Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 5.7e-262 907.1 491 100.0
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 1.3e-192 676.8 359 97.2
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.7e-67 261.2 571 39.2
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 2.9e-64 250.4 503 38.8
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.2e-62 245.0 532 37.8
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 6.3e-59 232.6 519 36.2
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.1e-58 231.9 495 37.8
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 2.0e-57 227.6 517 36.0
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 1.5e-55 221.5 516 34.7
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.8e-53 214.5 518 35.1
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 3.0e-53 213.8 537 33.1
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 1.5e-52 211.5 523 35.6
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.7e-52 209.5 554 33.9
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 7.5e-52 209.1 519 35.3
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 9.7e-52 208.8 524 35.1
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.8e-51 207.2 514 35.4
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 6.3e-51 206.1 526 33.8
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 3.1e-50 203.8 511 32.7
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 5.3e-50 203.0 379 41.4
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.0e-49 201.1 525 33.3
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 5.9e-49 199.5 558 33.5
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 1.7e-48 198.0 505 35.8
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 6.5e-48 196.1 318 46.5
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.5e-47 194.9 585 32.1
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 2.5e-47 194.1 395 38.2
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 2.1e-46 191.0 512 34.4
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 2.1e-46 191.0 529 32.9
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 3.6e-46 190.3 523 33.8
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.2e-44 185.3 529 32.9
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 2.6e-44 184.1 528 35.0
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 5.7e-44 183.0 536 33.2
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 3.1e-42 177.2 394 37.1
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.1e-42 177.2 513 32.2
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 5.9e-41 172.9 489 33.7
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 7.7e-41 172.6 255 49.8
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 7.7e-41 172.6 535 30.8
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 1.7e-40 171.4 485 32.4
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 3.8e-40 170.2 483 34.6
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 1.1e-39 168.7 483 34.6
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 2.5e-39 167.5 455 33.8
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 4.2e-39 166.8 485 34.6
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 4.2e-39 166.8 464 33.4
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 1.2e-38 165.2 399 37.1
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 1.6e-38 164.9 459 33.6
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 1.6e-38 164.9 389 34.7
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 1.6e-38 164.9 502 33.1
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 1.0e-37 162.2 473 33.2
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 1.0e-37 162.2 511 33.3
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 1.0e-37 162.2 464 33.6
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 1.4e-37 161.8 472 31.8
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 1.4e-37 161.8 388 36.6
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 6.8e-37 159.5 507 31.2
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 8.8e-37 159.1 481 32.4
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.0e-36 157.9 389 36.2
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 2.6e-36 157.5 490 31.8
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.3e-35 155.2 495 30.3
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 2.2e-35 154.5 524 30.2
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.8e-35 154.1 396 34.1
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 4.9e-35 153.3 397 32.7
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 4.9e-35 153.3 354 35.9
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.1e-34 152.1 504 31.7
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 2.4e-34 151.0 455 31.6
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 1.6e-33 148.3 351 33.9
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 1.5e-31 141.7 531 29.4
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.2e-30 138.7 526 30.4
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 4.0e-29 133.7 478 31.0
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 6.8e-29 132.9 388 31.4
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 2.6e-28 131.0 534 28.8
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 2.6e-28 131.0 382 32.2
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 4.4e-28 130.2 316 35.1
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 5.7e-28 129.8 342 36.8
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 7.5e-28 129.4 378 33.3
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 9.8e-28 129.0 339 32.2
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 1.3e-27 128.6 327 35.8
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.3e-27 128.6 377 34.0
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 1.3e-27 128.6 419 30.1
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 1.4e-26 125.2 245 40.0
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 1.6e-25 121.7 380 31.3
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 4.6e-25 120.2 326 31.6
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 4.6e-25 120.2 326 31.6
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 5.9e-25 119.8 357 30.8
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 1.7e-24 118.2 413 29.5
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.5e-23 114.4 356 32.0
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 1.6e-22 111.7 377 31.8
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 1.6e-22 111.7 299 34.8
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.8e-22 110.9 379 31.4
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.8e-22 110.9 230 37.4
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 6.2e-22 109.8 324 34.3
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 1.4e-21 108.6 319 31.7
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 6.8e-21 106.3 314 33.4
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 1.2e-20 105.5 516 26.4
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 1.2e-20 105.5 204 38.7
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 1.3e-19 102.1 423 28.1
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 1.3e-19 102.1 274 35.4
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.2e-19 101.3 364 29.7
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 2.0e-17 94.7 216 31.9
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 3.5e-17 94.0 116 50.9
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 1.3e-16 92.0 204 36.3
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 3.9e-16 90.5 386 28.5
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 5.0e-16 90.1 190 36.3
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 8.6e-16 89.4 311 28.0
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 1.1e-15 89.0 326 28.2
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 1.8e-13 81.6 296 31.8
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 2.3e-13 81.3 71 63.4
ATR0820G116 Amborella trichopoda HOM05D005512 ORTHO05D006716 6.8e-13 79.7 202 41.1
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 8.9e-13 79.3 106 45.3
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 1.7e-11 75.1 140 39.3
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 1.7e-11 75.1 209 33.5
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 2.9e-11 74.3 88 47.7
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 2.9e-11 74.3 302 25.5
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 2.4e-10 71.2 177 40.7
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 2.4e-10 71.2 188 33.5
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 3.2e-10 70.9 140 33.6
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 3.2e-10 70.9 290 30.7
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 4.1e-10 70.5 172 34.9
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 9.2e-10 69.3 172 34.3
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 3.5e-09 67.4 484 25.8
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 3.5e-09 67.4 83 51.8
Ca_08983_v3 Cicer arietinum L. HOM05D005512 ORTHO05D006716 7.8e-09 66.2 310 28.1
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 7.8e-09 66.2 140 32.9
Sc07g0005480 Simmondsia chinensis HOM05D005512 ORTHO05D006716 1.3e-08 65.5 150 37.3
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 3.9e-08 63.9 296 29.1
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 5.1e-08 63.5 224 32.1
Mapoly0016s0098 Marchantia polymorpha HOM05D005512 ORTHO05D006716 4.3e-07 60.5 87 39.1
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 1.2e-06 58.9 327 25.4
HanXRQChr14g0432701 Helianthus annuus HOM05D005512 ORTHO05D006716 4.7e-06 57.0 42 76.2


User provided reference genes

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