Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 5.9e-222 773.9 384 100.0
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 7.2e-220 766.9 384 99.0
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 7.1e-167 590.9 388 79.1
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 3.9e-165 585.1 394 75.1
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 1.9e-164 582.8 389 76.6
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.6e-163 579.7 386 75.6
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 1.1e-162 577.0 392 75.3
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 1.8e-162 576.2 386 74.1
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 9.0e-162 573.9 386 73.8
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 2.6e-161 572.4 386 75.9
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 7.6e-161 570.9 386 73.6
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 1.3e-160 570.1 388 74.0
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 1.7e-160 569.7 388 74.7
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 2.9e-160 568.9 386 75.6
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 6.5e-160 567.8 388 74.7
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 8.4e-160 567.4 394 71.8
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 1.1e-159 567.0 389 75.8
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 2.5e-159 565.8 389 74.3
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 2.5e-159 565.8 386 74.6
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 7.1e-159 564.3 387 75.5
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 1.2e-158 563.5 388 73.5
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.6e-158 563.1 389 73.8
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.6e-158 563.1 389 73.8
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 2.7e-158 562.4 394 72.6
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 4.6e-158 561.6 389 73.3
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 7.9e-158 560.8 386 73.1
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 3.3e-156 555.4 388 73.5
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.3e-156 555.4 388 73.5
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 4.3e-156 555.1 382 72.3
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 4.3e-156 555.1 387 73.4
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 7.4e-156 554.3 386 73.1
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 9.6e-156 553.9 387 73.9
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 4.8e-155 551.6 389 72.5
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 4.8e-155 551.6 389 72.5
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 8.2e-155 550.8 390 73.1
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.1e-154 550.4 390 73.1
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 1.4e-154 550.1 390 70.8
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 1.8e-154 549.7 390 71.0
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 3.1e-154 548.9 387 72.1
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.3e-154 548.1 390 72.8
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 2.0e-153 546.2 391 73.1
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 2.6e-153 545.8 390 72.6
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 3.4e-153 545.4 407 71.0
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 7.6e-153 544.3 386 71.5
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 7.6e-153 544.3 398 70.6
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 3.8e-152 542.0 389 70.2
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 6.5e-152 541.2 388 73.2
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 4.2e-151 538.5 388 71.4
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 4.2e-151 538.5 388 71.4
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 5.5e-151 538.1 396 69.4
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 7.2e-151 537.7 387 70.5
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 2.7e-150 535.8 386 71.2
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.0e-149 533.9 392 72.2
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 3.3e-148 528.9 391 69.3
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.3e-148 528.9 386 69.9
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 4.3e-148 528.5 392 69.6
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 3.7e-147 525.4 397 67.8
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 6.3e-147 524.6 468 60.9
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 1.4e-146 523.5 435 64.6
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 4.1e-146 521.9 387 68.0
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 4.5e-145 518.5 387 69.0
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 7.7e-145 517.7 390 69.0
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 1.7e-144 516.5 360 72.2
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 1.7e-144 516.5 297 82.8
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 2.2e-144 516.2 371 69.8
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 2.9e-144 515.8 390 66.4
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 3.8e-144 515.4 389 68.6
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 6.5e-144 514.6 389 68.4
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.4e-143 513.5 371 69.3
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 3.2e-143 512.3 389 68.4
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.2e-142 510.4 389 67.4
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.6e-142 510.0 389 69.7
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 2.1e-142 509.6 386 68.7
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.4e-141 506.9 385 66.8
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 3.9e-141 505.4 388 66.8
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 5.1e-141 505.0 386 66.8
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 3.3e-140 502.3 372 68.5
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 9.7e-140 500.7 390 66.4
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 8.2e-139 497.7 385 65.5
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.1e-138 497.3 390 65.6
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 1.8e-138 496.5 385 65.2
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 2.2e-136 489.6 388 66.0
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 2.9e-136 489.2 494 56.5
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 3.8e-136 488.8 388 64.9
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 1.9e-135 486.5 281 81.5
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 4.7e-134 481.9 433 61.7
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.3e-133 479.6 390 63.8
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 5.1e-133 478.4 330 69.7
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.3e-132 475.7 388 64.7
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 4.4e-132 475.3 390 63.1
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.4e-132 475.3 389 64.8
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 1.4e-130 470.3 400 63.8
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 7.7e-129 464.5 304 71.7
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 2.2e-128 463.0 296 75.3
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 2.5e-127 459.5 294 76.5
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 2.5e-119 433.0 368 62.8
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 6.8e-117 424.9 384 61.7
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 2.0e-108 396.7 330 65.8
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 3.3e-103 379.4 293 60.8
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.3e-101 373.2 322 56.5
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 6.8e-101 371.7 296 58.4
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 3.4e-100 369.4 228 77.2
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 4.1e-98 362.5 296 56.8
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.2e-94 350.9 273 64.5
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 4.7e-94 349.0 217 73.7
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 8.0e-94 348.2 213 77.5
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 8.0e-94 348.2 213 77.5
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 8.0e-94 348.2 213 77.5
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 1.1e-90 337.8 213 77.0
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 6.4e-83 312.0 290 59.0
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 1.0e-80 304.7 291 49.5
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 1.4e-74 284.3 230 63.5
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 1.3e-72 277.7 304 45.4
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.1e-71 274.6 177 75.7
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 7.3e-71 271.9 285 46.0
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 7.1e-66 255.4 278 45.0
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 3.6e-62 243.0 157 79.0
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 1.9e-58 230.7 135 83.7
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 6.7e-40 169.1 171 56.1
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 2.5e-39 167.2 161 47.8
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.4e-37 160.6 174 49.4
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 3.9e-32 143.3 178 48.9
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 2.2e-30 137.5 95 65.3
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 2.2e-30 137.5 106 63.2
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 7.7e-28 129.0 87 65.5
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 1.7e-22 111.3 64 73.4
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 9.7e-15 85.5 46 80.4
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 9.7e-15 85.5 46 80.4
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 1.5e-10 71.6 111 43.2
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 3.0e-08 63.9 41 73.2


User provided reference genes

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