Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 9.2e-125 450.3 235 100.0
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 6.6e-123 444.1 235 98.3
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 7.3e-106 387.5 227 88.1
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 7.3e-106 387.5 227 88.1
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 9.6e-106 387.1 227 87.7
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 1.2e-105 386.7 229 88.2
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 1.2e-105 386.7 227 87.2
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 1.6e-105 386.3 227 89.4
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 2.1e-105 386.0 225 87.1
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 3.6e-105 385.2 223 89.7
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 4.7e-105 384.8 226 88.1
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 6.2e-105 384.4 234 84.2
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 6.2e-105 384.4 227 86.8
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 1.4e-104 383.3 227 86.8
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 1.8e-104 382.9 231 87.4
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 3.1e-104 382.1 232 86.6
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 4.0e-104 381.7 227 86.3
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 4.0e-104 381.7 227 86.3
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 4.0e-104 381.7 228 86.0
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 8.9e-104 380.6 224 88.4
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 8.9e-104 380.6 224 87.1
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 1.2e-103 380.2 223 87.9
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 2.6e-103 379.0 232 83.6
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 3.4e-103 378.6 221 90.0
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 3.4e-103 378.6 230 85.7
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 3.4e-103 378.6 225 87.1
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 3.4e-103 378.6 225 86.2
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 4.4e-103 378.3 223 88.3
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 4.4e-103 378.3 229 85.2
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 7.6e-103 377.5 226 87.2
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.3e-102 376.7 226 87.2
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.3e-102 376.7 226 87.2
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 1.3e-102 376.7 232 86.6
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 1.3e-102 376.7 235 85.5
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 2.2e-102 375.9 229 85.6
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 2.9e-102 375.6 225 86.7
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 2.9e-102 375.6 225 86.7
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 3.8e-102 375.2 229 86.5
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 4.9e-102 374.8 227 86.3
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 6.4e-102 374.4 226 86.3
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 6.4e-102 374.4 229 86.5
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 8.4e-102 374.0 229 85.2
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 8.4e-102 374.0 227 85.5
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 8.4e-102 374.0 227 85.5
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 1.1e-101 373.6 232 84.1
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 1.1e-101 373.6 226 86.3
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 1.4e-101 373.2 227 86.3
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.4e-101 373.2 227 85.0
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 1.9e-101 372.9 227 86.8
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 1.9e-101 372.9 224 86.6
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 1.9e-101 372.9 228 87.3
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 2.4e-101 372.5 227 85.5
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 2.4e-101 372.5 228 82.9
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 2.4e-101 372.5 224 85.7
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 2.4e-101 372.5 229 83.4
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 4.2e-101 371.7 227 85.9
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 4.2e-101 371.7 227 85.5
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 4.2e-101 371.7 225 82.7
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 4.2e-101 371.7 223 85.7
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 4.2e-101 371.7 225 86.7
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 5.4e-101 371.3 227 85.0
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 5.4e-101 371.3 227 85.0
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 5.4e-101 371.3 227 85.9
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 5.4e-101 371.3 229 85.2
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 5.4e-101 371.3 227 85.9
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 7.1e-101 370.9 227 85.5
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 7.1e-101 370.9 227 85.5
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 7.1e-101 370.9 214 89.7
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 7.1e-101 370.9 230 84.3
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 9.3e-101 370.5 233 83.3
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 9.3e-101 370.5 230 84.3
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 9.3e-101 370.5 227 84.6
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 1.6e-100 369.8 225 85.3
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 1.6e-100 369.8 227 85.0
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 2.1e-100 369.4 231 83.1
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 2.1e-100 369.4 224 86.6
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 2.7e-100 369.0 229 86.5
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 4.6e-100 368.2 230 82.2
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 6.0e-100 367.9 230 82.2
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 6.0e-100 367.9 225 84.9
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 6.0e-100 367.9 226 85.4
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 7.8e-100 367.5 227 85.5
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 7.8e-100 367.5 227 85.5
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 7.8e-100 367.5 227 85.5
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 1.0e-99 367.1 220 87.3
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 1.3e-99 366.7 226 83.6
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 1.7e-99 366.3 224 86.6
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 2.3e-99 365.9 224 82.1
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 3.0e-99 365.5 227 84.6
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 3.0e-99 365.5 223 85.7
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 3.0e-99 365.5 228 86.4
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 3.9e-99 365.2 228 83.3
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 5.1e-99 364.8 227 83.7
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 6.6e-99 364.4 228 82.9
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 8.7e-99 364.0 227 84.1
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 8.7e-99 364.0 232 81.5
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 1.1e-98 363.6 229 83.0
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 1.1e-98 363.6 229 82.1
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 1.1e-98 363.6 228 83.8
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.5e-98 362.5 253 77.5
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 4.3e-98 361.7 227 83.7
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 7.3e-98 360.9 229 81.2
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 9.6e-98 360.5 224 83.9
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 1.3e-97 360.1 228 81.6
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 1.3e-97 360.1 232 83.2
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 4.8e-97 358.2 232 81.5
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 8.1e-97 357.5 220 82.7
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 1.8e-96 356.3 231 80.5
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 1.5e-95 353.2 207 88.4
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 4.9e-94 348.2 221 80.5
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 1.2e-92 343.6 228 78.5
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 2.3e-91 339.3 297 65.3
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 2.0e-87 326.2 218 77.1
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 2.6e-87 325.9 233 76.8
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 1.1e-85 320.5 192 87.0
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 3.9e-83 312.0 207 76.8
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 3.3e-82 308.9 221 74.2
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 3.4e-79 298.9 220 72.7
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 1.1e-77 293.9 187 83.4
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 3.0e-75 285.8 179 84.9
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 2.5e-74 282.7 175 84.0
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 6.3e-73 278.1 191 80.6
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 5.3e-72 275.0 161 89.4
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 4.5e-71 271.9 179 79.9
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 7.6e-71 271.2 158 89.9
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 1.0e-70 270.8 158 89.2
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 1.7e-70 270.0 158 89.2
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 5.0e-70 268.5 157 89.2
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.2e-68 263.8 186 74.2
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 2.1e-68 263.1 194 76.3
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 1.9e-66 256.5 161 84.5
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 1.6e-60 236.9 160 78.1
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 7.9e-52 208.0 124 88.7
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 1.4e-48 197.2 161 70.2
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 9.7e-42 174.5 110 86.4
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 3.7e-41 172.6 102 89.2
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 1.1e-40 171.0 103 87.4
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.2e-34 151.0 158 55.7
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.0e-31 140.2 88 86.4
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 2.1e-28 130.2 79 78.5
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 5.2e-27 125.6 206 38.8
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 2.9e-22 109.8 57 91.2
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 5.6e-21 105.5 78 71.8
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 4.7e-20 102.4 63 81.0
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 7.8e-15 85.1 65 63.1
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 3.0e-14 83.2 66 65.2
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 2.6e-10 70.1 57 59.6


User provided reference genes

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