Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 5.4e-104 380.9 186 100.0
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 3.9e-102 374.8 186 98.4
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 9.6e-85 317.0 187 82.4
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 2.1e-84 315.8 187 79.7
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 1.8e-83 312.8 187 80.2
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 2.4e-83 312.4 187 80.7
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 2.4e-83 312.4 187 80.7
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 5.3e-83 311.2 187 79.7
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.2e-82 310.1 186 80.1
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 1.5e-82 309.7 187 79.1
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 2.0e-82 309.3 181 78.5
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 2.0e-82 309.3 187 79.7
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 2.6e-82 308.9 187 78.1
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 2.6e-82 308.9 187 78.1
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 3.4e-82 308.5 187 79.7
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 3.4e-82 308.5 186 77.4
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 4.5e-82 308.1 187 79.1
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 4.5e-82 308.1 187 78.1
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 4.5e-82 308.1 187 77.0
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 5.8e-82 307.8 181 79.0
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 9.9e-82 307.0 187 78.1
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 9.9e-82 307.0 187 80.2
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 1.3e-81 306.6 187 78.1
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.3e-81 306.6 185 76.2
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.7e-81 306.2 187 78.1
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.7e-81 306.2 187 78.1
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 1.7e-81 306.2 187 77.5
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 1.7e-81 306.2 187 78.6
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 1.7e-81 306.2 187 77.0
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.2e-81 305.8 187 78.1
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 2.2e-81 305.8 187 79.7
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 3.8e-81 305.1 187 78.1
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 3.8e-81 305.1 187 75.4
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 3.8e-81 305.1 182 76.9
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 4.9e-81 304.7 187 77.5
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 4.9e-81 304.7 181 77.9
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 4.9e-81 304.7 182 76.4
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 6.4e-81 304.3 182 75.8
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 6.4e-81 304.3 187 77.5
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 8.4e-81 303.9 185 75.1
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 1.1e-80 303.5 181 76.8
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.1e-80 303.5 181 76.8
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 1.4e-80 303.1 182 75.8
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 1.4e-80 303.1 188 76.1
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 1.9e-80 302.8 182 75.3
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 1.9e-80 302.8 182 75.3
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 1.9e-80 302.8 182 75.3
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 1.9e-80 302.8 186 77.4
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 1.9e-80 302.8 187 75.9
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 2.4e-80 302.4 187 77.0
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 2.4e-80 302.4 182 75.3
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 2.4e-80 302.4 181 77.9
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 2.4e-80 302.4 185 77.3
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 3.2e-80 302.0 181 76.2
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 3.2e-80 302.0 185 77.3
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 3.2e-80 302.0 187 77.0
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 4.2e-80 301.6 182 74.7
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 4.2e-80 301.6 181 77.3
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 5.5e-80 301.2 186 74.7
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 7.1e-80 300.8 185 77.3
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 7.1e-80 300.8 188 75.0
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 7.1e-80 300.8 185 76.8
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 9.3e-80 300.4 182 74.2
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 9.3e-80 300.4 187 76.5
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 9.3e-80 300.4 185 76.8
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 1.6e-79 299.7 181 76.8
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 2.1e-79 299.3 181 78.5
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 3.5e-79 298.5 181 76.8
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 3.5e-79 298.5 185 76.8
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 3.5e-79 298.5 181 75.1
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 4.6e-79 298.1 187 75.9
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 4.6e-79 298.1 181 76.2
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 6.0e-79 297.7 187 73.3
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 6.0e-79 297.7 186 74.7
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 7.9e-79 297.4 175 78.9
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 7.9e-79 297.4 187 74.3
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 1.0e-78 297.0 187 74.3
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 1.3e-78 296.6 179 76.5
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 3.0e-78 295.4 181 75.7
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 3.9e-78 295.0 181 74.0
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 6.7e-78 294.3 181 74.0
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 6.7e-78 294.3 187 74.3
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 8.7e-78 293.9 188 72.9
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 1.1e-77 293.5 181 73.5
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 1.1e-77 293.5 181 73.5
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.1e-77 293.5 179 74.3
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 1.1e-77 293.5 179 74.3
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 1.5e-77 293.1 185 73.5
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.9e-77 292.7 187 74.3
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 2.5e-77 292.4 187 73.8
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.5e-77 292.4 185 75.7
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 3.3e-77 292.0 187 73.3
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 3.3e-77 292.0 174 78.2
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 9.6e-77 290.4 172 79.1
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 1.3e-76 290.0 185 74.6
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.3e-76 290.0 185 74.6
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 2.1e-76 289.3 185 73.0
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 4.8e-76 288.1 187 72.2
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 6.2e-76 287.7 185 72.4
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 8.2e-76 287.3 181 74.6
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.1e-75 287.0 185 74.1
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.8e-75 286.2 185 74.6
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 1.5e-74 283.1 186 71.5
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 2.0e-74 282.7 187 73.3
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 2.6e-74 282.3 187 70.1
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 4.5e-74 281.6 187 72.7
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 5.8e-74 281.2 173 75.1
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 7.1e-72 274.2 181 70.2
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 9.3e-72 273.9 183 73.8
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 1.6e-71 273.1 180 68.9
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 2.7e-71 272.3 181 70.7
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 2.7e-71 272.3 181 70.7
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 1.0e-70 270.4 181 71.3
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 1.8e-70 269.6 181 69.6
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 1.8e-70 269.6 181 70.7
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 3.0e-70 268.9 181 70.7
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 3.0e-70 268.9 181 69.6
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 3.9e-70 268.5 179 69.8
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 3.1e-67 258.8 181 65.7
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 3.1e-67 258.8 185 67.0
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 6.7e-62 241.1 180 56.1
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 2.5e-56 222.6 182 54.4
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 1.8e-54 216.5 176 52.3
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 5.7e-53 211.5 190 52.1
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 2.8e-52 209.1 172 61.0
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 1.2e-50 203.8 185 47.6
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 2.0e-50 203.0 174 51.1
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 4.5e-42 175.3 151 51.7
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.4e-38 163.7 180 47.8
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 1.2e-29 134.0 172 44.2
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 1.3e-28 130.6 87 72.4
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 3.0e-22 109.4 154 35.7
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 1.3e-20 104.0 87 56.3
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 6.3e-20 101.7 54 83.3
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 1.1e-06 57.8 101 31.7


User provided reference genes

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