Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3644 Papaver somniferum HOM05D004449 ORTHO05D005473 8.4e-174 613.6 316 100.0
PSO339G4690 Papaver somniferum HOM05D004449 ORTHO05D005473 4.3e-162 574.7 314 93.6
Aqoxy1G00845 Aquilegia oxysepala HOM05D004449 ORTHO05D005473 1.9e-133 479.6 313 77.6
TAR623G0834 Trochodendron aralioides HOM05D004449 ORTHO05D005473 1.8e-131 473.0 306 77.8
MBI17_g08343_MAGBIO Magnolia biondii HOM05D004449 ORTHO05D005473 7.0e-128 461.1 307 75.2
QL07p038716 Quercus lobata HOM05D004449 ORTHO05D005473 2.7e-127 459.1 315 75.9
QL07p038966 Quercus lobata HOM05D004449 ORTHO05D005473 2.7e-127 459.1 315 75.9
Ciclev10012240m.g Citrus clementina HOM05D004449 ORTHO05D005473 2.3e-126 456.1 316 73.1
Cfa016611 Carpinus fangiana HOM05D004449 ORTHO05D005473 3.8e-126 455.3 307 74.9
TWI74G1045 Tripterygium wilfordii HOM05D004449 ORTHO05D005473 6.6e-126 454.5 305 74.8
Nn6g34893 Nelumbo nucifera HOM05D004449 ORTHO05D005473 1.9e-125 453.0 306 75.5
Haze_19615 Corylus avellana HOM05D004449 ORTHO05D005473 2.1e-124 449.5 303 74.3
Gohir.D04G099600 Gossypium hirsutum HOM05D004449 ORTHO05D005473 6.1e-124 448.0 316 71.8
Gorai.009G402500 Gossypium raimondii HOM05D004449 ORTHO05D005473 6.1e-124 448.0 316 71.8
GSVIVG01033847001 Vitis vinifera HOM05D004449 ORTHO05D005473 6.1e-124 448.0 278 80.2
CANSAT64G1281 Cannabis sativa HOM05D004449 ORTHO05D005473 1.4e-123 446.8 267 81.6
Gohir.A04G062600 Gossypium hirsutum HOM05D004449 ORTHO05D005473 2.3e-123 446.0 316 71.5
Sc02g0000280 Simmondsia chinensis HOM05D004449 ORTHO05D005473 3.0e-123 445.7 306 74.5
Lsat_1_v5_gn_8_77140 Lactuca sativa HOM05D004449 ORTHO05D005473 8.9e-123 444.1 302 72.8
ClCG08G005200 Citrullus lanatus HOM05D004449 ORTHO05D005473 5.7e-122 441.4 313 70.9
Lj1g0018712 Lotus japonicus HOM05D004449 ORTHO05D005473 1.3e-121 440.3 269 80.3
RcHm_v2.0_Chr3g0473801 Rosa chinensis HOM05D004449 ORTHO05D005473 1.3e-121 440.3 313 71.2
Actinidia05427 Actinidia chinensis HOM05D004449 ORTHO05D005473 2.8e-121 439.1 285 76.1
PGR042G0526 Punica granatum HOM05D004449 ORTHO05D005473 4.9e-121 438.3 279 76.3
Glyma.13G153700 Glycine max HOM05D004449 ORTHO05D005473 6.3e-121 438.0 295 74.2
CiPaw.10G010000 Carya illinoinensis HOM05D004449 ORTHO05D005473 1.1e-120 437.2 306 72.5
Medtr2g015010 Medicago truncatula HOM05D004449 ORTHO05D005473 1.1e-120 437.2 296 74.0
MD14G1023300 Malus domestica HOM05D004449 ORTHO05D005473 1.8e-120 436.4 304 71.7
TPR.G11735 Trifolium pratense HOM05D004449 ORTHO05D005473 1.8e-120 436.4 275 77.8
MD12G1036500 Malus domestica HOM05D004449 ORTHO05D005473 4.1e-120 435.3 304 71.1
vmacro21413 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 5.4e-120 434.9 286 73.4
Lalb_Chr06g0172241 Lupinus albus HOM05D004449 ORTHO05D005473 9.2e-120 434.1 308 71.4
Potri.017G124800 Populus trichocarpa HOM05D004449 ORTHO05D005473 9.2e-120 434.1 276 78.3
Ca_00406_v3 Cicer arietinum L. HOM05D004449 ORTHO05D005473 1.2e-119 433.7 275 77.8
FvH4_6g18790 Fragaria vesca HOM05D004449 ORTHO05D005473 1.2e-119 433.7 314 70.7
Hma1.2p1_0084F.1_g043840 Hydrangea macrophylla HOM05D004449 ORTHO05D005473 1.2e-119 433.7 331 69.2
Hma1.2p1_0820F.1_g223850 Hydrangea macrophylla HOM05D004449 ORTHO05D005473 1.2e-119 433.7 331 69.2
Manes.08G025500 Manihot esculenta HOM05D004449 ORTHO05D005473 1.2e-119 433.7 287 74.2
MELO3C022184.2 Cucumis melo HOM05D004449 ORTHO05D005473 1.6e-119 433.3 306 70.3
Glyma.02G054800 Glycine max HOM05D004449 ORTHO05D005473 2.0e-119 433.0 290 75.2
Potri.004G090500 Populus trichocarpa HOM05D004449 ORTHO05D005473 7.8e-119 431.0 322 70.5
Phvul.009G260700 Phaseolus vulgaris HOM05D004449 ORTHO05D005473 1.3e-118 430.3 292 72.6
Eucgr.A02663 Eucalyptus grandis HOM05D004449 ORTHO05D005473 2.3e-118 429.5 274 76.6
ECA248G0038 Erigeron canadensis HOM05D004449 ORTHO05D005473 2.9e-118 429.1 282 75.2
Thhalv10016966m.g Eutrema salsugineum HOM05D004449 ORTHO05D005473 2.9e-118 429.1 298 71.8
VMungo1309G2207 Vigna mungo HOM05D004449 ORTHO05D005473 2.9e-118 429.1 292 73.6
ATR1125G096 Amborella trichopoda HOM05D004449 ORTHO05D005473 5.0e-118 428.3 300 72.0
Sed0019477 Sechium edule HOM05D004449 ORTHO05D005473 8.6e-118 427.6 300 72.7
CSS0045328 Camellia sinensis var. sinensis HOM05D004449 ORTHO05D005473 1.5e-117 426.8 306 71.9
Nitab4.5_0006507g0050 Nicotiana tabacum HOM05D004449 ORTHO05D005473 2.5e-117 426.0 262 79.0
Peaxi162Scf00858g00311 Petunia axillaris HOM05D004449 ORTHO05D005473 2.5e-117 426.0 262 78.6
Cc06_g05800 Coffea canephora HOM05D004449 ORTHO05D005473 4.3e-117 425.2 313 70.6
Sopen05g034560 Solanum pennellii HOM05D004449 ORTHO05D005473 4.3e-117 425.2 267 76.8
MSTRG.19262 Avicennia marina HOM05D004449 ORTHO05D005473 5.6e-117 424.9 267 77.2
CAN.G694.90 Capsicum annuum HOM05D004449 ORTHO05D005473 5.6e-117 424.9 267 77.2
Solyc05g056150.4 Solanum lycopersicum HOM05D004449 ORTHO05D005473 9.5e-117 424.1 267 76.8
PGSC0003DMG400023338 Solanum tuberosum HOM05D004449 ORTHO05D005473 1.2e-116 423.7 267 76.4
FAN02G4498 Fragaria x ananassa HOM05D004449 ORTHO05D005473 2.8e-116 422.5 273 75.8
RhsimUnG0066300 Rhododendron simsii HOM05D004449 ORTHO05D005473 3.6e-116 422.2 318 68.6
vmacro04352 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 4.7e-116 421.8 308 68.2
BcaB01g03853 Brassica carinata HOM05D004449 ORTHO05D005473 8.0e-116 421.0 295 69.8
THA.LOC104804908 Tarenaya hassleriana HOM05D004449 ORTHO05D005473 1.0e-115 420.6 275 75.6
SalBow3G1569 Salvia bowleyana HOM05D004449 ORTHO05D005473 1.8e-115 419.9 292 70.5
Sp4g18450 Schrenkiella parvula HOM05D004449 ORTHO05D005473 2.3e-115 419.5 273 75.5
HanXRQChr03g0063591 Helianthus annuus HOM05D004449 ORTHO05D005473 4.0e-115 418.7 311 69.1
FAN14G0980 Fragaria x ananassa HOM05D004449 ORTHO05D005473 6.8e-115 417.9 300 69.7
Aa31LG5G21350 Aethionema arabicum HOM05D004449 ORTHO05D005473 8.9e-115 417.5 279 73.8
CDE07G1047 Ceratophyllum demersum HOM05D004449 ORTHO05D005473 8.9e-115 417.5 292 71.2
EL10Ac8g19596 Beta vulgaris HOM05D004449 ORTHO05D005473 1.5e-114 416.8 317 68.1
BcaB02g09374 Brassica carinata HOM05D004449 ORTHO05D005473 1.5e-114 416.8 283 72.4
Nitab4.5_0000582g0210 Nicotiana tabacum HOM05D004449 ORTHO05D005473 2.0e-114 416.4 267 75.7
BraA05t19914Z Brassica rapa HOM05D004449 ORTHO05D005473 3.4e-114 415.6 271 74.2
FAN05G3501 Fragaria x ananassa HOM05D004449 ORTHO05D005473 4.4e-114 415.2 300 69.3
FAN05G3651 Fragaria x ananassa HOM05D004449 ORTHO05D005473 7.5e-114 414.5 300 69.3
SalBow4G0277 Salvia bowleyana HOM05D004449 ORTHO05D005473 7.5e-114 414.5 285 70.5
AL4G32330 Arabidopsis lyrata HOM05D004449 ORTHO05D005473 9.8e-114 414.1 258 77.5
AT2G36230 Arabidopsis thaliana HOM05D004449 ORTHO05D005473 2.2e-113 412.9 298 69.5
A05p09610 Brassica napus HOM05D004449 ORTHO05D005473 2.9e-113 412.5 295 68.5
BraA03t11251Z Brassica rapa HOM05D004449 ORTHO05D005473 2.9e-113 412.5 277 73.6
Carub.0004s1799 Capsella rubella HOM05D004449 ORTHO05D005473 2.9e-113 412.5 258 77.5
BolC3t14740H Brassica oleracea HOM05D004449 ORTHO05D005473 4.9e-113 411.8 300 69.3
Migut.J01033 Erythranthe guttata HOM05D004449 ORTHO05D005473 4.9e-113 411.8 264 75.8
Nitab4.5_0004212g0050 Nicotiana tabacum HOM05D004449 ORTHO05D005473 4.9e-113 411.8 267 74.5
C03p23440 Brassica napus HOM05D004449 ORTHO05D005473 1.9e-112 409.8 300 69.7
A03p20000 Brassica napus HOM05D004449 ORTHO05D005473 4.1e-112 408.7 277 73.3
CARHR130470 Cardamine hirsuta HOM05D004449 ORTHO05D005473 1.2e-111 407.1 258 76.7
Lj2A137G26 Lonicera japonica HOM05D004449 ORTHO05D005473 1.0e-110 404.1 247 79.4
Zm00001eb287580 Zea mays HOM05D004449 ORTHO05D005473 8.6e-110 401.0 279 71.0
BolC4t22839H Brassica oleracea HOM05D004449 ORTHO05D005473 1.5e-109 400.2 301 67.1
Duzib093G2067 Durio zibethinus HOM05D004449 ORTHO05D005473 9.5e-109 397.5 316 65.8
Zm00001eb020250 Zea mays HOM05D004449 ORTHO05D005473 9.5e-109 397.5 258 74.8
Atru.chr12.1330 Acer truncatum HOM05D004449 ORTHO05D005473 1.2e-108 397.1 301 68.1
Ah.04g162190 Amaranthus hybridus HOM05D005123 ORTHO05D006532 1.2e-106 390.6 257 75.9
SHI27835 Sapria himalayana HOM05D004449 ORTHO05D005473 2.4e-104 382.9 299 62.9
HPP92_001188 Vanilla planifolia HOM05D004449 ORTHO05D005473 1.2e-103 380.6 280 67.9
Pp3c12_22840 Physcomitrium patens HOM05D004449 ORTHO05D005473 1.6e-103 380.2 283 67.5
DCAR_006449 Daucus carota HOM05D004449 ORTHO05D005473 7.8e-103 377.9 228 79.4
Rhsim07G0247400 Rhododendron simsii HOM05D004449 ORTHO05D005473 3.9e-102 375.6 378 55.8
C04p11920 Brassica napus HOM05D004449 ORTHO05D005473 5.1e-102 375.2 247 73.7
Nitab4.5_0000071g0140 Nicotiana tabacum HOM05D004449 ORTHO05D005473 5.1e-102 375.2 293 65.5
BcaC02g11725 Brassica carinata HOM05D004449 ORTHO05D005473 9.5e-101 370.9 283 67.1
AUR62036483 Chenopodium quinoa HOM05D004449 ORTHO05D005473 9.5e-101 370.9 234 76.9
CiPaw.09G014500 Carya illinoinensis HOM05D004449 ORTHO05D005473 2.8e-100 369.4 307 63.5
AagrBONN_evm.TU.Sc2ySwM_344.169 Anthoceros agrestis HOM05D004449 ORTHO05D005473 8.1e-100 367.9 277 66.1
BcaC02g11727 Brassica carinata HOM05D004449 ORTHO05D005473 6.8e-99 364.8 271 67.9
Prupe.7G109700 Prunus persica HOM05D004449 ORTHO05D005473 2.6e-98 362.8 259 69.9
Cre12.g495300 Chlamydomonas reinhardtii HOM05D004449 ORTHO05D005473 3.7e-97 359.0 261 67.4
Sabra17G0105100 Salix brachista HOM05D001392 ORTHO05D006407 1.4e-96 357.1 263 71.1
SGA_v2.0_scaffold75G24747 Striga asiatica HOM05D004449 ORTHO05D005473 4.1e-96 355.5 264 68.2
SMO271G0065 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 7.1e-96 354.8 263 68.8
Dinv21204 Davidia involucrata HOM05D004449 ORTHO05D005473 2.8e-92 342.8 259 67.6
AUR62037092 Chenopodium quinoa HOM05D004449 ORTHO05D005473 1.8e-91 340.1 251 70.1
Mapoly0011s0027 Marchantia polymorpha HOM05D004449 ORTHO05D005473 4.9e-89 332.0 292 59.2
CsaV3_5G040040 Cucumis sativus L. HOM05D004449 ORTHO05D005473 6.4e-89 331.6 247 67.2
PRCOL_00002294 Prasinoderma coloniale HOM05D004449 ORTHO05D005473 7.1e-88 328.2 261 66.7
MCO11G008 Micromonas commoda HOM05D004449 ORTHO05D005473 2.7e-87 326.2 265 59.6
BcaB02g09373 Brassica carinata HOM05D004449 ORTHO05D005473 1.1e-85 320.9 264 62.1
Thecc.05G089600 Theobroma cacao HOM05D004449 ORTHO05D005473 3.6e-84 315.8 240 68.8
VMungo0647G1368 Vigna mungo HOM05D004449 ORTHO05D005473 3.1e-83 312.8 250 67.6
Atru.chr8.1532 Acer truncatum HOM05D004449 ORTHO05D005473 6.9e-83 311.6 175 84.6
Cpa.g.sc999.2 Carica papaya HOM05D004449 ORTHO05D005473 5.8e-82 308.5 306 56.2
vmacro04351 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 5.8e-82 308.5 246 65.0
Lalb_Chr06g0172381 Lupinus albus HOM05D004449 ORTHO05D005473 5.1e-78 295.4 176 80.7
CBR_g21822 Chara braunii HOM05D004449 ORTHO05D005473 5.6e-77 292.0 281 55.2
Rhsim07G0247300 Rhododendron simsii HOM05D004449 ORTHO05D005473 2.4e-72 276.6 183 72.1
RhsimUnG0066500 Rhododendron simsii HOM05D004449 ORTHO05D005473 6.0e-71 271.9 183 71.6
ClCG08G000960 Citrullus lanatus HOM05D004449 ORTHO05D005473 4.5e-66 255.8 183 71.0
RcHm_v2.0_Chr5g0027171 Rosa chinensis HOM05D004449 ORTHO05D005473 1.2e-63 247.7 170 72.4
Oeu056880.1 Olea europaea HOM05D004449 ORTHO05D005473 4.6e-63 245.7 153 76.5
Psat1g201080 Pisum sativum HOM05D004449 ORTHO05D005473 1.1e-61 241.1 181 69.1
COL.COLO4_29729 Corchorus olitorius HOM05D004449 ORTHO05D005473 9.6e-61 238.0 140 80.7
Cfa023382 Carpinus fangiana HOM05D004449 ORTHO05D005473 4.5e-58 229.2 260 45.8
BcaC02g11729 Brassica carinata HOM05D004449 ORTHO05D005473 4.8e-52 209.1 168 64.3
arahy.Tifrunner.gnm1.ann1.1FC84E Arachis hypogaea HOM05D004449 ORTHO05D005473 1.0e-49 201.4 120 79.2
arahy.Tifrunner.gnm1.ann1.IMVN0M Arachis hypogaea HOM05D004449 ORTHO05D005473 1.0e-49 201.4 120 79.2
arahy.Tifrunner.gnm1.ann1.H91IF8 Arachis hypogaea HOM05D004449 ORTHO05D005473 2.2e-49 200.3 121 78.5
Cc11_g01850 Coffea canephora HOM05D004449 ORTHO05D005473 5.0e-49 199.1 149 67.8
arahy.Tifrunner.gnm1.ann1.L677I4 Arachis hypogaea HOM05D004449 ORTHO05D005473 1.4e-48 197.6 116 80.2
RcHm_v2.0_Chr4g0393091 Rosa chinensis HOM05D004449 ORTHO05D005473 4.5e-42 176.0 108 78.7
ECA233G4866 Erigeron canadensis HOM05D004449 ORTHO05D005473 2.9e-41 173.3 114 73.7
SMO308G0039 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 8.8e-38 161.8 142 59.2
Mapoly0100s0062 Marchantia polymorpha HOM05D004449 ORTHO05D005473 1.3e-36 157.9 131 58.0
SEGI_28293 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 2.4e-35 153.7 137 59.9
RcHm_v2.0_Chr1g0350151 Rosa chinensis HOM05D004449 ORTHO05D005473 1.3e-33 147.9 88 79.5
CDE04G3206 Ceratophyllum demersum HOM05D004449 ORTHO05D005473 2.9e-33 146.7 86 77.9
SMO164G0227 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 2.9e-33 146.7 116 63.8
unitig_8.g4306 Utricularia gibba HOM05D004449 ORTHO05D005473 1.2e-31 141.4 267 37.1
COL.COLO4_29730 Corchorus olitorius HOM05D004449 ORTHO05D005473 1.8e-30 137.5 110 66.4
CDE04G2184 Ceratophyllum demersum HOM05D004449 ORTHO05D000837 2.8e-28 130.2 191 39.8
TAR369G0358 Trochodendron aralioides HOM05D003904 ORTHO05D004378 2.0e-26 124.0 76 82.9
Os05g0400800 Oryza sativa ssp. japonica HOM05D004449 ORTHO05D005473 5.0e-25 119.4 85 67.1
SEGI_22783 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 8.0e-23 112.1 72 73.6
Rhsim07G0247200 Rhododendron simsii HOM05D004449 ORTHO05D005473 2.0e-21 107.5 71 71.8
Lalb_Chr06g0172371 Lupinus albus HOM05D004449 ORTHO05D005473 8.3e-20 102.1 70 74.3
BcaC02g11730 Brassica carinata HOM05D004449 ORTHO05D005473 2.9e-17 93.6 104 52.9
arahy.Tifrunner.gnm1.ann1.E2537D Arachis hypogaea HOM05D019151 ORTHO05D005473 1.5e-16 91.3 57 75.4
arahy.Tifrunner.gnm1.ann1.TG6NMP Arachis hypogaea HOM05D019151 ORTHO05D005473 1.5e-16 91.3 57 75.4
Rhsim09G0019600 Rhododendron simsii HOM05D004449 ORTHO05D005473 5.5e-16 89.4 70 65.7
Sabra04G0060800 Salix brachista HOM05D004449 ORTHO05D005473 2.7e-15 87.0 197 35.0
RcHm_v2.0_Chr4g0409701 Rosa chinensis HOM05D004449 ORTHO05D005473 1.2e-10 71.6 46 73.9
SEGI_40272 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 8.0e-07 58.9 34 73.5
Aqoxy84s005 Aquilegia oxysepala HOM05D004902 ORTHO05D038539 4.0e-06 56.6 243 21.0


User provided reference genes

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