Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4313 Papaver somniferum HOM05D004149 ORTHO05D005028 2.5e-127 458.8 229 100.0
PSO339G1238 Papaver somniferum HOM05D004149 ORTHO05D005028 6.2e-126 454.1 229 98.7
Aqoxy4G02534 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 1.4e-82 310.1 235 68.5
Nn2g10866 Nelumbo nucifera HOM05D004149 ORTHO05D005028 1.8e-80 303.1 231 67.5
Lj3A951T30 Lonicera japonica HOM05D004149 ORTHO05D005028 3.3e-79 298.9 262 60.7
Dinv14509 Davidia involucrata HOM05D004149 ORTHO05D005028 4.4e-79 298.5 231 68.0
TAR633G0450 Trochodendron aralioides HOM05D004149 ORTHO05D005028 1.3e-78 297.0 231 66.7
Lsat_1_v5_gn_5_149460 Lactuca sativa HOM05D004149 ORTHO05D005028 1.1e-77 293.9 239 62.8
GSVIVG01011172001 Vitis vinifera HOM05D004149 ORTHO05D005028 1.4e-77 293.5 230 66.1
HanXRQChr13g0406611 Helianthus annuus HOM05D004149 ORTHO05D005028 4.1e-77 292.0 228 62.7
DCAR_018696 Daucus carota HOM05D004149 ORTHO05D005028 2.6e-76 289.3 232 62.5
Hma1.2p1_0479F.1_g161390 Hydrangea macrophylla HOM05D004149 ORTHO05D005028 1.0e-75 287.3 230 65.7
QL07p035253 Quercus lobata HOM05D004149 ORTHO05D005028 1.0e-75 287.3 234 61.5
Duzib168G0285 Durio zibethinus HOM05D004149 ORTHO05D005028 1.1e-74 283.9 232 62.5
ATR0681G135 Amborella trichopoda HOM05D004149 ORTHO05D005028 1.4e-74 283.5 225 64.0
CSS0009567 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 2.5e-74 282.7 230 63.5
CiPaw.09G210500 Carya illinoinensis HOM05D004149 ORTHO05D005028 2.5e-74 282.7 232 63.4
Gohir.A09G089600 Gossypium hirsutum HOM05D004149 ORTHO05D005028 1.6e-73 280.0 225 63.1
Actinidia11575 Actinidia chinensis HOM05D004149 ORTHO05D005028 2.1e-73 279.6 237 62.9
MD03G1067200 Malus domestica HOM05D004149 ORTHO05D005028 6.1e-73 278.1 235 61.3
Haze_21017 Corylus avellana HOM05D004149 ORTHO05D005028 8.0e-73 277.7 233 60.9
Cfa017194 Carpinus fangiana HOM05D004149 ORTHO05D005028 1.4e-72 276.9 233 60.5
SGA_v2.0_scaffold75G25021 Striga asiatica HOM05D004149 ORTHO05D005028 1.4e-72 276.9 237 60.3
Ciclev10029239m.g Citrus clementina HOM05D004149 ORTHO05D005028 2.3e-72 276.2 232 61.2
Eucgr.B02246 Eucalyptus grandis HOM05D004149 ORTHO05D005028 5.2e-72 275.0 231 59.7
Gohir.D09G089700 Gossypium hirsutum HOM05D004149 ORTHO05D005028 6.7e-72 274.6 225 62.7
Nitab4.5_0000261g0010 Nicotiana tabacum HOM05D004149 ORTHO05D005028 6.7e-72 274.6 232 62.9
Gorai.006G105900 Gossypium raimondii HOM05D004149 ORTHO05D005028 8.8e-72 274.2 225 62.7
CAN.G740.4 Capsicum annuum HOM05D004149 ORTHO05D005028 1.1e-71 273.9 232 61.6
Nitab4.5_0002020g0030 Nicotiana tabacum HOM05D004149 ORTHO05D005028 2.0e-71 273.1 231 61.9
BcaB01g04503 Brassica carinata HOM05D004149 ORTHO05D005028 2.6e-71 272.7 228 59.6
Potri.009G047000 Populus trichocarpa HOM05D004149 ORTHO05D005028 2.6e-71 272.7 222 60.4
ClCG10G022210 Citrullus lanatus HOM05D004149 ORTHO05D005028 3.3e-71 272.3 242 57.0
Cc06_g01230 Coffea canephora HOM05D004149 ORTHO05D005028 4.4e-71 271.9 239 58.2
Manes.01G160400 Manihot esculenta HOM05D004149 ORTHO05D005028 4.4e-71 271.9 226 62.4
Potri.016G117600 Populus trichocarpa HOM05D004149 ORTHO05D005028 5.7e-71 271.6 222 64.4
Sabra16G0113700 Salix brachista HOM05D004149 ORTHO05D005028 5.7e-71 271.6 223 63.7
MELO3C009158.2 Cucumis melo HOM05D004149 ORTHO05D005028 7.4e-71 271.2 231 58.0
BolC3t13864H Brassica oleracea HOM05D004149 ORTHO05D005028 9.7e-71 270.8 226 59.3
Migut.J00152 Erythranthe guttata HOM05D004149 ORTHO05D005028 9.7e-71 270.8 225 61.8
Thecc.09G299600 Theobroma cacao HOM05D004149 ORTHO05D005028 9.7e-71 270.8 229 61.1
QL01p038648 Quercus lobata HOM05D004149 ORTHO05D005028 1.3e-70 270.4 233 60.5
C09p50720 Brassica napus HOM05D004149 ORTHO05D005028 1.7e-70 270.0 224 59.4
CsaV3_3G033680 Cucumis sativus L. HOM05D004149 ORTHO05D005028 1.7e-70 270.0 231 58.0
Prupe.6G279000 Prunus persica HOM05D004149 ORTHO05D005028 3.7e-70 268.9 243 57.2
unitig_578.g15899 Utricularia gibba HOM05D004149 ORTHO05D005028 4.8e-70 268.5 233 57.1
arahy.Tifrunner.gnm1.ann1.43A4DE Arachis hypogaea HOM05D004149 ORTHO05D005028 8.2e-70 267.7 223 60.5
BolC9t57922H Brassica oleracea HOM05D004149 ORTHO05D005028 1.1e-69 267.3 230 57.8
Carub.0008s1926 Capsella rubella HOM05D004149 ORTHO05D005028 1.1e-69 267.3 223 60.1
C03p14190 Brassica napus HOM05D004149 ORTHO05D005028 1.4e-69 266.9 228 59.6
A10p15620 Brassica napus HOM05D004149 ORTHO05D005028 1.8e-69 266.5 230 59.1
BraA10t43671Z Brassica rapa HOM05D004149 ORTHO05D005028 1.8e-69 266.5 230 59.1
Sed0021100 Sechium edule HOM05D004149 ORTHO05D005028 1.8e-69 266.5 226 59.7
Sopen09g001490 Solanum pennellii HOM05D004149 ORTHO05D005028 1.8e-69 266.5 231 60.2
Medtr5g071240 Medicago truncatula HOM05D004149 ORTHO05D005028 2.4e-69 266.2 222 60.8
Thhalv10014590m.g Eutrema salsugineum HOM05D004149 ORTHO05D005028 3.1e-69 265.8 225 59.6
Haze_24342 Corylus avellana HOM05D004149 ORTHO05D005028 4.1e-69 265.4 234 60.3
Sp6g20340 Schrenkiella parvula HOM05D004149 ORTHO05D005028 4.1e-69 265.4 225 59.1
PGSC0003DMG400004449 Solanum tuberosum HOM05D004149 ORTHO05D005028 7.0e-69 264.6 233 60.1
TPR.G34577 Trifolium pratense HOM05D004149 ORTHO05D005028 7.0e-69 264.6 225 59.6
CARHR272500 Cardamine hirsuta HOM05D004149 ORTHO05D005028 9.1e-69 264.2 222 58.6
MD11G1071900 Malus domestica HOM05D004149 ORTHO05D005028 9.1e-69 264.2 237 58.2
LjContig00155g0022980 Lotus japonicus HOM05D004149 ORTHO05D005028 1.6e-68 263.5 218 61.5
Rhsim05G0216800 Rhododendron simsii HOM05D004149 ORTHO05D005028 2.0e-68 263.1 232 58.6
arahy.Tifrunner.gnm1.ann1.AG3942 Arachis hypogaea HOM05D004149 ORTHO05D005028 2.6e-68 262.7 224 59.4
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 5.9e-68 261.5 218 62.4
Prupe.6G055700 Prunus persica HOM05D004149 ORTHO05D005028 5.9e-68 261.5 225 59.1
TWI31G0142 Tripterygium wilfordii HOM05D004149 ORTHO05D005028 5.9e-68 261.5 232 58.6
AT3G47300 Arabidopsis thaliana HOM05D004149 ORTHO05D005028 7.7e-68 261.2 208 61.5
AT5G58640 Arabidopsis thaliana HOM05D004149 ORTHO05D005028 7.7e-68 261.2 226 58.0
ECA248G2679 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.7e-68 261.2 222 57.7
Aa31LG4G16110 Aethionema arabicum HOM05D004149 ORTHO05D005028 1.0e-67 260.8 244 54.9
Lalb_Chr07g0193651 Lupinus albus HOM05D004149 ORTHO05D005028 1.0e-67 260.8 230 60.0
Lalb_Chr10g0103381 Lupinus albus HOM05D004149 ORTHO05D005028 2.2e-67 259.6 234 58.1
Psat2g057600 Pisum sativum HOM05D004149 ORTHO05D005028 2.2e-67 259.6 223 58.7
RcHm_v2.0_Chr5g0070001 Rosa chinensis HOM05D004149 ORTHO05D005028 3.8e-67 258.8 234 57.7
Thhalv10010643m.g Eutrema salsugineum HOM05D004149 ORTHO05D005028 5.0e-67 258.5 216 58.8
AL8G34910 Arabidopsis lyrata HOM05D004149 ORTHO05D005028 1.1e-66 257.3 225 57.8
A03p12090 Brassica napus HOM05D004149 ORTHO05D005028 3.2e-66 255.8 222 56.8
BraA03t10521Z Brassica rapa HOM05D004149 ORTHO05D005028 3.2e-66 255.8 222 56.8
Potri.001G253000 Populus trichocarpa HOM05D004149 ORTHO05D005028 4.2e-66 255.4 229 57.6
FAN25G1984 Fragaria x ananassa HOM05D004149 ORTHO05D005028 9.4e-66 254.2 230 57.4
EL10Ac5g12549 Beta vulgaris HOM05D004149 ORTHO05D005028 2.1e-65 253.1 231 57.6
FvH4_3g38810 Fragaria vesca HOM05D004149 ORTHO05D005028 2.7e-65 252.7 231 57.1
Lalb_Chr04g0252201 Lupinus albus HOM05D004149 ORTHO05D005028 3.6e-65 252.3 232 55.6
FAN16G0525 Fragaria x ananassa HOM05D004149 ORTHO05D005028 4.7e-65 251.9 231 57.1
Ah.12g058720 Amaranthus hybridus HOM05D004149 ORTHO05D005028 6.1e-65 251.5 230 56.1
PGR102G2658 Punica granatum HOM05D004149 ORTHO05D005028 1.8e-64 250.0 231 55.0
Glyma.03G056500 Glycine max HOM05D004149 ORTHO05D005028 2.3e-64 249.6 229 56.3
Phvul.010G076100 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 5.2e-64 248.4 226 58.0
Sc22g0002520 Simmondsia chinensis HOM05D004149 ORTHO05D005028 5.2e-64 248.4 229 55.5
CDE04G2602 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 1.2e-63 247.3 218 59.2
CANSAT54G2318 Cannabis sativa HOM05D004149 ORTHO05D005028 1.5e-63 246.9 266 51.1
Ca_20283_v3 Cicer arietinum L. HOM05D004149 ORTHO05D005028 2.6e-63 246.1 230 56.1
arahy.Tifrunner.gnm1.ann1.JHY1NE Arachis hypogaea HOM05D004149 ORTHO05D005028 3.4e-63 245.7 231 56.3
VMungo0647G1724 Vigna mungo HOM05D004149 ORTHO05D005028 4.4e-63 245.4 246 53.7
VMungo0331G2046 Vigna mungo HOM05D004149 ORTHO05D005028 1.3e-62 243.8 227 56.4
Sabra09G0034400 Salix brachista HOM05D004149 ORTHO05D005028 2.2e-62 243.0 268 49.6
arahy.Tifrunner.gnm1.ann1.CPEN6V Arachis hypogaea HOM05D004149 ORTHO05D005028 2.8e-62 242.7 229 55.9
Os01g0832200 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 2.8e-62 242.7 237 54.4
CDE03G0191 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 3.7e-62 242.3 217 57.1
Glyma.02G227600 Glycine max HOM05D004149 ORTHO05D005028 3.7e-62 242.3 239 53.6
Lj2C73G10 Lonicera japonica HOM05D004149 ORTHO05D005028 6.3e-62 241.5 272 50.0
MD12G1168700 Malus domestica HOM05D004149 ORTHO05D005028 8.3e-62 241.1 219 56.2
Glyma.14G194500 Glycine max HOM05D004149 ORTHO05D005028 1.1e-61 240.7 250 52.4
Psat7g245760 Pisum sativum HOM05D004149 ORTHO05D005028 1.1e-61 240.7 224 55.4
AL5G26480 Arabidopsis lyrata HOM05D004149 ORTHO05D005028 2.4e-61 239.6 208 58.2
TPR.G13346 Trifolium pratense HOM05D004149 ORTHO05D005028 2.4e-61 239.6 220 55.5
Zm00001eb368380 Zea mays HOM05D004149 ORTHO05D005028 2.4e-61 239.6 220 55.0
Manes.09G107600 Manihot esculenta HOM05D004149 ORTHO05D005028 3.1e-61 239.2 203 61.6
Phvul.008G260400 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 3.1e-61 239.2 254 50.0
FvH4_6g11300 Fragaria vesca HOM05D004149 ORTHO05D005028 4.1e-61 238.8 230 54.3
FAN14G0231 Fragaria x ananassa HOM05D004149 ORTHO05D005028 4.1e-61 238.8 230 54.3
FAN14G3883 Fragaria x ananassa HOM05D004149 ORTHO05D005028 4.1e-61 238.8 230 54.3
Cpa.g.sc112.1 Carica papaya HOM05D004149 ORTHO05D005028 5.3e-61 238.4 173 64.7
Cfa011711 Carpinus fangiana HOM05D004149 ORTHO05D005028 9.1e-61 237.7 167 68.9
FAN05G2859 Fragaria x ananassa HOM05D004149 ORTHO05D005028 9.1e-61 237.7 230 53.5
Lj3g0002740 Lotus japonicus HOM05D004149 ORTHO05D005028 9.1e-61 237.7 218 55.0
RcHm_v2.0_Chr3g0462841 Rosa chinensis HOM05D004149 ORTHO05D005028 2.0e-60 236.5 228 54.8
Zm00001eb351750 Zea mays HOM05D004149 ORTHO05D005028 2.0e-60 236.5 250 51.6
Atru.chr3.4194 Acer truncatum HOM05D004149 ORTHO05D005028 3.5e-60 235.7 160 68.1
Medtr4g015610 Medicago truncatula HOM05D004149 ORTHO05D005028 3.5e-60 235.7 222 56.3
Sp5g14550 Schrenkiella parvula HOM05D004149 ORTHO05D005028 5.9e-60 235.0 221 52.9
HPP92_017934 Vanilla planifolia HOM05D004149 ORTHO05D005028 1.3e-59 233.8 246 52.8
FAN09G2001 Fragaria x ananassa HOM05D004149 ORTHO05D005028 3.8e-59 232.3 230 52.6
Hund14286 Selenicereus undatus HOM05D004149 ORTHO05D005028 1.1e-58 230.7 230 53.9
Os05g0467300 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 2.7e-57 226.1 260 47.3
BcaC04g19825 Brassica carinata HOM05D004149 ORTHO05D005028 3.6e-57 225.7 189 57.7
SHI31752 Sapria himalayana HOM05D004149 ORTHO05D005028 3.6e-57 225.7 241 51.9
SEGI_37457 Sequoiadendron giganteum HOM05D004149 ORTHO05D005028 6.1e-57 224.9 215 53.0
CiPaw.14G058300 Carya illinoinensis HOM05D004149 ORTHO05D005028 3.0e-56 222.6 197 58.9
Dinv14507 Davidia involucrata HOM05D011585 ORTHO05D005028 4.5e-52 208.8 161 67.1
Dinv03100 Davidia involucrata HOM05D004149 ORTHO05D005028 5.9e-52 208.4 142 70.4
MBI15_g14842_MAGBIO Magnolia biondii HOM05D004149 ORTHO05D005028 3.8e-51 205.7 144 69.4
FAN11G2604 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.2e-49 200.7 281 43.4
Peaxi162Scf00170g00124 Petunia axillaris HOM05D004149 ORTHO05D005028 1.6e-49 200.3 147 67.3
Actinidia29092 Actinidia chinensis HOM05D004149 ORTHO05D005028 6.8e-48 194.9 221 52.9
AUR62030494 Chenopodium quinoa HOM05D004149 ORTHO05D005028 7.5e-47 191.4 148 63.5
AUR62030801 Chenopodium quinoa HOM05D004149 ORTHO05D005028 9.8e-47 191.0 240 48.3
Ca_05615_v3 Cicer arietinum L. HOM05D004149 ORTHO05D005028 1.4e-45 187.2 131 67.2
CSS0016200 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 7.8e-44 181.4 130 66.9
FAN21G1905 Fragaria x ananassa HOM05D004149 ORTHO05D005028 8.6e-43 177.9 142 60.6
Psat7g245800 Pisum sativum HOM05D004149 ORTHO05D005028 6.1e-41 171.8 127 63.0
SMO358G0328 Selaginella moellendorffii HOM05D004149 ORTHO05D005028 4.4e-39 165.6 148 52.0
Ciclev10013383m.g Citrus clementina HOM05D004149 ORTHO05D005028 4.9e-38 162.2 149 52.3
Carub.0005s1339 Capsella rubella HOM05D004149 ORTHO05D005028 6.4e-38 161.8 123 61.0
FAN02G4186 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.1e-34 151.0 230 41.3
Solyc09g005590.3 Solanum lycopersicum HOM05D004149 ORTHO05D005028 4.1e-29 132.5 99 64.6
Atru.chr8.2258 Acer truncatum HOM05D004149 ORTHO05D005028 1.2e-28 131.0 100 63.0
vmacro20289 Vaccinium macrocarpon HOM05D004149 ORTHO05D005028 1.6e-28 130.6 131 57.3
MD03G1067500 Malus domestica HOM05D004149 ORTHO05D005028 1.4e-24 117.5 99 62.6
Aqoxy2G00865 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 1.3e-22 110.9 193 36.3
MD04G1155500 Malus domestica HOM05D004149 ORTHO05D005028 1.2e-20 104.4 112 50.0
Sed0020125 Sechium edule HOM05D004149 ORTHO05D005028 1.0e-19 101.3 225 31.6
Cre14.g616950 Chlamydomonas reinhardtii HOM05D004149 ORTHO05D005028 3.1e-16 89.7 123 38.2
Solyc09g005580.4 Solanum lycopersicum HOM05D004149 ORTHO05D005028 2.0e-15 87.0 98 51.0
C07p23840 Brassica napus HOM05D004149 ORTHO05D005028 3.4e-15 86.3 73 53.4
PRCOL_00001680 Prasinoderma coloniale HOM05D004149 ORTHO05D005028 1.7e-14 84.0 128 36.7
CBR_g34707 Chara braunii HOM05D004149 ORTHO05D005028 3.8e-14 82.8 114 36.8
MSTRG.19005 Avicennia marina HOM05D004149 ORTHO05D005028 9.3e-13 78.2 86 50.0
GSVIVG01030787001 Vitis vinifera HOM05D004149 ORTHO05D005028 5.1e-11 72.4 85 48.2
GSVIVG01032328001 Vitis vinifera HOM05D004149 ORTHO05D005028 5.1e-11 72.4 85 47.1
GSVIVG01000345001 Vitis vinifera HOM05D000200 ORTHO05D011629 6.6e-11 72.0 83 48.2
BcaB01g01543 Brassica carinata HOM05D004149 ORTHO05D039425 7.3e-10 68.6 80 45.0
MCO12G475 Micromonas commoda HOM05D004149 ORTHO05D005028 9.6e-10 68.2 125 32.0
BcaC02g09351 Brassica carinata HOM05D004149 ORTHO05D094654 3.6e-09 66.2 69 43.5
BcaB06g29604 Brassica carinata HOM05D004149 ORTHO05D039425 2.9e-06 56.6 56 46.4


User provided reference genes

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