Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3798 Papaver somniferum HOM05D001952 ORTHO05D005047 6.7e-171 604.0 315 100.0
PSO339G4598 Papaver somniferum HOM05D001952 ORTHO05D005047 1.7e-166 589.3 315 97.5
Aqoxy7G02906 Aquilegia oxysepala HOM05D001952 ORTHO05D005047 1.3e-121 440.3 315 72.1
TAR633G1943 Trochodendron aralioides HOM05D001952 ORTHO05D005047 4.8e-121 438.3 315 71.1
CSS0010121 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 7.7e-119 431.0 303 72.9
CSS0043642 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 6.5e-118 427.9 315 70.5
Hma1.2p1_0063F.1_g034440 Hydrangea macrophylla HOM05D001952 ORTHO05D005047 4.2e-117 425.2 312 70.8
Actinidia38268 Actinidia chinensis HOM05D001952 ORTHO05D005047 7.2e-117 424.5 313 70.6
TWI38G1551 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 7.2e-117 424.5 315 71.1
Actinidia03051 Actinidia chinensis HOM05D001952 ORTHO05D005047 9.5e-117 424.1 302 72.8
PSO339G2303 Papaver somniferum HOM05D001952 ORTHO05D005047 1.6e-116 423.3 316 69.9
Rhsim03G0124200 Rhododendron simsii HOM05D001952 ORTHO05D005047 2.1e-116 422.9 302 71.5
Rhsim09G0040900 Rhododendron simsii HOM05D001952 ORTHO05D005047 4.7e-116 421.8 302 71.2
TAR623G1191 Trochodendron aralioides HOM05D001952 ORTHO05D005047 6.1e-116 421.4 315 68.6
Nn2g10756 Nelumbo nucifera HOM05D001952 ORTHO05D005047 8.0e-116 421.0 302 71.2
SGA_v2.0_scaffold341G49359 Striga asiatica HOM05D001952 ORTHO05D005047 1.4e-115 420.2 316 70.6
Thecc.10G071300 Theobroma cacao HOM05D001952 ORTHO05D005047 1.4e-115 420.2 302 70.5
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 3.0e-115 419.1 315 67.6
SalBow3G3659 Salvia bowleyana HOM05D001952 ORTHO05D005047 6.8e-115 417.9 307 70.0
GSVIVG01016297001 Vitis vinifera HOM05D001952 ORTHO05D005047 6.8e-115 417.9 315 69.2
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 8.8e-115 417.5 313 69.3
RcHm_v2.0_Chr1g0363681 Rosa chinensis HOM05D001952 ORTHO05D005047 8.8e-115 417.5 315 69.5
PSO063G6730 Papaver somniferum HOM05D001952 ORTHO05D005047 1.2e-114 417.2 316 69.6
FAN10G0547 Fragaria x ananassa HOM05D001952 ORTHO05D005047 1.5e-114 416.8 315 69.5
QL08p056315 Quercus lobata HOM05D001952 ORTHO05D005047 1.5e-114 416.8 314 68.8
Ciclev10032201m.g Citrus clementina HOM05D001952 ORTHO05D005047 2.0e-114 416.4 302 70.2
FAN01G0922 Fragaria x ananassa HOM05D001952 ORTHO05D005047 2.6e-114 416.0 309 70.2
FAN03G1754 Fragaria x ananassa HOM05D001952 ORTHO05D005047 2.6e-114 416.0 315 69.2
TWI15G0762 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 3.4e-114 415.6 315 69.5
Lj1C916T4 Lonicera japonica HOM05D001952 ORTHO05D005047 7.5e-114 414.5 315 67.6
MD07G1176100 Malus domestica HOM05D001952 ORTHO05D005047 1.7e-113 413.3 313 70.0
FvH4_7g19770 Fragaria vesca HOM05D001952 ORTHO05D005047 2.2e-113 412.9 315 68.9
Sopen04g018690 Solanum pennellii HOM05D001952 ORTHO05D005047 2.2e-113 412.9 302 69.2
Prupe.8G142500 Prunus persica HOM05D001952 ORTHO05D005047 2.8e-113 412.5 315 68.9
Duzib106G0378 Durio zibethinus HOM05D001952 ORTHO05D005047 3.7e-113 412.1 302 69.2
MSTRG.8150 Avicennia marina HOM05D001952 ORTHO05D005047 8.3e-113 411.0 290 71.0
CiPaw.01G274000 Carya illinoinensis HOM05D001952 ORTHO05D005047 1.1e-112 410.6 315 68.9
THA.LOC104809877 Tarenaya hassleriana HOM05D001952 ORTHO05D005047 1.1e-112 410.6 310 68.7
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 1.8e-112 409.8 312 68.3
MSTRG.27460 Avicennia marina HOM05D001952 ORTHO05D005047 2.4e-112 409.5 302 69.5
Solyc04g049180.3 Solanum lycopersicum HOM05D001952 ORTHO05D005047 2.4e-112 409.5 302 68.9
CAN.G4.5 Capsicum annuum HOM05D001952 ORTHO05D005047 1.2e-111 407.1 302 68.2
Gohir.D10G215100 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.2e-111 407.1 310 68.7
Manes.07G104300 Manihot esculenta HOM05D001952 ORTHO05D005047 1.2e-111 407.1 315 68.3
Gorai.011G240600 Gossypium raimondii HOM05D001952 ORTHO05D005047 1.6e-111 406.8 299 69.9
Sc20g0001940 Simmondsia chinensis HOM05D001952 ORTHO05D005047 1.6e-111 406.8 302 69.2
Potri.010G220900 Populus trichocarpa HOM05D001952 ORTHO05D005047 2.0e-111 406.4 315 67.6
Lalb_Chr01g0010101 Lupinus albus HOM05D001952 ORTHO05D005047 3.5e-111 405.6 302 69.9
Hund12040 Selenicereus undatus HOM05D001952 ORTHO05D005047 3.5e-111 405.6 312 67.6
Lsat_1_v5_gn_9_68641 Lactuca sativa HOM05D001952 ORTHO05D005047 4.5e-111 405.2 315 66.0
Gohir.A10G207000 Gossypium hirsutum HOM05D001952 ORTHO05D005047 7.8e-111 404.4 310 68.1
Peaxi162Scf00272g00023 Petunia axillaris HOM05D001952 ORTHO05D005047 7.8e-111 404.4 302 67.9
CANSAT56G1702 Cannabis sativa HOM05D001952 ORTHO05D005047 1.3e-110 403.7 313 67.7
MELO3C002900.2 Cucumis melo HOM05D001952 ORTHO05D005047 2.9e-110 402.5 315 65.7
CsaV3_5G025750 Cucumis sativus L. HOM05D001952 ORTHO05D005047 5.0e-110 401.7 315 65.7
Gohir.D04G003200 Gossypium hirsutum HOM05D001952 ORTHO05D005047 5.0e-110 401.7 310 68.1
Gorai.012G004300 Gossypium raimondii HOM05D001952 ORTHO05D005047 5.0e-110 401.7 310 68.1
Migut.F02000 Erythranthe guttata HOM05D001952 ORTHO05D005047 1.9e-109 399.8 316 66.5
Potri.008G041100 Populus trichocarpa HOM05D001952 ORTHO05D005047 7.3e-109 397.9 315 67.0
PGR044G1956 Punica granatum HOM05D001952 ORTHO05D005047 7.3e-109 397.9 315 66.3
DCAR_006448 Daucus carota HOM05D001952 ORTHO05D005047 1.6e-108 396.7 352 61.9
HanXRQChr09g0246441 Helianthus annuus HOM05D001952 ORTHO05D005047 1.6e-108 396.7 313 66.5
ECA232G3999 Erigeron canadensis HOM05D001952 ORTHO05D005047 2.8e-108 396.0 313 65.2
Gohir.A05G412900 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.4e-107 393.7 310 66.8
Phvul.004G071600 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 1.4e-107 393.7 315 66.0
arahy.Tifrunner.gnm1.ann1.I356LV Arachis hypogaea HOM05D001952 ORTHO05D005047 1.8e-107 393.3 316 65.5
Eucgr.J01098 Eucalyptus grandis HOM05D001952 ORTHO05D005047 1.8e-107 393.3 315 64.8
Atru.chr12.731 Acer truncatum HOM05D001952 ORTHO05D005047 2.3e-107 392.9 312 65.4
Lj2g0017031 Lotus japonicus HOM05D001952 ORTHO05D005047 3.0e-107 392.5 315 66.0
Sed0013357 Sechium edule HOM05D001952 ORTHO05D005047 8.9e-107 391.0 315 64.4
MBI07_g41454_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 1.2e-106 390.6 312 65.1
Ah.11g040520 Amaranthus hybridus HOM05D001952 ORTHO05D005047 2.0e-106 389.8 302 66.2
vmacro07078 Vaccinium macrocarpon HOM05D001952 ORTHO05D005047 2.6e-106 389.4 315 65.7
VMungo0464G0347 Vigna mungo HOM05D001952 ORTHO05D005047 2.6e-106 389.4 315 65.1
Phvul.007G093800 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 4.4e-106 388.7 314 65.0
Sabra10G0170600 Salix brachista HOM05D001952 ORTHO05D005047 4.4e-106 388.7 350 62.6
Gorai.013G026100 Gossypium raimondii HOM05D001952 ORTHO05D005047 2.9e-105 386.0 290 67.6
Glyma.10G212100 Glycine max HOM05D001952 ORTHO05D005047 1.8e-104 383.3 302 66.2
arahy.Tifrunner.gnm1.ann1.BF0W30 Arachis hypogaea HOM05D001952 ORTHO05D005047 2.4e-104 382.9 302 66.2
Cpa.g.sc53.62 Carica papaya HOM05D001952 ORTHO05D005047 3.2e-104 382.5 302 65.6
arahy.Tifrunner.gnm1.ann1.GFW5PY Arachis hypogaea HOM05D001952 ORTHO05D005047 4.1e-104 382.1 302 65.9
COL.COLO4_23705 Corchorus olitorius HOM05D001952 ORTHO05D005047 4.1e-104 382.1 393 55.0
Glyma.16G145700 Glycine max HOM05D001952 ORTHO05D005047 9.2e-104 380.9 315 65.1
HPP92_014675 Vanilla planifolia HOM05D001952 ORTHO05D005047 1.2e-103 380.6 316 62.0
Lj5g0021726 Lotus japonicus HOM05D001952 ORTHO05D005047 2.0e-103 379.8 301 65.4
Gohir.D13G023300 Gossypium hirsutum HOM05D001952 ORTHO05D005047 2.7e-103 379.4 290 67.6
ATR0115G026 Amborella trichopoda HOM05D001952 ORTHO05D005047 3.5e-103 379.0 322 62.1
TPR.G36683 Trifolium pratense HOM05D001952 ORTHO05D005047 4.6e-103 378.6 302 64.9
Glyma.02G064500 Glycine max HOM05D001952 ORTHO05D005047 5.9e-103 378.3 315 65.7
Nitab4.5_0001352g0010 Nicotiana tabacum HOM05D001952 ORTHO05D005047 5.9e-103 378.3 318 63.8
Oeu043934.2 Olea europaea HOM05D001952 ORTHO05D005047 5.9e-103 378.3 266 70.3
Aa31LG5G18490 Aethionema arabicum HOM05D001952 ORTHO05D005047 1.3e-102 377.1 310 64.5
Medtr1g095490 Medicago truncatula HOM05D001952 ORTHO05D005047 1.3e-102 377.1 302 64.6
Psat6g185440 Pisum sativum HOM05D001952 ORTHO05D005047 1.7e-102 376.7 302 63.9
CSS0012304 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 2.3e-102 376.3 265 72.1
Carub.0003s0752 Capsella rubella HOM05D001952 ORTHO05D005047 2.3e-102 376.3 310 63.9
BcaC09g47964 Brassica carinata HOM05D001952 ORTHO05D005047 3.0e-102 375.9 302 63.9
BolC1t05516H Brassica oleracea HOM05D001952 ORTHO05D005047 3.0e-102 375.9 302 63.9
EL10Ac1g02054 Beta vulgaris HOM05D001952 ORTHO05D005047 3.9e-102 375.6 350 58.6
ClCG09G020640 Citrullus lanatus HOM05D001952 ORTHO05D005047 3.9e-102 375.6 363 57.6
TPR.G1807 Trifolium pratense HOM05D001952 ORTHO05D005047 5.0e-102 375.2 282 65.2
AT3G07950 Arabidopsis thaliana HOM05D001952 ORTHO05D005047 6.6e-102 374.8 310 64.2
AUR62036746 Chenopodium quinoa HOM05D001952 ORTHO05D005047 1.1e-101 374.0 315 63.2
Nitab4.5_0000233g0070 Nicotiana tabacum HOM05D001952 ORTHO05D005047 1.5e-101 373.6 315 62.9
AL3G19330 Arabidopsis lyrata HOM05D001952 ORTHO05D005047 1.9e-101 373.2 310 63.5
BcaB04g21262 Brassica carinata HOM05D001952 ORTHO05D005047 1.9e-101 373.2 302 63.6
Sp3g06860 Schrenkiella parvula HOM05D001952 ORTHO05D005047 1.9e-101 373.2 310 63.9
Duzib114G0604 Durio zibethinus HOM05D001952 ORTHO05D005047 4.3e-101 372.1 274 69.3
BolC5t34594H Brassica oleracea HOM05D001952 ORTHO05D005047 5.6e-101 371.7 302 63.9
Sabra08G0027900 Salix brachista HOM05D001952 ORTHO05D005047 7.3e-101 371.3 346 60.7
C05p59390 Brassica napus HOM05D001952 ORTHO05D005047 2.8e-100 369.4 310 62.6
CARHR082690 Cardamine hirsuta HOM05D001952 ORTHO05D005047 1.8e-99 366.7 310 61.9
A05p40310 Brassica napus HOM05D001952 ORTHO05D005047 4.0e-99 365.5 310 62.3
BcaB03g11556 Brassica carinata HOM05D000484 ORTHO05D005047 5.2e-99 365.2 290 64.1
CDE10G0691 Ceratophyllum demersum HOM05D001952 ORTHO05D005047 8.9e-99 364.4 315 59.4
BcaC05g29583 Brassica carinata HOM05D001952 ORTHO05D005047 1.5e-98 363.6 310 62.3
CiPaw.02G174800 Carya illinoinensis HOM05D001952 ORTHO05D005047 2.0e-98 363.2 278 67.6
Thhalv10021192m.g Eutrema salsugineum HOM05D001952 ORTHO05D005047 3.4e-98 362.5 314 62.1
Lsat_1_v5_gn_8_19940 Lactuca sativa HOM05D001952 ORTHO05D005047 3.7e-97 359.0 313 61.7
FAN06G0112 Fragaria x ananassa HOM05D001952 ORTHO05D005047 4.9e-97 358.6 263 70.0
unitig_0.g2136 Utricularia gibba HOM05D001952 ORTHO05D005047 1.1e-96 357.5 302 62.6
SEGI_02403 Sequoiadendron giganteum HOM05D001952 ORTHO05D005047 1.6e-95 353.6 304 58.9
Os07g0655400 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 1.3e-94 350.5 301 59.8
Zm00001eb110580 Zea mays HOM05D001952 ORTHO05D005047 1.1e-93 347.4 301 63.1
AUR62013854 Chenopodium quinoa HOM05D001952 ORTHO05D005047 1.2e-92 344.0 279 63.1
Os03g0358200 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 1.2e-92 344.0 294 61.2
Dinv31333 Davidia involucrata HOM05D001952 ORTHO05D005047 1.2e-90 337.4 312 60.6
Zm00001eb394380 Zea mays HOM05D001952 ORTHO05D005047 4.1e-88 328.9 282 59.6
Cc09_g01990 Coffea canephora HOM05D001952 ORTHO05D005047 3.0e-86 322.8 232 71.1
Os04g0103300 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 1.5e-82 310.5 281 55.5
Mapoly0066s0031 Marchantia polymorpha HOM05D001952 ORTHO05D005047 1.7e-81 307.0 281 52.3
Zm00001eb089590 Zea mays HOM05D001952 ORTHO05D005047 9.2e-80 301.2 281 53.4
Zm00001eb418910 Zea mays HOM05D001952 ORTHO05D005047 2.1e-79 300.1 281 53.0
ATR0559G188 Amborella trichopoda HOM05D001952 ORTHO05D005047 4.6e-79 298.9 280 54.6
Gohir.A13G024400 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.3e-78 297.4 225 66.2
AagrBONN_evm.TU.Sc2ySwM_344.4977 Anthoceros agrestis HOM05D001952 ORTHO05D005047 3.9e-78 295.8 280 52.1
unitig_736.g22520 Utricularia gibba HOM05D001952 ORTHO05D005047 9.9e-74 281.2 284 52.8
SHI07338 Sapria himalayana HOM05D001952 ORTHO05D005047 4.9e-73 278.9 276 54.3
Zm00001eb017450 Zea mays HOM05D001952 ORTHO05D005047 5.4e-72 275.4 219 63.0
Pp3c16_4780 Physcomitrium patens HOM05D001952 ORTHO05D005047 1.6e-71 273.9 297 49.8
SalBow4G0807 Salvia bowleyana HOM05D001952 ORTHO05D005047 1.3e-70 270.8 300 51.7
SMO140G0041 Selaginella moellendorffii HOM05D001952 ORTHO05D005047 1.3e-70 270.8 276 50.7
Pp3c27_5280 Physcomitrium patens HOM05D001952 ORTHO05D005047 2.5e-69 266.5 291 50.2
arahy.Tifrunner.gnm1.ann1.1JAQ89 Arachis hypogaea HOM05D001952 ORTHO05D005047 3.4e-66 256.1 209 63.6
Nn2g10413 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.3e-62 244.2 235 52.8
MBI17_g17186_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 8.7e-62 241.5 327 50.2
CBR_g52157 Chara braunii HOM05D001952 ORTHO05D005047 7.9e-55 218.4 211 51.7
Lalb_Chr19g0129631 Lupinus albus HOM05D001952 ORTHO05D005047 1.8e-54 217.2 201 59.7
Oeu052143.1 Olea europaea HOM05D001952 ORTHO05D005047 3.0e-54 216.5 150 71.3
ECA233G5952 Erigeron canadensis HOM05D001952 ORTHO05D005047 6.2e-52 208.8 194 57.7
TAR633G1124 Trochodendron aralioides HOM05D002354 ORTHO05D002469 9.0e-51 204.9 217 49.8
arahy.Tifrunner.gnm1.ann1.RZKK0D Arachis hypogaea HOM05D001952 ORTHO05D005047 1.2e-50 204.5 220 54.5
unitig_747.g21458 Utricularia gibba HOM05D001952 ORTHO05D005047 2.2e-49 200.3 187 58.8
MD01G1110300 Malus domestica HOM05D001952 ORTHO05D005047 1.1e-48 198.0 152 68.4
Cre17.g706850 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D005047 1.6e-44 184.1 288 35.8
Migut.F01769 Erythranthe guttata HOM05D001952 ORTHO05D005047 2.4e-43 180.3 153 62.1
MCO03G295 Micromonas commoda HOM05D001952 ORTHO05D005047 3.8e-33 146.4 258 34.1
MCO07G038 Micromonas commoda HOM05D001952 ORTHO05D005047 3.9e-30 136.3 322 29.5
arahy.Tifrunner.gnm1.ann1.1BY4XL Arachis hypogaea HOM05D001952 ORTHO05D005047 2.0e-26 124.0 105 61.9
Nn1g06899 Nelumbo nucifera HOM05D001952 ORTHO05D005047 3.6e-23 113.2 76 75.0
Cfa025342 Carpinus fangiana HOM05D001952 ORTHO05D005047 6.1e-23 112.5 288 29.2
PRCOL_00004972 Prasinoderma coloniale HOM05D001952 ORTHO05D005047 8.0e-23 112.1 210 33.8
arahy.Tifrunner.gnm1.ann1.PMPU7Y Arachis hypogaea HOM05D001952 ORTHO05D005047 5.7e-21 105.9 134 50.7
Ca_12760_v3 Cicer arietinum L. HOM05D001952 ORTHO05D005047 8.2e-20 102.1 117 47.9
PRCOL_00006255 Prasinoderma coloniale HOM05D000177 ORTHO05D002683 1.0e-17 95.1 295 28.8
MBI19_g20119_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 6.1e-15 85.9 189 38.1
CBR_g52155 Chara braunii HOM05D001952 ORTHO05D134355 1.2e-07 61.6 55 50.9
unitig_747.g21459 Utricularia gibba HOM05D001952 ORTHO05D005047 8.8e-06 55.5 45 62.2


User provided reference genes

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