Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3589 Papaver somniferum HOM05D005212 ORTHO05D006353 3.1e-193 678.3 349 100.0
PSO339G5759 Papaver somniferum HOM05D005212 ORTHO05D006353 2.4e-153 545.8 348 83.0
PSO478G2757 Papaver somniferum HOM05D005212 ORTHO05D006353 3.3e-147 525.4 348 79.0
PSO017G4317 Papaver somniferum HOM05D005212 ORTHO05D006353 4.1e-145 518.5 348 78.7
CSS0012951 Camellia sinensis var. sinensis HOM05D005212 ORTHO05D006353 1.2e-75 287.7 357 48.2
QL03p033836 Quercus lobata HOM05D005212 ORTHO05D006353 3.4e-75 286.2 311 51.4
Ciclev10017606m.g Citrus clementina HOM05D005212 ORTHO05D006353 4.5e-75 285.8 346 49.4
CiPaw.05G194300 Carya illinoinensis HOM05D005212 ORTHO05D006353 5.8e-75 285.4 358 48.3
TWI60G0083 Tripterygium wilfordii HOM05D005212 ORTHO05D006353 4.9e-74 282.3 357 48.5
Lalb_Chr07g0187701 Lupinus albus HOM05D005212 ORTHO05D006353 6.4e-74 282.0 358 47.8
Nn3g18288 Nelumbo nucifera HOM05D005212 ORTHO05D006353 1.1e-73 281.2 311 50.8
Ciclev10028815m.g Citrus clementina HOM05D005212 ORTHO05D006353 2.4e-73 280.0 362 46.7
Prupe.1G329700 Prunus persica HOM05D005212 ORTHO05D006353 2.1e-72 276.9 357 45.4
Prupe.8G002300 Prunus persica HOM05D005212 ORTHO05D006353 3.0e-71 273.1 357 44.5
Manes.17G080300 Manihot esculenta HOM05D005212 ORTHO05D006353 6.7e-71 271.9 357 45.9
Atru.chr12.1198 Acer truncatum HOM05D005212 ORTHO05D006353 1.1e-70 271.2 318 48.7
Lj4g0012207 Lotus japonicus HOM05D005212 ORTHO05D006353 1.5e-70 270.8 359 46.8
Sp4g26600 Schrenkiella parvula HOM05D005212 ORTHO05D006353 4.3e-70 269.2 356 44.4
PGR102G0858 Punica granatum HOM05D005212 ORTHO05D006353 1.6e-69 267.3 355 45.4
GSVIVG01011709001 Vitis vinifera HOM05D005212 ORTHO05D006353 1.6e-69 267.3 361 45.7
Thhalv10001552m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 2.1e-69 266.9 357 44.5
Gohir.A09G208525 Gossypium hirsutum HOM05D005212 ORTHO05D006353 3.7e-69 266.2 315 49.5
Potri.001G461100 Populus trichocarpa HOM05D005212 ORTHO05D006353 3.7e-69 266.2 357 46.5
Ca_24783_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 4.8e-69 265.8 358 46.6
Peaxi162Scf00723g00423 Petunia axillaris HOM05D005212 ORTHO05D006353 4.8e-69 265.8 359 44.6
Eucgr.H01942 Eucalyptus grandis HOM05D005212 ORTHO05D006353 6.2e-69 265.4 352 49.1
GSVIVG01023834001 Vitis vinifera HOM05D005212 ORTHO05D006353 1.1e-68 264.6 352 46.0
Thecc.04G190200 Theobroma cacao HOM05D005212 ORTHO05D006353 1.4e-68 264.2 214 61.2
THA.LOC104816387 Tarenaya hassleriana HOM05D005212 ORTHO05D006353 1.8e-68 263.8 357 43.7
Gohir.D09G202000 Gossypium hirsutum HOM05D005212 ORTHO05D006353 2.4e-68 263.5 311 48.6
MD16G1023100 Malus domestica HOM05D005212 ORTHO05D006353 4.0e-68 262.7 260 52.7
RcHm_v2.0_Chr4g0443611 Rosa chinensis HOM05D005212 ORTHO05D006353 5.3e-68 262.3 311 49.2
Gorai.013G143600 Gossypium raimondii HOM05D005212 ORTHO05D006353 6.9e-68 261.9 214 59.3
Migut.E00446 Erythranthe guttata HOM05D005212 ORTHO05D006353 9.0e-68 261.5 347 45.8
Gohir.D13G128200 Gossypium hirsutum HOM05D005212 ORTHO05D006353 9.0e-68 261.5 214 59.3
Gorai.006G225800 Gossypium raimondii HOM05D005212 ORTHO05D006353 9.0e-68 261.5 214 59.3
CAN.G458.6 Capsicum annuum HOM05D005212 ORTHO05D006353 1.2e-67 261.2 357 44.3
EL10Ac9g21945 Beta vulgaris HOM05D005212 ORTHO05D006353 1.5e-67 260.8 351 45.0
BraA04t18796Z Brassica rapa HOM05D000073 ORTHO05D000033 2.0e-67 260.4 333 45.3
Solyc04g007850.3 Solanum lycopersicum HOM05D005212 ORTHO05D006353 3.4e-67 259.6 357 43.7
Aqoxy7G01425 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 4.5e-67 259.2 358 46.6
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 4.5e-67 259.2 359 43.2
BcaB06g29383 Brassica carinata HOM05D005212 ORTHO05D006353 7.6e-67 258.5 261 50.6
Duzib268G0887 Durio zibethinus HOM05D005212 ORTHO05D006353 7.6e-67 258.5 357 44.0
Sopen04g002980 Solanum pennellii HOM05D005212 ORTHO05D006353 7.6e-67 258.5 357 43.7
FvH4_4g34100 Fragaria vesca HOM05D005212 ORTHO05D006353 9.9e-67 258.1 310 48.4
Duzib151G1103 Durio zibethinus HOM05D005212 ORTHO05D006353 1.3e-66 257.7 311 48.2
AL4G43530 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 1.7e-66 257.3 359 45.1
Sc10g0005560 Simmondsia chinensis HOM05D005212 ORTHO05D006353 1.7e-66 257.3 310 49.0
Sabra16G0312600 Salix brachista HOM05D005212 ORTHO05D006353 2.9e-66 256.5 360 45.3
BcaC02g07097 Brassica carinata HOM05D005212 ORTHO05D006353 4.9e-66 255.8 359 42.9
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 4.9e-66 255.8 359 42.9
AT2G44510 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 6.4e-66 255.4 362 44.8
BolC4t28609H Brassica oleracea HOM05D000073 ORTHO05D006353 1.1e-65 254.6 359 42.6
Lsat_1_v5_gn_4_8681 Lactuca sativa HOM05D005212 ORTHO05D006353 1.4e-65 254.2 261 51.3
RcHm_v2.0_Chr3g0448371 Rosa chinensis HOM05D005212 ORTHO05D006353 1.9e-65 253.8 311 48.6
CARHR139690 Cardamine hirsuta HOM05D005212 ORTHO05D006353 2.4e-65 253.4 356 42.4
Gohir.A13G124600 Gossypium hirsutum HOM05D005212 ORTHO05D006353 2.4e-65 253.4 311 47.6
Hma1.2p1_0060F.1_g032750 Hydrangea macrophylla HOM05D005212 ORTHO05D006353 3.2e-65 253.1 299 50.5
PGSC0003DMG400029477 Solanum tuberosum HOM05D005212 ORTHO05D006353 5.5e-65 252.3 214 57.5
Nitab4.5_0009115g0010 Nicotiana tabacum HOM05D005212 ORTHO05D006353 7.1e-65 251.9 311 47.3
Haze_10945 Corylus avellana HOM05D005212 ORTHO05D006353 9.3e-65 251.5 357 43.1
Carub.0004s2707 Capsella rubella HOM05D005212 ORTHO05D006353 1.2e-64 251.1 357 43.4
Medtr3g088850 Medicago truncatula HOM05D005212 ORTHO05D006353 1.2e-64 251.1 353 43.6
TPR.G18569 Trifolium pratense HOM05D005212 ORTHO05D006353 2.1e-64 250.4 358 45.3
TPR.G5141 Trifolium pratense HOM05D005212 ORTHO05D006353 2.1e-64 250.4 358 44.4
Lj3C867T4 Lonicera japonica HOM05D005212 ORTHO05D006353 3.5e-64 249.6 322 45.7
Sed0020748 Sechium edule HOM05D005212 ORTHO05D006353 6.0e-64 248.8 357 42.3
Ca_01441_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 2.3e-63 246.9 311 49.2
HanXRQChr08g0212231 Helianthus annuus HOM05D005212 ORTHO05D006353 2.3e-63 246.9 356 42.7
vmacro10659 Vaccinium macrocarpon HOM05D005212 ORTHO05D006353 3.0e-63 246.5 339 47.5
ECA233G1697 Erigeron canadensis HOM05D005212 ORTHO05D006353 8.7e-63 245.0 357 42.3
Medtr3g096970 Medicago truncatula HOM05D005212 ORTHO05D006353 8.7e-63 245.0 358 43.6
Manes.15G130900 Manihot esculenta HOM05D005212 ORTHO05D006353 1.5e-62 244.2 315 47.0
Aa31LG1G21440 Aethionema arabicum HOM05D005212 ORTHO05D006353 2.5e-62 243.4 371 42.9
Glyma.08G095400 Glycine max HOM05D005212 ORTHO05D006353 3.3e-62 243.0 215 57.7
Psat7g082520 Pisum sativum HOM05D005212 ORTHO05D006353 3.3e-62 243.0 360 43.3
Phvul.005G028500 Phaseolus vulgaris HOM05D005212 ORTHO05D006353 4.3e-62 242.7 258 51.2
Sed0012238 Sechium edule HOM05D005212 ORTHO05D006353 5.6e-62 242.3 213 54.5
MSTRG.13603 Avicennia marina HOM05D005212 ORTHO05D006353 7.4e-62 241.9 203 61.1
HanXRQChr12g0363921 Helianthus annuus HOM05D005212 ORTHO05D006353 7.4e-62 241.9 357 41.7
CANSAT01G1481 Cannabis sativa HOM05D005212 ORTHO05D006353 1.3e-61 241.1 304 47.4
SGA_v2.0_scaffold39G15210 Striga asiatica HOM05D005212 ORTHO05D006353 3.7e-61 239.6 306 46.7
Rhsim09G0094100 Rhododendron simsii HOM05D005212 ORTHO05D006353 4.8e-61 239.2 302 47.7
AUR62008760 Chenopodium quinoa HOM05D005212 ORTHO05D006353 6.9e-60 235.3 346 41.9
Dinv36246 Davidia involucrata HOM05D005212 ORTHO05D006353 2.2e-58 230.3 326 45.7
Oeu014050.1 Olea europaea HOM05D005212 ORTHO05D006353 1.1e-57 228.0 306 46.1
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 2.5e-57 226.9 317 42.0
FAN12G1848 Fragaria x ananassa HOM05D005212 ORTHO05D006353 2.5e-57 226.9 369 41.7
Oeu063592.1 Olea europaea HOM05D005212 ORTHO05D006353 3.2e-57 226.5 215 56.3
FAN17G0532 Fragaria x ananassa HOM05D005212 ORTHO05D006353 4.2e-57 226.1 227 52.4
Os03g0853900 Oryza sativa ssp. japonica HOM05D005212 ORTHO05D006353 7.1e-57 225.3 270 44.1
HPP92_020815 Vanilla planifolia HOM05D005212 ORTHO05D006353 9.3e-57 224.9 267 45.7
Ah.11g044490 Amaranthus hybridus HOM05D005212 ORTHO05D006353 2.7e-56 223.4 353 39.9
SalBow2G0696 Salvia bowleyana HOM05D005212 ORTHO05D006353 3.5e-56 223.0 311 44.1
FAN22G0397 Fragaria x ananassa HOM05D005212 ORTHO05D006353 7.9e-56 221.9 330 41.8
ATR0829G227 Amborella trichopoda HOM05D005212 ORTHO05D006353 3.0e-55 219.9 261 46.7
FAN07G0183 Fragaria x ananassa HOM05D005212 ORTHO05D006353 5.1e-55 219.2 293 44.4
DCAR_014725 Daucus carota HOM05D005212 ORTHO05D006353 1.1e-54 218.0 307 44.6
Dinv28041 Davidia involucrata HOM05D005212 ORTHO05D006353 3.3e-54 216.5 261 50.6
ClCG01G006340 Citrullus lanatus HOM05D005212 ORTHO05D006353 4.3e-54 216.1 334 40.7
Zm00001eb210590 Zea mays HOM05D005212 ORTHO05D006353 7.4e-54 215.3 372 39.0
Hund05206 Selenicereus undatus HOM05D005212 ORTHO05D006353 8.2e-53 211.8 295 44.1
VMungo1080G0912 Vigna mungo HOM05D005212 ORTHO05D006353 2.0e-51 207.2 207 53.1
BcaNung07052 Brassica carinata HOM05D005212 ORTHO05D006353 2.5e-49 200.3 256 42.2
Ca_09937_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.6e-48 197.6 213 50.7
Ca_09949_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.6e-48 197.6 213 50.7
Mapoly0006s0099 Marchantia polymorpha HOM05D005212 ORTHO05D006353 2.1e-48 197.2 224 46.4
Thhalv10014438m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 6.1e-48 195.7 248 46.8
BcaC01g05169 Brassica carinata HOM05D005212 ORTHO05D006353 1.1e-46 191.4 217 48.8
MELO3C005296.2 Cucumis melo HOM05D005212 ORTHO05D006353 1.9e-46 190.7 270 41.9
AUR62025478 Chenopodium quinoa HOM05D005212 ORTHO05D006353 8.2e-45 185.3 173 56.1
AagrBONN_evm.TU.Sc2ySwM_344.3756 Anthoceros agrestis HOM05D005212 ORTHO05D006353 1.3e-42 177.9 227 44.1
Pp3c25_10280 Physcomitrium patens HOM05D005212 ORTHO05D006353 4.2e-41 172.9 219 42.0
SMO334G0102 Selaginella moellendorffii HOM05D005212 ORTHO05D006353 5.5e-41 172.6 211 43.1
AUR62014219 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.2e-40 171.4 291 39.2
BcaB01g03308 Brassica carinata HOM05D005212 ORTHO05D006353 3.7e-37 159.8 244 40.2
Hund24107 Selenicereus undatus HOM05D005212 ORTHO05D006353 1.4e-36 157.9 128 61.7
BolC3t15307H Brassica oleracea HOM05D005212 ORTHO05D006353 6.9e-36 155.6 172 49.4
AUR62014218 Chenopodium quinoa HOM05D005212 ORTHO05D006353 9.1e-36 155.2 200 45.0
CiPaw.06G048200 Carya illinoinensis HOM05D005212 ORTHO05D006353 2.9e-34 150.2 266 40.2
Cc04_g08850 Coffea canephora HOM05D005212 ORTHO05D006353 3.6e-32 143.3 182 47.3
AL6G13400 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 6.1e-32 142.5 145 49.7
AT5G03830 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 1.8e-31 141.0 269 38.7
C03p29590 Brassica napus HOM05D005212 ORTHO05D006353 4.4e-30 136.3 177 44.1
Cc04_g08860 Coffea canephora HOM05D005212 ORTHO05D006353 9.7e-30 135.2 171 45.6
Cpa.g.sc1084.4 Carica papaya HOM05D005212 ORTHO05D006353 1.3e-29 134.8 125 54.4
AUR62018080 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.7e-29 134.4 217 37.8
COL.COLO4_35970 Corchorus olitorius HOM05D005212 ORTHO05D006353 8.2e-29 132.1 182 42.9
Cre03.g200991 Chlamydomonas reinhardtii HOM05D005212 ORTHO05D006353 1.6e-27 127.9 257 32.7
Thhalv10015472m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.6e-27 127.9 175 48.0
CDE04G0882 Ceratophyllum demersum HOM05D005212 ORTHO05D006353 3.5e-27 126.7 133 48.9
MCO05G230 Micromonas commoda HOM05D005212 ORTHO05D006353 5.9e-27 125.9 213 36.6
CBR_g30204 Chara braunii HOM05D000019 ORTHO05D000353 1.9e-25 120.9 147 44.9
AUR62014216 Chenopodium quinoa HOM05D005212 ORTHO05D006353 4.0e-23 113.2 202 38.6
Sabra11G0142300 Salix brachista HOM05D005212 ORTHO05D006353 2.2e-21 107.5 81 61.7
unitig_22.g5595 Utricularia gibba HOM05D005212 ORTHO05D006353 4.8e-21 106.3 167 40.7
unitig_22.g5596 Utricularia gibba HOM05D005212 ORTHO05D006353 3.1e-20 103.6 61 77.0
SEGI_04595 Sequoiadendron giganteum HOM05D005212 ORTHO05D006353 5.0e-18 96.3 145 41.4
Cfa023609 Carpinus fangiana HOM05D005212 ORTHO05D006353 9.4e-17 92.0 242 26.4
Peaxi162Scf00376g00010 Petunia axillaris HOM05D005212 ORTHO05D006353 1.3e-10 71.6 164 31.7
Aqoxy6G02632 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 2.3e-07 60.8 63 49.2
Ca_15863_v3 Cicer arietinum L. HOM05D000681 ORTHO05D011778 3.0e-07 60.5 58 46.6


User provided reference genes

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