Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.1e-237 826.2 409 100.0
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 6.5e-235 817.0 409 98.8
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.4e-181 639.8 409 78.0
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 8.7e-171 604.0 410 74.9
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.5e-170 603.2 394 76.9
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 3.6e-169 598.6 407 74.7
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.2e-167 593.6 409 72.1
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 2.0e-167 592.8 402 74.6
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 2.0e-167 592.8 401 74.1
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 7.6e-167 590.9 396 74.5
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.3e-166 590.1 394 75.1
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 8.4e-166 587.4 393 74.3
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 1.1e-165 587.0 407 72.7
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.4e-165 586.6 393 74.8
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 3.2e-165 585.5 414 74.2
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 4.2e-165 585.1 409 73.3
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 2.7e-164 582.4 396 74.2
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.5e-164 582.0 385 74.8
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.0e-163 580.5 409 71.4
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.0e-163 580.5 407 72.5
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 8.7e-163 577.4 354 78.8
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.5e-162 576.6 388 75.0
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.5e-162 576.6 367 76.6
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.9e-162 576.2 358 78.8
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.3e-162 575.5 409 70.9
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 5.6e-162 574.7 409 71.9
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.6e-161 573.2 409 72.1
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.1e-161 572.8 409 71.4
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.1e-161 572.8 369 75.6
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.8e-161 572.4 376 76.6
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 8.1e-161 570.9 408 69.6
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.1e-160 570.5 390 74.1
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.4e-160 569.3 396 72.0
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.4e-160 569.3 367 76.6
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 2.4e-160 569.3 409 72.4
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.4e-160 569.3 409 71.1
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.4e-160 569.3 409 70.9
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 4.0e-160 568.5 396 72.2
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.3e-160 568.2 371 77.4
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.3e-160 568.2 409 71.4
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 6.9e-160 567.8 399 70.2
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 9.0e-160 567.4 393 72.0
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 3.4e-159 565.5 403 71.5
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 4.5e-159 565.1 357 77.6
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.8e-159 564.7 371 77.1
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 7.6e-159 564.3 405 70.9
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 9.9e-159 563.9 366 76.0
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 9.9e-159 563.9 342 81.3
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.7e-158 563.1 374 76.7
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 1.7e-158 563.1 380 72.9
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 3.8e-158 562.0 395 70.6
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 6.4e-158 561.2 361 78.1
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 8.4e-158 560.8 402 69.7
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.4e-157 560.1 400 71.8
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 1.4e-157 560.1 402 70.9
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 2.4e-157 559.3 360 73.6
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.4e-157 559.3 352 77.3
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 4.2e-157 558.5 341 78.0
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 9.3e-157 557.4 402 69.7
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 9.3e-157 557.4 394 69.5
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 7.9e-156 554.3 354 76.0
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 2.3e-155 552.7 405 70.6
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 3.0e-155 552.4 362 74.0
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.9e-155 552.0 340 79.7
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 8.7e-155 550.8 340 79.4
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.7e-155 550.8 340 79.4
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.7e-155 550.8 340 79.7
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 3.3e-154 548.9 334 78.4
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 4.3e-154 548.5 402 69.2
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.6e-153 546.6 368 72.8
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.6e-153 546.6 399 67.7
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 2.1e-153 546.2 344 75.9
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 2.8e-153 545.8 349 73.9
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 3.7e-153 545.4 378 70.4
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 3.7e-153 545.4 319 82.1
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.8e-153 545.0 364 74.5
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 8.1e-153 544.3 331 77.9
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 8.1e-153 544.3 366 73.8
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 8.1e-153 544.3 366 73.8
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.1e-152 543.9 415 65.1
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.1e-152 543.9 461 62.9
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.4e-152 543.5 341 75.4
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.8e-152 543.1 331 76.7
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 4.0e-152 542.0 365 72.9
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 4.0e-152 542.0 365 72.9
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 5.3e-152 541.6 365 72.3
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 5.3e-152 541.6 346 75.4
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.2e-151 540.4 341 75.4
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 3.4e-151 538.9 341 75.7
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.3e-150 537.0 400 67.2
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 2.5e-149 532.7 422 65.9
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 2.3e-147 526.2 396 67.7
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 3.9e-147 525.4 377 67.9
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.1e-146 523.9 299 85.6
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 9.6e-146 520.8 359 71.6
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.2e-143 513.8 402 66.2
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 8.4e-142 507.7 351 71.5
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.1e-141 507.3 408 66.2
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 4.6e-140 501.9 345 74.5
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.3e-139 499.6 399 65.4
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 5.3e-136 488.4 428 61.4
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 5.3e-136 488.4 332 72.9
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 4.5e-135 485.3 354 68.1
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.3e-129 467.2 338 66.6
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.9e-125 453.4 335 63.9
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.8e-123 446.8 387 58.9
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.4e-120 436.4 317 72.6
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.0e-119 433.3 336 61.3
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.7e-118 430.3 337 65.3
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 7.2e-109 398.3 290 68.3
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 2.0e-106 390.2 283 71.0
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 3.5e-87 326.2 293 55.6
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 3.1e-83 313.2 294 53.1
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.2e-79 301.2 306 53.9
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 2.7e-79 300.1 321 46.4
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 3.6e-76 289.7 190 74.2
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 1.7e-65 254.2 181 71.8
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.8e-52 209.5 184 61.4
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 4.8e-52 209.5 130 73.1
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 5.8e-42 176.0 113 77.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.0e-33 148.7 102 69.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.2e-26 125.2 122 52.5
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 3.5e-23 113.6 128 50.0
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.3e-19 99.8 64 75.0
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.5e-18 96.7 106 48.1
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 5.9e-18 96.3 185 34.6
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 3.2e-16 90.5 62 64.5


User provided reference genes

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