Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-31 139.4 94 100.0
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 2.8e-24 115.2 94 89.4
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 2.8e-24 115.2 94 89.4
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 6.2e-24 114.0 94 89.4
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-20 102.8 93 61.3
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 7.1e-20 100.5 93 78.5
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 7.1e-20 100.5 93 78.5
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 2.7e-19 98.6 93 78.5
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 3.1e-15 85.1 82 70.7
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 3.1e-15 85.1 82 70.7
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 3.1e-15 85.1 85 50.6
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 5.3e-15 84.3 82 69.5
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 5.3e-15 84.3 84 54.8
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.5e-14 82.8 86 52.3
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.5e-14 82.8 86 52.3
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 2.6e-14 82.0 84 73.8
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 7.7e-14 80.5 84 52.4
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.3e-13 79.7 86 51.2
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.2e-13 79.0 84 65.5
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 2.9e-13 78.6 85 68.2
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 2.9e-13 78.6 85 68.2
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 6.5e-13 77.4 84 57.1
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 8.5e-13 77.0 86 51.2
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 8.5e-13 77.0 86 51.2
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 8.5e-13 77.0 86 51.2
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 8.5e-13 77.0 86 51.2
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 8.5e-13 77.0 86 51.2
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 8.5e-13 77.0 86 51.2
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 8.5e-13 77.0 86 51.2
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 8.5e-13 77.0 86 51.2
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.1e-12 76.6 84 50.0
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.1e-12 76.6 85 44.7
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 1.1e-12 76.6 85 44.7
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.1e-12 76.6 84 63.1
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.4e-12 76.3 83 49.4
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.9e-12 75.9 84 48.8
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 1.9e-12 75.9 85 44.7
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 2.5e-12 75.5 83 48.2
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 2.5e-12 75.5 83 45.8
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 4.2e-12 74.7 83 47.0
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 5.5e-12 74.3 84 47.6
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 5.5e-12 74.3 82 48.8
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 5.5e-12 74.3 82 51.2
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 9.4e-12 73.6 85 44.7
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 1.2e-11 73.2 82 48.8
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.2e-11 73.2 83 44.6
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 1.2e-11 73.2 82 43.9
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.6e-11 72.8 84 46.4
Aqoxy5G00093 Aquilegia oxysepala HOM05D005842 ORTHO05D007077 1.6e-11 72.8 94 59.6
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 1.6e-11 72.8 82 47.6
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 2.1e-11 72.4 83 44.6
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 3.6e-11 71.6 86 50.0
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 3.9e-10 68.2 85 65.9
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 3.9e-10 68.2 83 63.9
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 5.1e-10 67.8 106 51.9
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 5.1e-10 67.8 106 51.9
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 5.1e-10 67.8 106 51.9
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 5.1e-10 67.8 106 51.9
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 5.1e-10 67.8 84 45.2
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 5.1e-10 67.8 80 63.8
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 5.1e-10 67.8 83 62.7
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 1.1e-09 66.6 83 61.4
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 1.1e-09 66.6 106 51.9
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 1.1e-09 66.6 92 42.4
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 1.5e-09 66.2 82 47.6
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.0e-09 65.9 83 48.2
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 2.0e-09 65.9 107 52.3
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 2.0e-09 65.9 107 52.3
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 2.5e-09 65.5 86 43.0
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 5.7e-09 64.3 83 47.0
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 5.7e-09 64.3 70 44.3
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 5.7e-09 64.3 83 43.4
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 7.4e-09 63.9 83 45.8
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 7.4e-09 63.9 83 45.8
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 7.4e-09 63.9 78 47.4
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 9.7e-09 63.5 63 52.4
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 1.3e-08 63.2 83 66.3
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 1.7e-08 62.8 89 39.3
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 1.7e-08 62.8 85 40.0
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.8e-08 62.0 78 46.2
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 4.8e-08 61.2 70 52.9
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 4.8e-08 61.2 89 41.6
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 4.8e-08 61.2 96 40.6
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 4.8e-08 61.2 78 44.9
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 6.3e-08 60.8 82 64.6
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 6.3e-08 60.8 82 64.6
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 6.3e-08 60.8 82 64.6
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 6.3e-08 60.8 82 64.6
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 6.3e-08 60.8 97 59.8
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 2.4e-07 58.9 70 60.0
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 3.1e-07 58.5 85 67.1
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 4.1e-07 58.2 68 41.2
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 5.3e-07 57.8 70 58.6
MBI07_g08902_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 9.1e-07 57.0 84 59.5
MBI07_g42320_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 1.5e-06 56.2 84 63.1
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 2.0e-06 55.8 106 45.3
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 3.4e-06 55.1 33 72.7
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 4.5e-06 54.7 124 43.5
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 5.9e-06 54.3 117 44.4
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 5.9e-06 54.3 82 58.5
TWI53G0373 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 7.7e-06 53.9 33 72.7


User provided reference genes

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