Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4172 Papaver somniferum HOM05D008529 ORTHO05D010219 3.0e-152 542.0 306 100.0
PSO384G4383 Papaver somniferum HOM05D008529 ORTHO05D010219 8.8e-152 540.4 306 99.3
PSO461G0064 Papaver somniferum HOM05D008529 ORTHO05D010219 8.8e-152 540.4 306 99.7
PSO063G3962 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-151 538.9 306 99.0
PSO339G5611 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-151 538.9 306 99.0
PSO478G1972 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-151 538.9 306 99.0
PSO700G0127 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-151 538.9 306 99.0
PSO832G0739 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-151 538.9 306 99.0
PSO461G0058 Papaver somniferum HOM05D008529 ORTHO05D010219 5.7e-151 537.7 306 98.7
PSO541G2562 Papaver somniferum HOM05D008529 ORTHO05D010219 9.7e-151 537.0 306 98.7
PSO782G5516 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-150 536.2 306 93.1
PSO384G0957 Papaver somniferum HOM05D008529 ORTHO05D010219 2.8e-150 535.4 306 98.4
PSO133G0069 Papaver somniferum HOM05D008529 ORTHO05D010219 3.7e-150 535.0 306 98.4
PSO017G2108 Papaver somniferum HOM05D008529 ORTHO05D010219 8.2e-150 533.9 306 94.4
PSO063G4627 Papaver somniferum HOM05D008529 ORTHO05D010219 8.2e-150 533.9 306 92.8
PSO017G2861 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-149 532.3 306 92.5
PSO210G0056 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-149 532.3 306 92.5
PSO541G6160 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-149 532.3 306 92.5
PSO832G3163 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-149 532.3 306 92.5
PSO170G2488 Papaver somniferum HOM05D008529 ORTHO05D010219 5.3e-149 531.2 306 92.2
PSO210G5199 Papaver somniferum HOM05D008529 ORTHO05D010219 5.3e-149 531.2 306 92.2
PSO210G2338 Papaver somniferum HOM05D008529 ORTHO05D010219 9.1e-149 530.4 306 92.2
PSO384G0405 Papaver somniferum HOM05D008529 ORTHO05D010219 9.1e-149 530.4 306 92.2
PSO478G2872 Papaver somniferum HOM05D008529 ORTHO05D010219 9.1e-149 530.4 306 92.2
PSO541G3973 Papaver somniferum HOM05D008529 ORTHO05D010219 1.2e-148 530.0 306 92.2
PSO675G7323 Papaver somniferum HOM05D008529 ORTHO05D010219 1.2e-148 530.0 306 92.2
PSO675G5337 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-148 528.9 306 95.1
PSO761G0228 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-148 528.9 306 91.8
PSO210G6697 Papaver somniferum HOM05D008529 ORTHO05D010219 3.5e-148 528.5 302 97.7
PSO541G0169 Papaver somniferum HOM05D008529 ORTHO05D010219 3.5e-148 528.5 306 91.8
PSO063G7383 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-146 522.3 302 93.4
PSO423G0120 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-139 499.6 292 91.8
PSO541G0799 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-138 495.7 306 86.9
PSO478G4936 Papaver somniferum HOM05D008529 ORTHO05D010219 1.0e-136 490.3 285 91.2
PSO386G0005 Papaver somniferum HOM05D008529 ORTHO05D010219 6.8e-136 487.6 283 91.5
PSO063G5131 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-127 459.1 238 99.2
PSO724G0644 Papaver somniferum HOM05D008529 ORTHO05D010219 1.3e-110 403.7 208 98.6
PSO017G3549 Papaver somniferum HOM05D008529 ORTHO05D010219 4.1e-109 398.7 209 96.7
PSO761G0531 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-101 374.0 190 98.9
PSO761G0474 Papaver somniferum HOM05D008529 ORTHO05D010219 5.4e-101 371.7 190 98.4
PSO339G4421 Papaver somniferum HOM05D008529 ORTHO05D010219 3.0e-99 365.9 187 98.4
PSO732G0541 Papaver somniferum HOM05D008529 ORTHO05D010219 4.6e-92 342.0 173 97.7
PSO478G4463 Papaver somniferum HOM05D008529 ORTHO05D010219 4.3e-74 282.3 181 82.3
PSO017G1082 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-66 256.5 166 98.8
PSO170G6704 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-65 252.3 166 87.3
PSO423G0183 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-65 252.3 166 87.3
PSO675G1768 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-65 252.3 166 87.3
PSO801G0719 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-65 252.3 166 87.3
PSO170G6734 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-58 229.9 113 98.2
PSO541G0326 Papaver somniferum HOM05D008529 ORTHO05D010219 2.8e-57 226.5 110 99.1
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.0e-14 85.1 314 24.5
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.0e-14 85.1 314 24.5
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.3e-14 84.0 314 24.2
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.3e-14 84.0 314 24.5
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.9e-14 83.6 314 24.2
RcHm_v2.0_Chr6g0260681 Rosa chinensis HOM05D008529 ORTHO05D010219 3.8e-14 83.2 315 26.3
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.5e-13 79.3 314 23.9
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 4.7e-12 76.3 323 24.8
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 4.7e-12 76.3 311 24.1
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.3e-11 73.9 317 25.9
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.5e-10 71.2 324 24.7
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-10 70.5 129 31.8
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 4.4e-10 69.7 322 25.5
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 4.4e-10 69.7 322 25.5
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 7.5e-10 68.9 298 24.2
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.8e-10 68.6 303 26.7
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.8e-10 68.6 326 24.8
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.8e-10 68.6 326 24.8
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.7e-09 67.8 297 24.9
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-09 67.4 129 29.5
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-09 67.4 129 29.5
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-09 67.4 129 29.5
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-09 67.4 129 29.5
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 2.9e-09 67.0 301 24.3
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.2e-08 63.5 317 24.0
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 3.2e-08 63.5 301 28.2
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 4.1e-08 63.2 232 25.9
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 5.4e-08 62.8 124 28.2
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 5.4e-08 62.8 124 28.2
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.2e-08 62.0 302 25.8
Rhsim01G0133600 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.2e-07 61.6 232 25.4
CiPaw.08G115400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-07 61.2 129 28.7
vmacro04017 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.6e-07 61.2 253 26.5
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 124 29.0
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 302 26.2
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 208 24.5
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 2.0e-07 60.8 303 28.1
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 2.0e-07 60.8 203 27.6
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 2.7e-07 60.5 124 28.2
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.7e-07 60.5 123 29.3
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-07 60.5 306 21.9
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-07 60.5 302 26.5
RcHm_v2.0_Chr5g0049061 Rosa chinensis HOM05D007743 ORTHO05D010219 2.7e-07 60.5 89 33.7
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 305 27.9
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 305 27.9
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 305 27.9
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 3.5e-07 60.1 303 22.8
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 124 29.0
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 209 23.4
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 230 24.8
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 209 23.4
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 233 24.9
Potri.010G014250 Populus trichocarpa HOM05D001576 ORTHO05D010219 4.6e-07 59.7 124 27.4
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.9e-07 59.3 305 27.9
CiPaw.03G181800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-07 59.3 306 23.5
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-07 59.3 230 24.8
CiPaw.14G032300 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-07 59.3 156 25.6
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-07 59.3 230 24.8
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 7.8e-07 58.9 95 32.6
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.0e-06 58.5 230 24.8
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.0e-06 58.5 209 23.0
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 1.0e-06 58.5 310 23.2
Os06g0635500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.0e-06 58.5 191 26.2
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.0e-06 58.5 313 22.0
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-06 58.5 188 25.0
vmacro07382 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.0e-06 58.5 158 27.8
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 1.3e-06 58.2 210 26.2
HanXRQChr08g0232381 Helianthus annuus HOM05D001576 ORTHO05D000401 1.3e-06 58.2 325 29.2
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.3e-06 58.2 311 23.2
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.3e-06 58.2 311 23.2
PSO339G5938 Papaver somniferum HOM05D019271 ORTHO05D013620 1.3e-06 58.2 141 27.0
SGA_v2.0_scaffold167G38458 Striga asiatica HOM05D001576 ORTHO05D000401 1.3e-06 58.2 200 26.5
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 1.7e-06 57.8 219 26.0
Rhsim09G0056800 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.7e-06 57.8 232 23.3
RcHm_v2.0_Chr2g0144051 Rosa chinensis HOM05D007743 ORTHO05D010219 1.7e-06 57.8 89 32.6
CiPaw.05G086200 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-06 57.4 152 27.0
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.3e-06 57.4 288 22.6
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 2.3e-06 57.4 131 27.5
CiPaw.03G175800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-06 57.0 198 26.3
CiPaw.13G033200 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-06 57.0 152 27.0
CiPaw.13G160200 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-06 57.0 152 27.0
FvH4_4g12912 Fragaria vesca HOM05D007743 ORTHO05D004645 2.9e-06 57.0 303 23.1
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 2.9e-06 57.0 308 23.4
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 2.9e-06 57.0 138 26.1
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 2.9e-06 57.0 299 22.7
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 3.9e-06 56.6 126 26.2
CiPaw.02G131900 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.0e-06 56.2 152 27.0
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.0e-06 56.2 183 26.2
FvH4_7g00330 Fragaria vesca HOM05D003861 ORTHO05D003172 5.0e-06 56.2 214 24.8
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 6.6e-06 55.8 235 23.8
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 6.6e-06 55.8 159 25.2
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 132 25.8
CiPaw.15G067200 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 234 26.5
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 237 24.1
CiPaw.16G006000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 128 25.8
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 6.6e-06 55.8 311 22.8
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.6e-06 55.8 310 23.9
Os06g0660650 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 6.6e-06 55.8 103 30.1
QL02p057958 Quercus lobata HOM05D001576 ORTHO05D000401 6.6e-06 55.8 301 28.9
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 8.6e-06 55.5 159 25.2
CiPaw.01G110200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 199 24.6
CiPaw.02G091600 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 235 26.8
FvH4_3g23932 Fragaria vesca HOM05D011010 ORTHO05D012519 8.6e-06 55.5 243 23.9
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 8.6e-06 55.5 189 24.3


User provided reference genes

Program Settings