Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 5.5e-36 153.7 73 100.0
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 2.6e-25 118.2 62 85.5
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 6.3e-24 113.6 65 78.5
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 8.3e-24 113.2 62 82.3
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 1.8e-23 112.1 62 82.3
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 2.4e-23 111.7 64 81.2
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 3.1e-23 111.3 56 85.7
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 3.1e-23 111.3 62 77.4
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 3.1e-23 111.3 62 77.4
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 4.1e-23 110.9 64 78.1
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 4.1e-23 110.9 58 86.2
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 4.1e-23 110.9 58 86.2
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 9.1e-23 109.8 58 84.5
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 9.1e-23 109.8 62 75.8
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 1.2e-22 109.4 56 85.7
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 1.2e-22 109.4 56 85.7
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 2.0e-22 108.6 58 82.8
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 2.0e-22 108.6 58 82.8
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 2.7e-22 108.2 58 82.8
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 3.5e-22 107.8 58 82.8
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 3.5e-22 107.8 55 85.5
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 3.5e-22 107.8 62 74.2
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 4.5e-22 107.5 55 83.6
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 5.9e-22 107.1 61 77.0
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 5.9e-22 107.1 66 72.7
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 7.7e-22 106.7 58 81.0
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 7.7e-22 106.7 59 76.3
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 7.7e-22 106.7 59 76.3
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 1.3e-21 105.9 62 75.8
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.3e-21 105.9 64 73.4
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.7e-21 105.5 59 74.6
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.7e-21 105.5 59 74.6
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 1.7e-21 105.5 58 77.6
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 2.3e-21 105.1 58 77.6
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 2.3e-21 105.1 57 78.9
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 2.3e-21 105.1 55 83.6
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 3.8e-21 104.4 66 68.2
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 3.8e-21 104.4 61 75.4
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 5.0e-21 104.0 56 80.4
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 5.0e-21 104.0 57 78.9
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 6.6e-21 103.6 56 82.1
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 6.6e-21 103.6 56 82.1
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 6.6e-21 103.6 56 82.1
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 6.6e-21 103.6 56 82.1
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 6.6e-21 103.6 56 82.1
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 6.6e-21 103.6 64 71.9
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 6.6e-21 103.6 55 81.8
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 6.6e-21 103.6 54 81.5
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 8.6e-21 103.2 66 69.7
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 8.6e-21 103.2 54 81.5
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.1e-20 102.8 66 69.7
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 1.1e-20 102.8 66 69.7
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 1.1e-20 102.8 66 69.7
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 1.1e-20 102.8 66 69.7
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 1.1e-20 102.8 66 69.7
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 1.1e-20 102.8 66 69.7
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 1.1e-20 102.8 66 69.7
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 1.5e-20 102.4 62 72.6
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 1.5e-20 102.4 62 72.6
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 1.5e-20 102.4 54 83.3
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 1.9e-20 102.1 62 74.2
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 1.9e-20 102.1 62 74.2
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 1.9e-20 102.1 63 69.8
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 1.9e-20 102.1 57 78.9
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 2.5e-20 101.7 59 74.6
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 2.5e-20 101.7 61 75.4
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 2.5e-20 101.7 61 75.4
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 2.5e-20 101.7 60 75.0
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 3.3e-20 101.3 59 74.6
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 3.3e-20 101.3 59 74.6
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 3.3e-20 101.3 59 74.6
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 3.3e-20 101.3 59 74.6
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 3.3e-20 101.3 59 74.6
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 3.3e-20 101.3 60 75.0
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 4.2e-20 100.9 62 71.0
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 4.2e-20 100.9 58 79.3
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 7.2e-20 100.1 55 81.8
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 7.2e-20 100.1 57 75.4
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 9.5e-20 99.8 65 66.2
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 1.2e-19 99.4 56 75.0
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 1.6e-19 99.0 59 71.2
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 1.6e-19 99.0 63 73.0
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 2.1e-19 98.6 55 78.2
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 3.6e-19 97.8 53 81.1
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 4.7e-19 97.4 52 82.7
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 2.3e-18 95.1 55 74.5
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 1.2e-17 92.8 53 75.5
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 4.4e-17 90.9 58 70.7
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 4.1e-15 84.3 62 59.7
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 5.4e-15 84.0 58 60.3
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.6e-14 82.4 56 67.9
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 2.5e-12 75.1 60 61.7
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 1.2e-11 72.8 44 75.0
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 3.6e-11 71.2 60 60.0
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 4.7e-11 70.9 58 55.2
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 1.4e-10 69.3 40 77.5
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 1.8e-10 68.9 43 69.8
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 4.4e-09 64.3 64 48.4
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 4.4e-09 64.3 64 48.4
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.3e-08 62.8 32 84.4
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 2.2e-08 62.0 39 64.1
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 8.3e-08 60.1 32 78.1
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 8.3e-08 60.1 32 78.1
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 1.4e-07 59.3 36 69.4
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 9.2e-07 56.6 54 46.3
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 4.6e-06 54.3 38 60.5


User provided reference genes

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