Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 2.7e-20 101.3 60 100.0
PSO339G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 7.3e-18 93.2 60 91.7
PSO339G4337 Papaver somniferum HOM05D004778 ORTHO05D005679 2.9e-14 81.3 60 81.7
PSO384G2791 Papaver somniferum HOM05D004778 ORTHO05D005679 8.3e-14 79.7 60 80.0
PSO339G1550 Papaver somniferum HOM05D004778 ORTHO05D005679 1.1e-13 79.3 60 78.3
PSO339G3914 Papaver somniferum HOM05D004778 ORTHO05D005679 3.5e-12 74.3 61 73.8
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.3e-11 72.4 60 68.3
Hma1.2p1_0152F.1_g067660 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 2.3e-11 71.6 60 66.7
Aqoxy1G00473 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 3.9e-11 70.9 60 66.7
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 3.9e-11 70.9 60 66.7
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 3.9e-11 70.9 60 66.7
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 3.9e-11 70.9 60 66.7
CANSAT78G1478 Cannabis sativa HOM05D004778 ORTHO05D005679 6.6e-11 70.1 60 71.7
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 1.5e-10 68.9 60 65.0
PSO339G2985 Papaver somniferum HOM05D004778 ORTHO05D005679 1.5e-10 68.9 59 69.5
Potri.013G057500 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.9e-10 68.6 58 67.2
TAR623G1546 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.9e-10 68.6 60 61.7
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 2.5e-10 68.2 60 65.0
Manes.08G144900 Manihot esculenta HOM05D004778 ORTHO05D005679 3.3e-10 67.8 58 65.5
PSO384G3806 Papaver somniferum HOM05D004778 ORTHO05D005679 3.3e-10 67.8 59 67.8
TWI32G0653 Tripterygium wilfordii HOM05D004778 ORTHO05D005679 5.6e-10 67.0 60 63.3
Cfa001534 Carpinus fangiana HOM05D004778 ORTHO05D005679 7.3e-10 66.6 61 67.2
Manes.09G140700 Manihot esculenta HOM05D004778 ORTHO05D005679 1.2e-09 65.9 60 63.3
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 4.7e-09 63.9 60 60.0
Sabra19G0043900 Salix brachista HOM05D004778 ORTHO05D005679 4.7e-09 63.9 61 63.9
Sabra19G0047200 Salix brachista HOM05D004778 ORTHO05D005679 4.7e-09 63.9 61 63.9
CARHR233890 Cardamine hirsuta HOM05D004778 ORTHO05D005679 6.2e-09 63.5 60 61.7
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 6.2e-09 63.5 60 60.0
AL7G26630 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 8.1e-09 63.2 60 61.7
CiPaw.14G136700 Carya illinoinensis HOM05D004778 ORTHO05D005679 8.1e-09 63.2 60 56.7
AT4G26320 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 1.1e-08 62.8 60 61.7
Cpa.g.sc119.43 Carica papaya HOM05D004778 ORTHO05D005679 1.8e-08 62.0 60 61.7
MD03G1004000 Malus domestica HOM05D004778 ORTHO05D005679 2.3e-08 61.6 61 63.9
Hma1.2p1_0589F.1_g184910 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 4.0e-08 60.8 60 58.3
Thhalv10027232m.g Eutrema salsugineum HOM05D004778 ORTHO05D005679 5.2e-08 60.5 60 56.7
Cfa009564 Carpinus fangiana HOM05D004778 ORTHO05D005679 6.8e-08 60.1 61 60.7
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 6.8e-08 60.1 60 58.3
BcaC03g14215 Brassica carinata HOM05D004778 ORTHO05D005679 8.9e-08 59.7 61 57.4
C02p15150 Brassica napus HOM05D004778 ORTHO05D005679 8.9e-08 59.7 61 57.4
BolC2t07632H Brassica oleracea HOM05D004778 ORTHO05D005679 8.9e-08 59.7 61 57.4
Duzib177G0058 Durio zibethinus HOM05D004778 ORTHO05D005679 8.9e-08 59.7 60 58.3
PGSC0003DMG400008381 Solanum tuberosum HOM05D004778 ORTHO05D005679 8.9e-08 59.7 61 62.3
PGR142G3834 Punica granatum HOM05D004778 ORTHO05D005679 2.0e-07 58.5 61 62.3
Prupe.6G003500 Prunus persica HOM05D004778 ORTHO05D005679 3.4e-07 57.8 61 59.0
Aa31LG3G12430 Aethionema arabicum HOM05D004778 ORTHO05D005679 4.4e-07 57.4 61 55.7
Aqoxy2G00513 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 4.4e-07 57.4 58 56.9
Rhsim13G0232700 Rhododendron simsii HOM05D004778 ORTHO05D005679 4.4e-07 57.4 61 57.4
Sp6g18330 Schrenkiella parvula HOM05D004778 ORTHO05D005679 4.4e-07 57.4 61 57.4
A02p09020 Brassica napus HOM05D004778 ORTHO05D005679 5.8e-07 57.0 61 55.7
BraA02t05971Z Brassica rapa HOM05D004778 ORTHO05D005679 5.8e-07 57.0 61 55.7
Potri.003G220900 Populus trichocarpa HOM05D004778 ORTHO05D005679 5.8e-07 57.0 60 56.7
AL8G32300 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 7.6e-07 56.6 61 57.4
A01p17570 Brassica napus HOM05D004778 ORTHO05D005679 7.6e-07 56.6 60 56.7
BraA01t01710Z Brassica rapa HOM05D004778 ORTHO05D005679 7.6e-07 56.6 60 56.7
COL.COLO4_36083 Corchorus olitorius HOM05D004778 ORTHO05D005679 7.6e-07 56.6 62 56.5
Gohir.D13G103100 Gossypium hirsutum HOM05D004778 ORTHO05D005679 9.9e-07 56.2 60 55.0
BcaC04g20076 Brassica carinata HOM05D004778 ORTHO05D005679 1.3e-06 55.8 61 54.1
BcaNung02429 Brassica carinata HOM05D004778 ORTHO05D005679 1.3e-06 55.8 60 53.3
A10p13910 Brassica napus HOM05D004778 ORTHO05D005679 1.3e-06 55.8 61 54.1
C09p48130 Brassica napus HOM05D004778 ORTHO05D005679 1.3e-06 55.8 61 54.1
BolC9t57665H Brassica oleracea HOM05D004778 ORTHO05D005679 1.3e-06 55.8 61 54.1
BraA10t43484Z Brassica rapa HOM05D004778 ORTHO05D005679 1.3e-06 55.8 61 54.1
Carub.0007s1462 Capsella rubella HOM05D004778 ORTHO05D005679 1.3e-06 55.8 60 55.0
Carub.0008s1702 Capsella rubella HOM05D004778 ORTHO05D005679 1.3e-06 55.8 61 57.4
Eucgr.K01501 Eucalyptus grandis HOM05D004778 ORTHO05D005679 1.3e-06 55.8 58 60.3
C07p54800 Brassica napus HOM05D004778 ORTHO05D005679 1.7e-06 55.5 60 56.7
AT5G56540 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 2.2e-06 55.1 61 55.7
BcaC09g50690 Brassica carinata HOM05D004778 ORTHO05D005679 2.2e-06 55.1 60 56.7
A03p56600 Brassica napus HOM05D004778 ORTHO05D005679 2.2e-06 55.1 60 55.0
C01p22170 Brassica napus HOM05D004778 ORTHO05D005679 2.2e-06 55.1 60 56.7
BolC1t02147H Brassica oleracea HOM05D004778 ORTHO05D005679 2.2e-06 55.1 60 56.7
CARHR270190 Cardamine hirsuta HOM05D004778 ORTHO05D005679 2.2e-06 55.1 61 57.4
BolC7t45969H Brassica oleracea HOM05D004778 ORTHO05D005679 2.9e-06 54.7 60 55.0
PGSC0003DMG400032211 Solanum tuberosum HOM05D004778 ORTHO05D005679 3.7e-06 54.3 62 53.2
PGR102G2573 Punica granatum HOM05D004778 ORTHO05D005679 4.9e-06 53.9 61 55.7
Medtr7g085780 Medicago truncatula HOM05D004778 ORTHO05D005679 6.4e-06 53.5 61 59.0
Solyc10g078580.1 Solanum lycopersicum HOM05D004778 ORTHO05D005679 6.4e-06 53.5 61 57.4
BcaB01g04406 Brassica carinata HOM05D004778 ORTHO05D005679 8.4e-06 53.1 61 54.1
BraA03t14730Z Brassica rapa HOM05D004778 ORTHO05D005679 8.4e-06 53.1 60 53.3


User provided reference genes

Program Settings