e-68 262.7 256 57.8
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.5e-67 260.4 249 58.6
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.3e-67 259.2 251 58.2
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 3.3e-67 259.2 236 59.3
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 5.6e-67 258.5 251 57.8
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 4.7e-66 255.4 229 59.8
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 6.2e-66 255.0 248 57.7
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.1e-65 254.2 238 58.8
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.1e-65 252.7 282 51.8
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 5.2e-65 251.9 248 52.8
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 6.8e-65 251.5 248 52.8
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.2e-64 250.8 255 57.3
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 2.6e-64 249.6 228 58.3
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 9.9e-64 247.7 231 58.0
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.3e-63 247.3 189 64.6
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 3.7e-63 245.7 180 67.8
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 4.9e-63 245.4 214 59.8
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.9e-62 243.4 211 60.7
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 3.2e-62 242.7 253 56.5
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.6e-61 240.4 199 62.3
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 2.1e-61 240.0 261 52.9
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 3.5e-61 239.2 235 58.3
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 6.0e-61 238.4 237 56.1
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 6.0e-61 238.4 179 65.9
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 7.8e-61 238.0 200 60.0
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 7.8e-61 238.0 200 60.0
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.0e-60 237.7 211 57.8
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 1.3e-60 237.3 222 55.4
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 5.1e-60 235.3 202 60.4
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 6.6e-60 235.0 200 59.5
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 6.6e-60 235.0 184 64.1
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.1e-59 234.2 297 48.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 3.3e-59 232.6 203 60.6
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 5.6e-59 231.9 185 62.7
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 6.2e-58 228.4 268 50.7
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 9.9e-56 221.1 240 49.2
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 4.9e-55 218.8 175 64.0
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 6.4e-55 218.4 224 54.5
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 7.8e-53 211.5 138 74.6
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 5.8e-48 195.3 157 63.7
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 4.9e-47 192.2 190 59.5
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.8e-45 184.9 166 59.6
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 6.6e-44 181.8 181 55.2
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 9.6e-43 177.9 178 56.7
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 9.6e-43 177.9 179 55.3
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.8e-41 173.7 155 59.4
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 4.6e-37 159.1 167 47.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.8e-34 149.1 114 66.7
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 4.8e-34 149.1 125 62.4
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.9e-31 139.8 105 70.5
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 4.2e-30 136.0 104 69.2
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 6.0e-29 132.1 101 61.4
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.5e-27 127.5 193 42.0
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 5.6e-27 125.6 125 55.2
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.9e-22 110.5 201 31.3
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 2.4e-17 93.6 237 29.5
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 5.0e-15 85.9 61 68.9
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.5e-15 85.5 96 44.8
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 3.2e-14 83.2 55 76.4
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.3e-10 71.2 83 50.6
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 2.8e-10 70.1 56 62.5
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.3e-09 65.9 49 67.3
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 9.1e-09 65.1 39 79.5
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 1.0e-07 61.6 165 29.1


User provided reference genes

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