Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3492 Papaver somniferum HOM05D001571 ORTHO05D005985 5.7e-45 183.7 84 100.0
Dinv43509 Davidia involucrata HOM05D001571 ORTHO05D005985 2.6e-29 131.7 83 66.3
TAR633G2464 Trochodendron aralioides HOM05D001571 ORTHO05D005985 2.6e-29 131.7 83 66.3
Dinv43950 Davidia involucrata HOM05D001571 ORTHO05D005985 5.8e-29 130.6 83 67.5
vmacro22472 Vaccinium macrocarpon HOM05D001571 ORTHO05D005985 5.8e-29 130.6 83 66.3
C08p51680 Brassica napus HOM05D001571 ORTHO05D005985 9.8e-29 129.8 83 65.1
BolC8t52696H Brassica oleracea HOM05D001571 ORTHO05D005985 9.8e-29 129.8 83 65.1
CSS0017501 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D005985 1.3e-28 129.4 83 65.1
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.3e-28 129.4 83 63.9
Eucgr.K02799 Eucalyptus grandis HOM05D001571 ORTHO05D005985 1.3e-28 129.4 83 63.9
TAR636G1355 Trochodendron aralioides HOM05D001571 ORTHO05D005985 1.3e-28 129.4 83 65.1
CDE05G3587 Ceratophyllum demersum HOM05D001571 ORTHO05D005985 2.2e-28 128.6 83 62.7
AT1G05590 Arabidopsis thaliana HOM05D001571 ORTHO05D005985 2.9e-28 128.3 83 65.1
A09p67370 Brassica napus HOM05D001571 ORTHO05D005985 2.9e-28 128.3 83 63.9
BraA09t42068Z Brassica rapa HOM05D001571 ORTHO05D005985 2.9e-28 128.3 83 63.9
Cfa010693 Carpinus fangiana HOM05D001571 ORTHO05D005985 2.9e-28 128.3 83 65.1
BcaC07g42127 Brassica carinata HOM05D001571 ORTHO05D005985 3.7e-28 127.9 83 63.9
DCAR_029577 Daucus carota HOM05D001571 ORTHO05D005985 3.7e-28 127.9 83 63.9
Thhalv10007179m.g Eutrema salsugineum HOM05D001571 ORTHO05D005985 3.7e-28 127.9 83 63.9
CARHR005090 Cardamine hirsuta HOM05D001571 ORTHO05D005985 4.9e-28 127.5 83 63.9
Actinidia05834 Actinidia chinensis HOM05D001571 ORTHO05D005985 8.3e-28 126.7 83 63.9
Carub.0001s0492 Capsella rubella HOM05D001571 ORTHO05D005985 1.1e-27 126.3 83 62.7
Sp1g04440 Schrenkiella parvula HOM05D001571 ORTHO05D005985 1.1e-27 126.3 83 62.7
AL1G15490 Arabidopsis lyrata HOM05D001571 ORTHO05D005985 1.4e-27 125.9 83 63.9
HanXRQChr11g0330961 Helianthus annuus HOM05D001571 ORTHO05D005985 1.4e-27 125.9 83 62.7
Hma1.2p1_0128F.1_g059950 Hydrangea macrophylla HOM05D001571 ORTHO05D005985 1.4e-27 125.9 83 62.7
CSS0049864 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D005985 1.9e-27 125.6 83 62.7
Eucgr.K02798 Eucalyptus grandis HOM05D001571 ORTHO05D005985 1.9e-27 125.6 83 61.4
QL04p002100 Quercus lobata HOM05D001571 ORTHO05D005985 1.9e-27 125.6 83 61.4
Rhsim07G0048800 Rhododendron simsii HOM05D001571 ORTHO05D005985 1.9e-27 125.6 83 63.9
TWI09G0458 Tripterygium wilfordii HOM05D001571 ORTHO05D005985 1.9e-27 125.6 83 62.7
Manes.09G118700 Manihot esculenta HOM05D001571 ORTHO05D005985 2.4e-27 125.2 83 62.7
PGR044G1690 Punica granatum HOM05D001571 ORTHO05D005985 2.4e-27 125.2 83 61.4
CANSAT11G1700 Cannabis sativa HOM05D001571 ORTHO05D005985 4.1e-27 124.4 83 60.2
Duzib106G1030 Durio zibethinus HOM05D001571 ORTHO05D005985 4.1e-27 124.4 83 62.7
Thecc.05G252600 Theobroma cacao HOM05D001571 ORTHO05D005985 4.1e-27 124.4 83 61.4
Aqoxy2G00553 Aquilegia oxysepala HOM05D001571 ORTHO05D005985 5.4e-27 124.0 83 62.7
CiPaw.14G094400 Carya illinoinensis HOM05D001571 ORTHO05D005985 5.4e-27 124.0 83 61.4
COL.COLO4_36049 Corchorus olitorius HOM05D001571 ORTHO05D005985 5.4e-27 124.0 83 60.2
THA.LOC104826178 Tarenaya hassleriana HOM05D001571 ORTHO05D005985 5.4e-27 124.0 83 60.2
GSVIVG01006000001 Vitis vinifera HOM05D001571 ORTHO05D005985 5.4e-27 124.0 83 63.9
HanXRQChr17g0564161 Helianthus annuus HOM05D001571 ORTHO05D005985 7.0e-27 123.6 83 60.2
Hma1.2p1_0462F.1_g157970 Hydrangea macrophylla HOM05D001571 ORTHO05D005985 7.0e-27 123.6 83 61.4
Haze_03282 Corylus avellana HOM05D001571 ORTHO05D005985 9.2e-27 123.2 83 61.4
Gorai.007G264000 Gossypium raimondii HOM05D001571 ORTHO05D005985 9.2e-27 123.2 83 61.4
QL04p002107 Quercus lobata HOM05D001571 ORTHO05D005985 9.2e-27 123.2 83 60.2
Oeu020242.1 Olea europaea HOM05D001571 ORTHO05D005985 1.2e-26 122.9 83 61.4
FAN18G1426 Fragaria x ananassa HOM05D001571 ORTHO05D005985 1.6e-26 122.5 83 61.4
Sed0012300 Sechium edule HOM05D001571 ORTHO05D005985 1.6e-26 122.5 83 62.7
Gohir.A11G237200 Gossypium hirsutum HOM05D001571 ORTHO05D005985 2.0e-26 122.1 83 60.2
ClCG10G012760 Citrullus lanatus HOM05D001571 ORTHO05D005985 2.7e-26 121.7 83 60.2
Duzib177G1010 Durio zibethinus HOM05D001571 ORTHO05D005985 2.7e-26 121.7 83 61.4
RcHm_v2.0_Chr7g0241931 Rosa chinensis HOM05D001571 ORTHO05D005985 2.7e-26 121.7 83 61.4
Cpa.g.sc197.26 Carica papaya HOM05D001571 ORTHO05D005985 3.5e-26 121.3 83 61.4
Manes.10G153600 Manihot esculenta HOM05D001571 ORTHO05D005985 3.5e-26 121.3 83 60.2
SGA_v2.0_scaffold95G28760 Striga asiatica HOM05D001571 ORTHO05D005985 4.6e-26 120.9 83 60.2
Prupe.2G001000 Prunus persica HOM05D001571 ORTHO05D005985 7.8e-26 120.2 83 59.0
Migut.N01651 Erythranthe guttata HOM05D001571 ORTHO05D005985 1.0e-25 119.8 83 59.0
Oeu024944.1 Olea europaea HOM05D001571 ORTHO05D005985 1.0e-25 119.8 83 60.2
Aa31LG1G19050 Aethionema arabicum HOM05D001571 ORTHO05D005985 1.3e-25 119.4 83 57.8
FvH4_5g39620 Fragaria vesca HOM05D001571 ORTHO05D005985 1.3e-25 119.4 83 60.2
FAN08G0235 Fragaria x ananassa HOM05D001571 ORTHO05D005985 1.3e-25 119.4 83 60.2
MELO3C026977.2 Cucumis melo HOM05D001571 ORTHO05D005985 1.7e-25 119.0 83 60.2
CsaV3_3G032600 Cucumis sativus L. HOM05D001571 ORTHO05D005985 1.7e-25 119.0 83 60.2
Sc11g0009330 Simmondsia chinensis HOM05D001571 ORTHO05D005985 2.3e-25 118.6 83 60.2
Lalb_Chr01g0015731 Lupinus albus HOM05D001571 ORTHO05D005985 3.0e-25 118.2 83 60.2
Atru.chr11.2719 Acer truncatum HOM05D001571 ORTHO05D005985 3.9e-25 117.9 84 61.9
Ciclev10019509m.g Citrus clementina HOM05D001571 ORTHO05D005985 3.9e-25 117.9 83 59.0
Medtr2g062560 Medicago truncatula HOM05D001571 ORTHO05D005985 3.9e-25 117.9 83 57.8
Ciclev10033772m.g Citrus clementina HOM05D001571 ORTHO05D005985 5.0e-25 117.5 83 60.2
Migut.B01413 Erythranthe guttata HOM05D001571 ORTHO05D005985 5.0e-25 117.5 83 59.0
SalBow5G2665 Salvia bowleyana HOM05D001571 ORTHO05D005985 5.0e-25 117.5 83 54.2
AUR62023051 Chenopodium quinoa HOM05D001571 ORTHO05D005985 6.6e-25 117.1 83 56.6
TPR.G17320 Trifolium pratense HOM05D001571 ORTHO05D005985 6.6e-25 117.1 83 59.0
Potri.001G232600 Populus trichocarpa HOM05D001571 ORTHO05D005985 8.6e-25 116.7 83 59.0
Potri.001G232800 Populus trichocarpa HOM05D001571 ORTHO05D005985 8.6e-25 116.7 83 59.0
Sabra16G0139300 Salix brachista HOM05D001571 ORTHO05D005985 8.6e-25 116.7 83 59.0
Peaxi162Scf00402g00936 Petunia axillaris HOM05D001571 ORTHO05D005985 1.1e-24 116.3 83 61.4
Psat1g130120 Pisum sativum HOM05D001571 ORTHO05D005985 1.5e-24 115.9 83 57.8
Ciclev10024601m.g Citrus clementina HOM05D001571 ORTHO05D005985 1.9e-24 115.5 83 60.2
EL10Ac2g04422 Beta vulgaris HOM05D001571 ORTHO05D005985 2.5e-24 115.2 83 56.6
AUR62009370 Chenopodium quinoa HOM05D001571 ORTHO05D005985 2.5e-24 115.2 83 56.6
SalBow4G1289 Salvia bowleyana HOM05D001571 ORTHO05D005985 3.3e-24 114.8 83 57.8
MBI04_g09717_MAGBIO Magnolia biondii HOM05D001571 ORTHO05D005985 5.6e-24 114.0 83 56.6
Phvul.005G043200 Phaseolus vulgaris HOM05D001571 ORTHO05D005985 5.6e-24 114.0 83 55.4
VMungo1080G0519 Vigna mungo HOM05D001571 ORTHO05D005985 7.3e-24 113.6 83 55.4
Sopen01g033160 Solanum pennellii HOM05D001571 ORTHO05D005985 9.5e-24 113.2 83 60.2
SEGI_18608 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 1.2e-23 112.8 83 56.6
Cc02_g26730 Coffea canephora HOM05D001571 ORTHO05D005985 1.6e-23 112.5 83 55.4
HPP92_012518 Vanilla planifolia HOM05D001571 ORTHO05D005985 1.6e-23 112.5 84 57.1
PGSC0003DMG400031128 Solanum tuberosum HOM05D001571 ORTHO05D005985 2.1e-23 112.1 83 59.0
CAN.G1361.13 Capsicum annuum HOM05D001571 ORTHO05D005985 2.8e-23 111.7 83 59.0
Lsat_1_v5_gn_4_42140 Lactuca sativa HOM05D001571 ORTHO05D005985 2.8e-23 111.7 83 57.8
Nitab4.5_0000468g0240 Nicotiana tabacum HOM05D001571 ORTHO05D005985 4.7e-23 110.9 83 57.8
Cc02_g26740 Coffea canephora HOM05D001571 ORTHO05D005985 6.2e-23 110.5 83 57.8
Solyc01g081610.3 Solanum lycopersicum HOM05D001571 ORTHO05D005985 6.2e-23 110.5 83 59.0
MSTRG.4994 Avicennia marina HOM05D001571 ORTHO05D005985 1.1e-22 109.8 84 54.8
Glyma.08G159500 Glycine max HOM05D001571 ORTHO05D005985 1.1e-22 109.8 83 53.0
Nitab4.5_0007494g0020 Nicotiana tabacum HOM05D001571 ORTHO05D005985 1.1e-22 109.8 83 56.6
unitig_578.g16703 Utricularia gibba HOM05D001571 ORTHO05D005985 5.2e-22 107.5 83 53.0
DCAR_015723 Daucus carota HOM05D001571 ORTHO05D005985 8.9e-22 106.7 83 51.8
Phvul.005G045300 Phaseolus vulgaris HOM05D001571 ORTHO05D005985 1.2e-21 106.3 83 57.8
QL01p001215 Quercus lobata HOM05D001571 ORTHO05D005985 1.5e-21 105.9 66 66.7
ATR0737G027 Amborella trichopoda HOM05D001571 ORTHO05D005985 2.0e-21 105.5 83 55.4
Lalb_Chr20g0108241 Lupinus albus HOM05D001571 ORTHO05D005985 2.0e-21 105.5 84 56.0
Glyma.08G161900 Glycine max HOM05D001571 ORTHO05D005985 2.6e-21 105.1 83 56.6
SEGI_11659 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 2.6e-21 105.1 83 51.8
VMungo1080G1153 Vigna mungo HOM05D001571 ORTHO05D005985 3.4e-21 104.8 83 56.6
Cc02_g26710 Coffea canephora HOM05D001571 ORTHO05D005985 5.8e-21 104.0 83 49.4
SEGI_32337 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 9.9e-21 103.2 83 49.4
Os03g0219400 Oryza sativa ssp. japonica HOM05D001571 ORTHO05D005985 1.3e-20 102.8 75 61.3
arahy.Tifrunner.gnm1.ann1.5S024H Arachis hypogaea HOM05D001571 ORTHO05D005985 2.9e-20 101.7 83 55.4
arahy.Tifrunner.gnm1.ann1.CV6EY6 Arachis hypogaea HOM05D001571 ORTHO05D005985 2.9e-20 101.7 83 55.4
Os07g0575500 Oryza sativa ssp. japonica HOM05D001571 ORTHO05D005985 2.9e-20 101.7 83 49.4
HPP92_024828 Vanilla planifolia HOM05D001571 ORTHO05D005985 2.9e-20 101.7 82 54.9
HPP92_026632 Vanilla planifolia HOM05D001571 ORTHO05D005985 2.9e-20 101.7 82 54.9
Lj3g0011591 Lotus japonicus HOM05D001571 ORTHO05D005985 3.7e-20 101.3 83 54.2
Lj9A618T88 Lonicera japonica HOM05D001571 ORTHO05D005985 1.9e-19 99.0 108 44.4
Zm00001eb008880 Zea mays HOM05D001571 ORTHO05D005985 1.9e-19 99.0 75 58.7
Zm00001eb325280 Zea mays HOM05D001571 ORTHO05D005985 4.1e-19 97.8 83 53.0
Ca_22830_v3 Cicer arietinum L. HOM05D001571 ORTHO05D005985 5.4e-19 97.4 74 54.1
QL05p001341 Quercus lobata HOM05D001571 ORTHO05D005985 1.2e-18 96.3 66 60.6
Pp3c18_15890 Physcomitrium patens HOM05D001571 ORTHO05D005985 1.6e-18 95.9 76 53.9
Mapoly0130s0025 Marchantia polymorpha HOM05D001571 ORTHO05D005985 2.1e-18 95.5 82 50.0
SMO134G0264 Selaginella moellendorffii HOM05D001571 ORTHO05D005985 1.9e-16 89.0 84 44.0
MBI01_g29963_MAGBIO Magnolia biondii HOM05D001571 ORTHO05D005985 9.5e-16 86.7 63 58.7
MBI01_g43715_MAGBIO Magnolia biondii HOM05D001571 ORTHO05D005985 6.2e-15 84.0 66 56.1
Ah.15g093150 Amaranthus hybridus HOM05D001571 ORTHO05D005985 1.1e-14 83.2 58 60.3
CSS0028219 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D005985 9.9e-13 76.6 83 42.2
Oeu034888.1 Olea europaea HOM05D001571 ORTHO05D005985 3.0e-09 65.1 46 56.5


User provided reference genes

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