Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 9.6e-122 440.3 236 100.0
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 3.8e-102 375.2 236 86.9
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 1.5e-50 203.8 237 47.3
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 5.0e-46 188.7 185 48.1
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 3.2e-45 186.0 186 48.4
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 3.2e-45 186.0 186 48.4
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 5.5e-45 185.3 185 47.6
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 5.5e-45 185.3 240 43.8
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 9.4e-45 184.5 237 46.4
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.6e-44 183.7 240 42.5
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 6.1e-44 181.8 240 41.7
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 2.3e-43 179.9 240 42.1
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 3.0e-43 179.5 183 45.9
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 1.5e-42 177.2 183 49.2
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 2.0e-42 176.8 183 45.9
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 3.4e-42 176.0 186 46.2
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 3.4e-42 176.0 237 41.4
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.3e-41 174.1 185 47.6
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 1.7e-41 173.7 185 43.2
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 6.3e-41 171.8 186 44.6
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 8.3e-41 171.4 184 46.2
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 4.1e-40 169.1 171 50.3
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 4.1e-40 169.1 188 46.3
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 1.2e-39 167.5 186 44.6
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 1.2e-39 167.5 173 47.4
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.6e-39 167.2 240 39.2
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 2.0e-39 166.8 175 45.7
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.7e-39 166.4 186 45.7
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 2.7e-39 166.4 186 45.7
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 3.5e-39 166.0 183 44.8
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 4.5e-39 165.6 183 43.7
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 5.9e-39 165.2 241 39.8
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 5.9e-39 165.2 184 44.0
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 1.3e-38 164.1 244 41.4
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 1.7e-38 163.7 186 47.3
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 2.3e-38 163.3 185 43.2
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 2.3e-38 163.3 242 38.4
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.9e-38 162.9 184 43.5
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.9e-38 162.9 184 43.5
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.5e-37 160.6 186 47.3
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.5e-37 160.6 175 46.3
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.5e-37 160.6 184 42.4
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.5e-37 159.8 175 45.7
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 2.5e-37 159.8 184 45.7
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.3e-37 159.1 184 42.4
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 5.6e-37 158.7 240 37.5
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 9.5e-37 157.9 171 48.5
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 2.8e-36 156.4 170 45.9
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 3.6e-36 156.0 172 46.5
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 3.6e-36 156.0 187 40.6
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 4.7e-36 155.6 183 44.3
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 2.3e-35 153.3 172 45.9
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 3.0e-35 152.9 171 39.8
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 4.0e-35 152.5 173 42.8
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 6.8e-35 151.8 187 40.1
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 6.8e-35 151.8 168 47.0
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 6.8e-35 151.8 181 44.8
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 1.2e-34 151.0 240 37.1
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 2.6e-34 149.8 175 42.3
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.6e-34 149.8 242 36.4
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 3.4e-34 149.4 166 43.4
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 9.8e-34 147.9 240 35.8
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 9.8e-34 147.9 172 43.6
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.7e-33 147.1 240 36.2
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 2.9e-33 146.4 185 43.2
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 8.3e-33 144.8 173 42.8
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.4e-32 144.1 182 39.6
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 5.4e-32 142.1 184 42.4
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 5.4e-32 142.1 263 39.9
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 9.2e-32 141.4 173 41.6
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 9.2e-32 141.4 333 30.6
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 1.2e-31 141.0 179 38.0
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 2.0e-31 140.2 179 38.5
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 2.0e-31 140.2 238 34.9
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 2.0e-31 140.2 172 39.5
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 4.6e-31 139.0 175 40.6
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 1.0e-30 137.9 240 34.2
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.0e-30 137.9 186 38.7
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 1.3e-30 137.5 186 41.4
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.3e-30 137.5 176 42.0
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 2.3e-30 136.7 185 37.8
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 3.9e-30 136.0 240 34.6
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 3.9e-30 136.0 180 38.3
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 3.9e-30 136.0 179 40.2
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.1e-29 134.4 175 40.0
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 1.1e-29 134.4 202 40.6
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 2.5e-29 133.3 175 38.3
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 8.9e-27 124.8 149 38.9
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.7e-25 120.6 192 35.9
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 2.2e-25 120.2 153 39.9
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.6e-20 104.0 106 50.0
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 3.1e-19 99.8 124 37.9
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 7.5e-18 95.1 127 42.5
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 6.4e-17 92.0 78 52.6
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 1.6e-15 87.4 93 46.2
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 2.3e-14 83.6 100 38.0
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 5.1e-14 82.4 185 28.1
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 2.5e-13 80.1 105 38.1
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 1.6e-12 77.4 85 41.2
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 6.8e-11 72.0 201 22.4
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 8.9e-11 71.6 79 44.3
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.2e-10 71.2 56 53.6
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 4.4e-10 69.3 185 25.4
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 3.7e-09 66.2 89 40.4
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 6.4e-09 65.5 100 33.0
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.7e-06 57.4 72 43.1


User provided reference genes

Program Settings