Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3670 Papaver somniferum HOM05D008360 ORTHO05D010532 1.5e-21 105.1 49 100.0
Duzib093G1186 Durio zibethinus HOM05D008360 ORTHO05D010532 4.1e-11 70.5 49 59.2
Hma1.2p1_1048F.1_g251690 Hydrangea macrophylla HOM05D008360 ORTHO05D010532 9.2e-11 69.3 49 61.2
Thecc.05G140600 Theobroma cacao HOM05D008360 ORTHO05D010532 9.2e-11 69.3 49 59.2
CiPaw.09G045700 Carya illinoinensis HOM05D008360 ORTHO05D010532 1.6e-10 68.6 49 59.2
Potri.016G038300 Populus trichocarpa HOM05D008360 ORTHO05D010532 2.0e-10 68.2 49 59.2
Duzib106G1984 Durio zibethinus HOM05D008360 ORTHO05D010532 2.7e-10 67.8 49 57.1
Nitab4.5_0002162g0190 Nicotiana tabacum HOM05D008360 ORTHO05D010532 2.7e-10 67.8 47 59.6
Migut.K00128 Erythranthe guttata HOM05D008360 ORTHO05D010532 3.5e-10 67.4 49 65.3
RcHm_v2.0_Chr3g0476891 Rosa chinensis HOM05D008360 ORTHO05D010532 3.5e-10 67.4 49 59.2
CAN.G1237.40 Capsicum annuum HOM05D008360 ORTHO05D010532 4.6e-10 67.0 49 55.1
ECA248G1201 Erigeron canadensis HOM05D001008 ORTHO05D009098 6.0e-10 66.6 47 59.6
Manes.09G007500 Manihot esculenta HOM05D008360 ORTHO05D010532 6.0e-10 66.6 49 57.1
Prupe.7G043000 Prunus persica HOM05D008360 ORTHO05D010532 7.8e-10 66.2 49 59.2
Gohir.A09G118500 Gossypium hirsutum HOM05D008360 ORTHO05D010532 2.3e-09 64.7 41 61.0
Gohir.D09G115400 Gossypium hirsutum HOM05D008360 ORTHO05D010532 2.3e-09 64.7 41 61.0
Gorai.006G133100 Gossypium raimondii HOM05D008360 ORTHO05D010532 2.3e-09 64.7 41 61.0
Manes.08G057500 Manihot esculenta HOM05D008360 ORTHO05D010532 3.0e-09 64.3 49 57.1
Potri.006G041600 Populus trichocarpa HOM05D008360 ORTHO05D010532 3.0e-09 64.3 49 55.1
AUR62031993 Chenopodium quinoa HOM05D000009 ORTHO05D000008 3.9e-09 63.9 47 57.4
RcHm_v2.0_Chr3g0476991 Rosa chinensis HOM05D008360 ORTHO05D010532 3.9e-09 63.9 45 60.0
unitig_8.g3490 Utricularia gibba HOM05D008360 ORTHO05D010532 3.9e-09 63.9 46 63.0
arahy.Tifrunner.gnm1.ann1.LHUB84 Arachis hypogaea HOM05D008360 ORTHO05D010532 5.0e-09 63.5 46 58.7
Cc06_g18840 Coffea canephora HOM05D008360 ORTHO05D010532 1.1e-08 62.4 49 55.1
COL.COLO4_37957 Corchorus olitorius HOM05D008360 ORTHO05D010532 1.1e-08 62.4 49 53.1
Dinv34381 Davidia involucrata HOM05D008360 ORTHO05D010532 1.1e-08 62.4 46 54.3
FAN09G2365 Fragaria x ananassa HOM05D008360 ORTHO05D010532 1.5e-08 62.0 46 56.5
FAN14G5043 Fragaria x ananassa HOM05D008360 ORTHO05D010532 1.5e-08 62.0 46 56.5
A09p49990 Brassica napus HOM05D008360 ORTHO05D010532 1.9e-08 61.6 52 51.9
BraA09t40449Z Brassica rapa HOM05D008360 ORTHO05D010532 1.9e-08 61.6 52 51.9
Phvul.001G125600 Phaseolus vulgaris HOM05D008360 ORTHO05D010532 1.9e-08 61.6 49 57.1
Medtr7g090260 Medicago truncatula HOM05D008360 ORTHO05D010532 3.3e-08 60.8 38 63.2
Solyc04g040000.2 Solanum lycopersicum HOM05D008360 ORTHO05D010532 3.3e-08 60.8 46 50.0
Hund24629 Selenicereus undatus HOM05D008360 ORTHO05D010532 4.3e-08 60.5 46 54.3
CARHR167260 Cardamine hirsuta HOM05D008360 ORTHO05D010532 9.5e-08 59.3 43 58.1
Aa31LG10G11990 Aethionema arabicum HOM05D008360 ORTHO05D010532 1.2e-07 58.9 49 51.0
CSS0042665 Camellia sinensis var. sinensis HOM05D008360 ORTHO05D010532 1.6e-07 58.5 46 56.5
Carub.0005s2387 Capsella rubella HOM05D008360 ORTHO05D010532 1.6e-07 58.5 43 55.8
Thhalv10006358m.g Eutrema salsugineum HOM05D008360 ORTHO05D010532 1.6e-07 58.5 37 62.2
Lj1g0003695 Lotus japonicus HOM05D008360 ORTHO05D010532 1.6e-07 58.5 36 63.9
Sabra06G0028300 Salix brachista HOM05D008360 ORTHO05D010532 1.6e-07 58.5 42 54.8
C08p32400 Brassica napus HOM05D008360 ORTHO05D010532 2.1e-07 58.2 43 55.8
BolC8t50854H Brassica oleracea HOM05D008360 ORTHO05D010532 2.1e-07 58.2 43 55.8
Lalb_Chr25g0286871 Lupinus albus HOM05D008360 ORTHO05D010532 2.1e-07 58.2 46 56.5
AL5G38550 Arabidopsis lyrata HOM05D008360 ORTHO05D010532 4.7e-07 57.0 43 53.5
AT3G57062 Arabidopsis thaliana HOM05D008360 ORTHO05D010532 4.7e-07 57.0 43 53.5
Lalb_Chr20g0110161 Lupinus albus HOM05D008360 ORTHO05D010532 6.2e-07 56.6 50 56.0
RcHm_v2.0_Chr3g0477841 Rosa chinensis HOM05D008360 ORTHO05D010532 3.1e-06 54.3 31 71.0
THA.LOC104824413 Tarenaya hassleriana HOM05D008360 ORTHO05D010532 6.8e-06 53.1 39 51.3


User provided reference genes

Program Settings