Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 0.0e+00 1348.6 668 100.0
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 0.0e+00 1243.0 668 92.2
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 5.9e-286 987.3 668 73.4
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 1.1e-268 929.9 666 68.8
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 5.1e-261 904.4 668 67.7
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 3.3e-260 901.7 668 66.9
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 6.2e-259 897.5 668 66.9
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 8.1e-259 897.1 667 67.2
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 3.3e-252 875.2 663 65.9
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 4.3e-252 874.8 669 66.2
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 2.1e-251 872.5 665 65.4
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 3.1e-250 868.6 680 64.1
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 5.8e-249 864.4 672 64.0
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 1.9e-247 859.4 667 63.7
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 9.6e-244 847.0 682 62.5
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 1.3e-243 846.7 672 62.5
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 8.1e-243 844.0 641 65.2
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 9.0e-242 840.5 677 62.5
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.2e-241 840.1 677 62.5
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 2.0e-241 839.3 657 62.9
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 2.0e-241 839.3 699 60.8
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 2.9e-240 835.5 671 63.6
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 8.4e-240 833.9 642 63.9
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 1.1e-239 833.6 678 61.2
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 1.2e-238 830.1 681 61.8
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 2.7e-238 828.9 647 63.4
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 2.7e-238 828.9 644 64.6
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 4.6e-238 828.2 646 64.4
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 1.5e-236 823.2 673 62.7
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 1.9e-236 822.8 673 61.7
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 1.9e-236 822.8 671 62.3
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 2.5e-236 822.4 670 62.1
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 2.5e-236 822.4 679 61.6
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 3.3e-236 822.0 641 64.1
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 3.3e-236 822.0 590 66.8
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 1.3e-235 820.1 643 63.8
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.8e-235 818.9 651 63.0
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 4.8e-235 818.1 670 61.8
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 1.1e-234 817.0 672 61.2
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 1.1e-234 817.0 678 60.6
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 1.4e-234 816.6 665 63.6
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 2.4e-234 815.8 647 64.1
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.0e-234 815.1 668 61.5
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 4.0e-234 815.1 660 62.4
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 5.3e-234 814.7 668 61.7
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 5.3e-234 814.7 677 61.2
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 6.9e-234 814.3 667 62.1
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 9.0e-234 813.9 663 62.0
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 2.0e-233 812.8 666 63.4
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 3.4e-233 812.0 668 62.1
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.5e-233 811.6 668 61.7
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 4.5e-233 811.6 638 63.2
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 7.6e-233 810.8 668 61.4
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 7.6e-233 810.8 615 63.7
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 7.6e-233 810.8 645 63.9
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 9.9e-233 810.4 662 61.2
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 1.7e-232 809.7 668 61.5
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 2.9e-232 808.9 668 61.1
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 3.8e-232 808.5 674 61.1
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 1.1e-231 807.0 669 61.7
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 1.1e-231 807.0 668 61.1
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 5.5e-231 804.7 653 62.8
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 5.5e-231 804.7 639 63.1
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 5.5e-231 804.7 682 60.6
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 7.1e-231 804.3 665 60.8
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 4.6e-230 801.6 669 59.8
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 1.0e-229 800.4 667 62.2
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 1.8e-229 799.7 630 65.6
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 1.1e-228 797.0 643 63.6
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 9.6e-228 793.9 649 61.6
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 4.0e-226 788.5 664 59.0
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 3.4e-225 785.4 642 61.2
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 8.4e-224 780.8 671 60.2
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 2.5e-223 779.2 664 59.9
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 3.5e-222 775.4 668 58.8
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 7.9e-222 774.2 671 58.6
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 1.8e-221 773.1 642 60.9
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 8.7e-221 770.8 660 59.2
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 1.1e-220 770.4 664 59.6
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 1.5e-220 770.0 663 58.8
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 4.3e-220 768.5 665 58.5
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 2.8e-219 765.8 663 58.2
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 2.4e-218 762.7 664 58.6
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 1.5e-217 760.0 669 57.8
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 5.9e-217 758.1 666 58.4
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 7.7e-217 757.7 666 58.3
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 5.0e-216 755.0 668 58.4
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 1.6e-214 750.0 665 57.4
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 1.0e-213 747.3 664 57.7
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 1.4e-213 746.9 670 57.2
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 5.1e-213 745.0 586 64.0
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 6.7e-213 744.6 664 57.2
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 9.7e-212 740.7 628 60.4
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 2.2e-211 739.6 646 57.0
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 2.8e-211 739.2 701 54.8
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 5.0e-208 728.4 641 58.3
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 3.6e-206 722.2 586 61.9
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.0e-205 720.7 583 62.1
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 1.9e-199 699.9 549 63.9
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 7.0e-194 681.4 613 55.5
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 1.7e-192 676.8 574 60.6
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 1.6e-177 627.1 570 55.8
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 6.4e-163 578.6 503 57.7
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 1.3e-160 570.9 690 45.9
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.2e-153 547.7 600 50.0
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 8.1e-150 535.0 513 54.8
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 1.9e-143 513.8 592 48.8
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 8.4e-139 498.4 439 56.3
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 7.6e-132 475.3 462 51.9
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 9.6e-127 458.4 665 41.5
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 1.1e-125 454.9 624 43.3
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 1.2e-121 441.4 837 36.0
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 3.0e-120 436.8 395 58.2
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 1.8e-109 401.0 399 53.4
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 4.2e-106 389.8 523 42.1
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 4.4e-87 326.6 282 58.9
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 1.4e-85 321.6 205 71.7
MCO05G006 Micromonas commoda HOM05D005051 ORTHO05D005945 1.5e-71 275.0 656 30.9
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 5.7e-71 273.1 207 66.7
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 2.9e-67 260.8 327 43.7
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 5.0e-67 260.0 211 60.7
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 4.2e-66 256.9 230 56.1
Cre10.g441100 Chlamydomonas reinhardtii HOM05D005051 ORTHO05D005945 2.4e-61 241.1 694 30.8
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 9.1e-61 239.2 406 40.1
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 1.5e-58 231.9 659 30.2
Cfa025345 Carpinus fangiana HOM05D005051 ORTHO05D005945 2.7e-52 211.1 632 28.2
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 1.2e-47 195.7 145 70.3
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 1.9e-45 188.3 172 58.1
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 6.0e-44 183.3 121 76.9
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 7.3e-42 176.4 283 40.3
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.6e-41 175.3 283 40.6
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 8.9e-40 169.5 147 56.5
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 5.4e-37 160.2 167 52.7
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 8.9e-32 142.9 161 49.7
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.2e-31 142.5 183 41.5
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 2.6e-31 141.4 106 61.3
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 1.1e-29 136.0 142 52.8
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 9.2e-29 132.9 260 38.5
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.7e-28 131.3 260 38.1
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.7e-28 131.3 260 38.1
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.0e-27 129.4 249 37.3
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.0e-27 129.4 249 37.3
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 9.6e-26 122.9 108 64.8
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 1.2e-25 122.5 175 44.0
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.1e-21 109.4 174 40.2
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.9e-21 108.6 174 40.2
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 2.4e-21 108.2 174 39.7
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 5.4e-21 107.1 174 40.2
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 3.9e-19 100.9 120 44.2
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 1.1e-18 99.4 99 58.6
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 7.3e-18 96.7 63 77.8
Lsat_1_v5_gn_5_28021 Lactuca sativa HOM05D001978 ORTHO05D048368 1.2e-12 79.3 54 63.0
Lsat_1_v5_gn_5_150541 Lactuca sativa HOM05D005051 ORTHO05D048368 2.1e-12 78.6 71 53.5
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 7.3e-10 70.1 50 62.0
Medtr6g061110 Medicago truncatula HOM05D005051 ORTHO05D000004 3.6e-09 67.8 40 75.0


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