Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 2.5e-186 655.2 318 100.0
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 2.9e-174 615.1 318 95.0
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 1.7e-113 413.3 325 63.4
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 1.6e-108 396.7 326 60.1
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 1.5e-106 390.2 327 59.0
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 2.0e-106 389.8 319 61.8
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.9e-105 386.0 324 60.8
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 8.4e-105 384.4 328 60.4
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 3.2e-104 382.5 322 60.2
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 5.4e-104 381.7 328 59.8
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 9.3e-104 380.9 324 60.5
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 1.2e-103 380.6 329 59.9
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.1e-103 379.8 324 60.5
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 3.5e-103 379.0 328 59.1
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 7.8e-103 377.9 324 59.6
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 5.1e-102 375.2 359 53.8
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 5.1e-102 375.2 319 57.1
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 6.6e-102 374.8 324 58.3
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 1.5e-101 373.6 325 58.5
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 1.5e-101 373.6 325 57.5
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 1.9e-101 373.2 320 59.4
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 2.5e-101 372.9 325 59.4
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 3.3e-101 372.5 323 59.1
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 5.6e-101 371.7 319 57.4
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 7.3e-101 371.3 321 58.3
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 9.6e-101 370.9 320 57.8
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 2.1e-100 369.8 323 57.6
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 1.1e-99 367.5 320 57.5
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 1.4e-99 367.1 325 56.9
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 3.1e-99 365.9 324 56.8
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 6.9e-99 364.8 323 57.3
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 2.0e-98 363.2 325 57.5
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 4.5e-98 362.1 325 57.2
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 5.8e-98 361.7 325 56.6
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 5.8e-98 361.7 324 56.8
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 9.9e-98 360.9 325 56.9
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 1.3e-97 360.5 323 55.7
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 1.3e-97 360.5 341 54.8
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 1.7e-97 360.1 318 55.0
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 3.8e-97 359.0 328 57.3
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 3.8e-97 359.0 326 57.4
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 3.8e-97 359.0 325 56.0
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 4.9e-97 358.6 328 59.1
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 6.4e-97 358.2 324 57.4
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 8.4e-97 357.8 326 56.1
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 8.4e-97 357.8 280 65.4
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 3.2e-96 355.9 324 55.2
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 3.2e-96 355.9 324 56.8
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 4.2e-96 355.5 324 57.1
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 4.2e-96 355.5 326 56.7
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 7.1e-96 354.8 324 58.0
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 9.3e-96 354.4 329 55.6
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 2.1e-95 353.2 326 56.1
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.7e-95 352.8 325 55.7
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 3.5e-95 352.4 324 56.2
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 3.5e-95 352.4 323 54.8
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 4.6e-95 352.1 321 56.1
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 6.0e-95 351.7 324 56.2
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 1.0e-94 350.9 319 57.1
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 3.9e-94 349.0 331 56.5
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 6.7e-94 348.2 321 56.7
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 1.1e-93 347.4 325 55.4
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 1.9e-93 346.7 324 53.4
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 1.9e-93 346.7 371 50.1
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 2.5e-93 346.3 323 56.0
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 4.3e-93 345.5 325 54.2
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 9.6e-93 344.4 319 55.2
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 2.8e-92 342.8 323 54.5
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 6.2e-92 341.7 319 54.9
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 6.2e-92 341.7 319 54.5
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 8.1e-92 341.3 324 54.9
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 1.4e-91 340.5 319 54.9
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 1.8e-91 340.1 322 57.1
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 2.4e-91 339.7 319 56.7
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 3.1e-91 339.3 319 55.2
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 1.2e-90 337.4 316 52.2
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 1.5e-90 337.0 319 54.5
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 2.0e-90 336.7 319 54.5
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 1.3e-89 334.0 330 52.1
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 3.2e-88 329.3 294 55.1
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 5.5e-88 328.6 245 66.9
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 7.9e-87 324.7 331 52.3
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 2.3e-86 323.2 226 69.0
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 5.1e-86 322.0 328 50.9
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 4.3e-85 318.9 261 60.9
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 1.7e-81 307.0 332 51.5
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 8.4e-81 304.7 324 51.5
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 1.1e-80 304.3 336 52.7
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 3.0e-78 296.2 246 61.0
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 5.1e-78 295.4 323 50.2
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 6.9e-75 285.0 245 59.6
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 5.9e-74 282.0 318 50.0
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 1.0e-73 281.2 320 49.4
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 1.3e-73 280.8 237 57.4
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 2.5e-72 276.6 250 58.0
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 5.5e-72 275.4 323 47.4
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 2.1e-71 273.5 276 51.4
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 2.2e-68 263.5 325 46.8
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.1e-67 261.2 323 43.7
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 1.4e-67 260.8 317 46.1
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 1.8e-67 260.4 194 63.4
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 2.0e-66 256.9 248 52.8
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 4.5e-66 255.8 327 45.9
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 1.7e-65 253.8 264 50.8
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 2.7e-63 246.5 213 56.8
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 6.1e-63 245.4 314 46.5
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 6.5e-57 225.3 179 63.7
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 2.7e-55 219.9 173 61.3
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 3.9e-54 216.1 214 50.9
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 8.2e-52 208.4 179 59.2
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 4.1e-51 206.1 179 59.2
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 6.1e-47 192.2 319 37.0
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 2.6e-45 186.8 129 64.3
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.5e-42 176.4 226 45.1
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 4.2e-40 169.5 430 29.1
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 7.2e-40 168.7 139 59.0
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 4.4e-37 159.5 236 41.5
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 2.2e-36 157.1 240 38.8
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 3.7e-36 156.4 144 50.7
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 2.4e-35 153.7 152 55.9
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 4.5e-34 149.4 317 34.4
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 1.8e-27 127.5 119 54.6
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 9.2e-27 125.2 178 42.7
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 2.0e-18 97.4 61 68.9
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 3.6e-15 86.7 66 63.6
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 3.7e-12 76.6 51 66.7
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 2.7e-10 70.5 61 54.1
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 1.3e-09 68.2 58 56.9
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 3.3e-08 63.5 31 83.9
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.2e-07 61.6 36 69.4
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 4.7e-07 59.7 47 59.6
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 4.7e-07 59.7 31 80.6
Duzib160G0546 Durio zibethinus HOM05D005657 ORTHO05D007104 4.0e-06 56.6 37 64.9
MCO01G569 Micromonas commoda HOM05D005657 ORTHO05D007104 8.9e-06 55.5 42 57.1


User provided reference genes

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